Mycobacterium tuberculosis KZN 1435: TBMG_00446
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Entry
TBMG_00446 CDS
T00940
Name
(GenBank) alternative RNA polymerase sigma factor sigK
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mtb
Mycobacterium tuberculosis KZN 1435
Brite
KEGG Orthology (KO) [BR:
mtb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtb03021
]
TBMG_00446
Transcription machinery [BR:
mtb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TBMG_00446
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
HTH_38
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ACT23475
LinkDB
All DBs
Position
complement(534092..534655)
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AA seq
187 aa
AA seq
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MTGPPRLSSDLDALLRRVAGHDQAAFAEFYDHTKSRVYGLVMRVLRDTGYSEETTQEIYL
EVWRNASEFDSAKGSALAWLLTMAHRRAVDRVRCEQAGNQREVRYGAANVDPASDVVADL
AIAGDERRRVTECLKALTDTQRQCIELAYYGGLTYVEVSRRLAANLSTIKSRMRDALRSL
RNCLDVS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaccgccacggctgagcagcgacctggacgccctgttgcgccgggtcgctggt
cacgaccaggccgcattcgccgaattctacgaccacaccaagtcgcgggtgtatggactg
gtgatgcgggtgctgcgtgataccggctacagcgaagaaaccacccaggagatctatctt
gaggtgtggcggaacgcgtcggagtttgactccgccaaaggttccgcgttggcctggctt
ttgaccatggcccaccggcgcgctgtcgaccgagtccgttgcgagcaagccggcaaccag
cgggaagtgcgctatggtgcggccaacgtcgatcccgcgagtgacgtcgtcgccgacctg
gcgatcgccggtgatgagcggcgccgggtgaccgagtgcctcaaggcgttgaccgacacg
cagcggcagtgcatcgaactggcctactacggcgggctgacgtatgtcgaagtttcgcgg
cggttagcggccaatctgtcgaccatcaaatcccgcatgcgcgacgccctgcgcagcctg
cgcaactgcctggacgtgtcatga
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