KEGG   Mycobacterium tuberculosis KZN 1435: TBMG_00679
Entry
TBMG_00679        CDS       T00940                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta rpoB
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
mtb  Mycobacterium tuberculosis KZN 1435
Pathway
mtb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mtb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TBMG_00679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtb03021]
    TBMG_00679
   03400 DNA repair and recombination proteins [BR:mtb03400]
    TBMG_00679
Enzymes [BR:mtb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TBMG_00679
Transcription machinery [BR:mtb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     TBMG_00679
DNA repair and recombination proteins [BR:mtb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      TBMG_00679
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_1 Peptidase_M23 RnfC_N
Other DBs
NCBI-ProteinID: ACT23714
LinkDB
Position
760574..764110
AA seq 1178 aa
MLEGCILADSRQSKTAASPSPSRPQSSSNNSVPGAPNRVSFAKLREPLEVPGLLDVQTDS
FEWLIGSPRWRESAAERGDVNPVGGLEEVLYELSPIEDFSGSMSLSFSDPRFDDVKAPVD
ECKDKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLV
RSPGVYFDETIDKSTDKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKA
LGWTSEQIVERFGFSEIMRSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTLLENLF
FKEKRYDLARVGRYKVNKKLGLHVGEPITSSTLTEEDVVATIEYLVRLHEGQTTMTVPGG
VEVPVETDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLINI
RPVVAAIKEFFGTSQLSQFMYQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHY
GRMCPIETPEGPSIGLIGSLSVYARVNPFGFIETPYRKVVDGVVSDEIVYLTADEEDRHV
VAQANSPIDADGRFVEPRVLVRRKAGEVEYVPSSEVDYMDVSPRQMVSVATAMIPFLEHD
DANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVAEESGVIEEVSADYITV
MHDNGTRRTYRMRKFARSNHGTCANQCPIVDAGDRVEAGQVIADGPCTDDGEMALGKNLL
VAIMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNISDEV
LADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVP
HGESGKVIGIRVFSREDEDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILP
VEDMPFLADGTPVDIILNTHGVPRRMNIGQILETHLGWCAHSGWKVDAAKGVPDWAARLP
DELLEAQPNAIVSTPVFDGAQEAELQGLLSCTLPNRDGDVLVDADGKAMLFDGRSGEPFP
YPVTVGYMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYG
AAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSS
DGAAIELREGEDEDLERAAANLGINLSRNESASVEDLA
NT seq 3537 nt   +upstreamnt  +downstreamnt
gtgctggaaggatgcatcttggcagattcccgccagagcaaaacagccgctagtcctagt
ccgagtcgcccgcaaagttcctcgaataactccgtacccggagcgccaaaccgggtctcc
ttcgctaagctgcgcgaaccacttgaggttccgggactccttgacgtccagaccgattcg
ttcgagtggctgatcggttcgccgcgctggcgcgaatccgccgccgagcggggtgatgtc
aacccagtgggtggcctggaagaggtgctctacgagctgtctccgatcgaggacttctcc
gggtcgatgtcgttgtcgttctctgaccctcgtttcgacgatgtcaaggcacccgtcgac
gagtgcaaagacaaggacatgacgtacgcggctccactgttcgtcaccgccgagttcatc
aacaacaacaccggtgagatcaagagtcagacggtgttcatgggtgacttcccgatgatg
accgagaagggcacgttcatcatcaacgggaccgagcgtgtggtggtcagccagctggtg
cggtcgcccggggtgtacttcgacgagaccattgacaagtccaccgacaagacgctgcac
agcgtcaaggtgatcccgagccgcggcgcgtggctcgagtttgacgtcgacaagcgcgac
accgtcggcgtgcgcatcgaccgcaaacgccggcaaccggtcaccgtgctgctcaaggcg
ctgggctggaccagcgagcagattgtcgagcggttcgggttctccgagatcatgcgatcg
acgctggagaaggacaacaccgtcggcaccgacgaggcgctgttggacatctaccgcaag
ctgcgtccgggcgagcccccgaccaaagagtcagcgcagacgctgttggaaaacttgttc
ttcaaggagaagcgctacgacctggcccgcgtcggtcgctataaggtcaacaagaagctc
gggctgcatgtcggcgagcccatcacgtcgtcgacgctgaccgaagaagacgtcgtggcc
accatcgaatatctggtccgcttgcacgagggtcagaccacgatgaccgttccgggcggc
gtcgaggtgccggtggaaaccgacgacatcgaccacttcggcaaccgccgcctgcgtacg
gtcggcgagctgatccaaaaccagatccgggtcggcatgtcgcggatggagcgggtggtc
cgggagcggatgaccacccaggacgtggaggcgatcacaccgcagacgttgatcaacatc
cggccggtggtcgccgcgatcaaggagttcttcggcaccagccagctgagccaattcatg
taccagaacaacccgctgtcggggttgacccacaagcgccgactgtcggcgctggggccc
ggcggtctgtcacgtgagcgtgccgggctggaggtccgcgacgtgcacccgtcgcactac
ggccggatgtgcccgatcgaaacccctgaggggcccagcatcggtctgatcggctcgctg
tcggtgtacgcgcgggtcaacccgttcgggttcatcgaaacgccgtaccgcaaggtggtc
gacggcgtggttagcgacgagatcgtgtacctgaccgccgacgaggaggaccgccacgtg
gtggcacaggccaattcgccgatcgatgcggacggtcgcttcgtcgagccgcgcgtgctg
gtccgccgcaaggcgggcgaggtggagtacgtgccctcgtctgaggtggactacatggac
gtctcgccccgccagatggtgtcggtggccaccgcgatgattcccttcctggagcacgac
gacgccaaccgtgccctcatgggggcaaacatgcagcgccaggcggtgccgctggtccgt
agcgaggccccgctggtgggcaccgggatggagctgcgcgcggcgatcgacgccggcgac
gtcgtcgtcgccgaagaaagcggcgtcatcgaggaggtgtcggccgactacatcactgtg
atgcacgacaacggcacccggcgtacctaccggatgcgcaagtttgcccggtccaaccac
ggcacttgcgccaaccagtgccccatcgtggacgcgggcgaccgagtcgaggccggtcag
gtgatcgccgacggtccctgtactgacgacggcgagatggcgctgggcaagaacctgctg
gtggccatcatgccgtgggagggccacaactacgaggacgcgatcatcctgtccaaccgc
ctggtcgaagaggacgtgctcacctcgatccacatcgaggagcatgagatcgatgctcgc
gacaccaagctgggtgcggaggagatcacccgcgacatcccgaacatctccgacgaggtg
ctcgccgacctggatgagcggggcatcgtgcgcatcggtgccgaggttcgcgacggggac
atcctggtcggcaaggtcaccccgaagggtgagaccgagctgacgccggaggagcggctg
ctgcgtgccatcttcggtgagaaggcccgcgaggtgcgcgacacttcgctgaaggtgccg
cacggcgaatccggcaaggtgatcggcattcgggtgttttcccgcgaggacgaggacgag
ttgccggccggtgtcaacgagctggtgcgtgtgtatgtggctcagaaacgcaagatctcc
gacggtgacaagctggccggccggcacggcaacaagggcgtgatcggcaagatcctgccg
gttgaggacatgccgttccttgccgacggcaccccggtggacattattttgaacacccac
ggcgtgccgcgacggatgaacatcggccagattttggagacccacctgggttggtgtgcc
cacagcggctggaaggtcgacgccgccaagggggttccggactgggccgccaggctgccc
gacgaactgctcgaggcgcagccgaacgccattgtgtcgacgccggtgttcgacggcgcc
caggaggccgagctgcagggcctgttgtcgtgcacgctgcccaaccgcgacggtgacgtg
ctggtcgacgccgacggcaaggccatgctcttcgacgggcgcagcggcgagccgttcccg
tacccggtcacggttggctacatgtacatcatgaagctgcaccacctggtggacgacaag
atccacgcccgctccaccgggccgtactcgatgatcacccagcagccgctgggcggtaag
gcgcagttcggtggccagcggttcggggagatggagtgctgggccatgcaggcctacggt
gctgcctacaccctgcaggagctgttgaccatcaagtccgatgacaccgtcggccgcgtc
aaggtgtacgaggcgatcgtcaagggtgagaacatcccggagccgggcatccccgagtcg
ttcaaggtgctgctcaaagaactgcagtcgctgtgcctcaacgtcgaggtgctatcgagt
gacggtgcggcgatcgaactgcgcgaaggtgaggacgaggacctggagcgggccgcggcc
aacctgggaatcaatctgtcccgcaacgaatccgcaagtgtcgaggatcttgcgtaa

DBGET integrated database retrieval system