Marivirga tractuosa: Ftrac_3357
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Entry
Ftrac_3357 CDS
T01365
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mtt
Marivirga tractuosa
Pathway
mtt03030
DNA replication
mtt03430
Mismatch repair
mtt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ftrac_3357
03430 Mismatch repair
Ftrac_3357
03440 Homologous recombination
Ftrac_3357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtt03032
]
Ftrac_3357
03400 DNA repair and recombination proteins [BR:
mtt03400
]
Ftrac_3357
Enzymes [BR:
mtt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ftrac_3357
DNA replication proteins [BR:
mtt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ftrac_3357
DNA repair and recombination proteins [BR:
mtt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ftrac_3357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
DUF6282
T2SSK
DNA_pol_A_exo1
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
ADR23331
UniProt:
E4TLQ2
LinkDB
All DBs
Position
3958542..3962843
Genome browser
AA seq
1433 aa
AA seq
DB search
MYLIYDTETTGLPKNYNAPLSDADNWPRCVQIAWQLHGANGELLDAQNHIIKPEGFDIPY
NAEKVHGISTERAQKEGKPLIEVLEAFKTILEKTDVVVGHNISFDISIMGAEMLRKELSE
TVLTEKPIIDTKEAGTDFCKIPGGRGGKYKWPTLTELHKKLFGQDFADAHDAAYDVDATA
KCFFGLITEKAVKPLGETPIEAINYEPPKLDAANFATSSKNEEKAASDALKQAKNADISE
LSDTNFVHLHCHTQFSILQSTTEIPSMVNKAKEMGMPAIAMTDHGNMMGAYNFVRDANKA
GIKPIVGCEYFLTQDRNNKKNKDDGFQTVLLAKNKAGYHNLAKLSSIAFVEGFYYVPRID
REALVQYKENIIATTGGLWGEVPFLILNAGEAQAEEAFLWWKEQFGDDFYVELNQHGVPE
EQKVNEVLLKFAKKYDVKYFAANNTYYTNKEDAEAQDILLCVKDGETTGEQGKPKKYVGK
RGREYRFGLPNDEFYIKSPDEMKKLFADYPEAIACTAEIAEKIEGFELARDVLLPKYDIP
QEFIDPKDAENGGNRGENAYLRHITYEGAKKRYPEITAEIKERLDFELETIERTGYPGYF
LIVQDFTTAAREMGVSVGPGRGSAAGSAVAYCTAITNIDPIKYDLLFERFLNPDRVSLPD
IDIDFDDHGRQKVIDYVIEKYGANQVAQITTYGTMAAKSAIRDTARVMELPLMDADRIAK
LVPDIKLKALFDLASDKKKLSAKLKNNGEAISKAEELLNLAKANDASAKVINQARVLEGS
VRNTGIHACGVIITPDDITKFVPVALAKDSDMYCTQFDNAVVENAGLLKMDFLGLKTLTL
IKDAVRIVEERHGVKLDPDEFPIDDPKTYELFQKGETVGIFQYESPGMQKYLRDLKPTEF
SDLIAMNALYRPGPLEYIPNFVKRKNGLEEISYDLPEMEEYLQETYGITVYQEQVMLLSQ
KLAGFTKGEADVLRKAMGKKIFALLEELKPKFINQGAEKGHPKDVLEKIWKDWEAFAAYA
FNKSHSTCYAWVAYQTAYLKAHYPAEYMASVLSNNMGQITDVTFFMEECKRAGIEVLGPD
VNESNSGFTVNDNGQIRFGLAAIKGAGSAAVESIIQERKSNGQYKDIFDFAERIPLKSVN
KKTFESLAMAGGFDCFKEYHRKQFLASDNGEGTLIEKIIKYAQKLQHEKDSAQTSLFGGE
GGVAIPPPRVAEMEPYSELEKLNIEKEVVGLFISGHPLDEYRFEMESFCNTQVSELNDIE
SLASKNEIKVGGIVTAVAHRQTKTGKPFGTLTLEDYGGSFTFFMFGDDYLANKQFYENGW
FIFISGRVGKKPWGDQALEFKISKVELLSELRDKRTKSLAIMLDLNAITEDLIVELDNLC
QTFKGECEVKLELQDKVNGYKVETKSRKYKVNPSNELIEGLNRIPDLNYRILT
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttacgataccgagaccaccggattaccaaaaaattataacgctccatta
agtgatgcagacaattggccaagatgtgtgcagattgcatggcaattacatggagcaaat
ggtgagcttttagatgcccaaaaccacatcatcaaaccagaaggttttgatattccctat
aatgccgaaaaagtgcatggaatttctactgaaagggctcaaaaagaaggtaaaccatta
attgaagttttagaagctttcaaaaccattttggagaaaaccgatgtggtggtcggacat
aatattagctttgatatttcaattatgggagctgaaatgctgagaaaagagctttctgaa
actgttcttaccgaaaaacctattatagataccaaagaagctggaacggatttctgtaaa
atccctggcggcagaggagggaagtacaaatggccaaccttaacagagcttcataaaaag
ctattcggacaagattttgccgatgcacatgatgcagcatacgatgtggatgctacagca
aagtgtttctttggtttgattactgaaaaagcagtaaagccattaggtgaaaccccaatt
gaggcaatcaattatgagccacctaaattagatgcagccaattttgctactagctcaaaa
aatgaagaaaaagctgcatctgatgcattaaagcaagctaaaaatgctgatatttcagaa
ttaagtgatactaattttgtgcaccttcattgccatacgcaattctccattttgcaatct
actacggaaatcccctctatggtcaacaaagcaaaagagatgggaatgccggctattgcc
atgactgatcatggtaatatgatgggagcttataatttcgtgcgggatgccaataaagct
ggaattaaacccatagtgggctgtgagtatttcctgactcaagatagaaataacaagaaa
aataaagatgatggttttcagacagttcttttggcaaaaaataaagcaggctatcataat
ttagccaagctttcttcaattgcatttgtagaaggattctattatgtgcctcgaattgat
agggaagcattagttcaatacaaagaaaatattattgccaccacagggggactatgggga
gaagtcccattcctaattttgaatgcgggagaagctcaggcagaagaagcctttctttgg
tggaaagaacagtttggtgatgatttttatgtagaattaaatcaacatggggttcctgaa
gagcaaaaagtaaatgaagttttattaaaatttgccaaaaagtatgatgtaaaatatttc
gctgccaataatacttattatactaacaaagaagatgctgaagcgcaagatattttgctt
tgcgtaaaagatggagaaactactggtgagcaaggaaagcctaaaaagtatgtaggtaaa
agggggcgagaatatcgctttggcttacccaatgatgaattctacatcaagtctcccgat
gaaatgaagaaattgtttgctgattatccagaagcgattgcttgcacggctgagatagca
gaaaaaatagagggctttgaattagctagggatgtacttttgccaaaatatgatattccc
caagaattcattgaccctaaggatgctgagaatggtggaaatagaggtgaaaatgcttat
ttacgccatatcacttatgaaggagcaaaaaaacgatatcctgaaattacagctgaaata
aaagagcgattggatttcgaactggaaaccatcgaaagaactggctatccaggttatttc
ttaattgtacaggattttacgacagcagctagggaaatgggtgtttctgtagggcctgga
aggggttcagctgctggttcagcagtagcctattgtacggccattaccaatattgatcct
attaagtatgatctcctttttgagcgttttttaaatccagatagggtttcattgcccgat
attgatattgactttgatgaccatggcaggcagaaagtaattgattatgtgattgaaaaa
tatggtgccaatcaggttgctcaaattaccacttatggtactatggcagcgaaatcagcc
atcagagatacagctagagtgatggaattgccactgatggatgccgataggattgccaaa
ttagtacccgatattaaactcaaagccttattcgatttggcttctgataaaaagaaatta
tcggctaagctgaaaaataacggagaagccattagtaaagcagaagagttattgaatctg
gctaaagccaatgatgcttctgctaaagtaattaatcaagcaagagttcttgaaggctca
gtaagaaatacaggtattcatgcctgcggagtaattatcacacctgacgatattaccaaa
ttcgtaccggttgccttggctaaggactcggatatgtactgcacacaatttgataatgcg
gtggtggaaaatgctggtcttcttaaaatggatttcctgggtttaaaaactttaacgctg
attaaagatgccgtcagaattgtggaggaaaggcatggtgttaaacttgatccggatgaa
ttccctatagacgatcccaaaacctatgaacttttccaaaagggagaaacggtcgggata
ttccaatatgaatcccctggtatgcagaaatatttaagggatttaaagcctacggaattc
tcggatttgattgcgatgaacgcactttatcggccaggtcccctggaatatattccgaat
ttcgttaagcggaaaaatggtttagaagagattagctacgatcttccagaaatggaggaa
tacctgcaggaaacttacggtattaccgtttatcaggagcaggtgatgttgctttctcag
aaattggcaggatttactaaaggtgaagcggatgttttgcgtaaagccatgggtaaaaag
atctttgccttgctggaggagctgaaaccaaaatttattaatcagggagcagaaaaagga
catccaaaagatgtgttggagaagatatggaaggattgggaagcctttgctgcctatgct
tttaataaatcacactcaacttgctatgcttgggtggcttaccaaacggcctatttaaaa
gcacactatcctgcagagtacatggcttctgtgctgagtaataacatgggccaaatcacg
gatgtgaccttctttatggaggaatgtaaacgtgctggtattgaggtgttagggcctgat
gtgaatgaatccaattcaggttttacagtaaatgacaatggtcaaatccgatttggatta
gcagctataaaaggagcaggttctgcggcagtagaaagtattatccaagaacgaaaatct
aatgggcaatataaagatatatttgattttgctgaacgtattccattaaaaagtgtgaat
aaaaagacctttgaatctctggctatggcaggtggatttgattgttttaaagaatatcac
agaaagcaatttttggcttctgataatggagagggtactttaattgaaaaaattattaaa
tatgctcagaaactgcagcatgaaaaagacagtgcgcagacttccttatttggaggagaa
ggaggagtagctattccgcctccgagagttgcagaaatggaaccctattctgagcttgag
aaactgaatattgaaaaggaagtggtaggactttttatttctggccacccattggatgag
tacagatttgaaatggagagcttctgcaatacgcaggtttcggagttaaatgatattgaa
agtcttgcatctaaaaatgaaataaaagtaggcgggattgtaactgctgtagctcacagg
caaactaaaacgggaaagccttttggaaccttaactttggaagattacggtggttctttc
accttctttatgtttggagatgattatctagcgaataagcaattttatgaaaatggttgg
ttcatttttatttcaggaagagtgggtaaaaagccatggggcgatcaggcgctggagttc
aaaataagtaaagtagaattgctttctgaattacgggataaaaggacaaagagtttggct
attatgcttgatttaaatgccatcacggaagatttaatagtggaactggataatttatgc
caaacctttaaaggagaatgtgaagtaaagttggaattgcaggataaagtgaatggctac
aaagtagaaactaaatcccgaaaatataaagttaatccaagcaatgaattgatagaagga
ctcaatagaatccctgatttaaattataggattttgacttaa
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integrated database retrieval system
