Methylosinus trichosporium: CQW49_09335
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Entry
CQW49_09335 CDS
T05155
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mtw
Methylosinus trichosporium
Brite
KEGG Orthology (KO) [BR:
mtw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtw03400
]
CQW49_09335 (addB)
Enzymes [BR:
mtw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CQW49_09335 (addB)
DNA repair and recombination proteins [BR:
mtw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CQW49_09335 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ATQ68069
UniProt:
A0A2D2CZK9
LinkDB
All DBs
Position
1920148..1923255
Genome browser
AA seq
1035 aa
AA seq
DB search
MAPRNVFSIPPGASFLGAFTRALLDGEIIPGLSRASGPLALAETTIYVPTRRAARALAAQ
LAAAIETPAALLPRILPLGDLDEQEASALFHAEEIGSDDALAPAVAEIDRRLTLAALVLH
WAKSLRHAIVAIDPLGRIEHDPREMLLVAPSPASACALAEELARLVDEFIIEDVDPKALG
SLAEDAHDRYFAITTHFLRIALEDWPKILKERECIDGATRRKALVAAQIDALTRGAARGP
VIALGSTGAQPTTARLIAAIERLETGAVVLPGLDLEMDEASWRRVGETSVAREEAAVTHP
QAMLKRLIGIIGVARAEVRRIGAPPAAIEARGRLLAAALKPADSTDLWRAFREAHGASFD
AALAGVSFIEAADEREEALALALCMREALETPGRTAALVTPDRMIARRVCAELARWDIEV
DDSAGRPLAATPIGALARLVAASLEDGVSAVDAAALLAHPLTSLGLGRAEIARIAPLVEI
GVLRNVERRPGPLAEMAAAARARARGQDAAPALRRIADADWRAIEDALARLDAALAPLAT
LPAEAPLTARVRAHAEALERIIGAEAAGEGAEQWLELVDALAAAGGGLAFDAGGYSSFFD
RLAFETAAPSPRRAHPRLKILGLLEARLLDADLVLLAGLDETIWPPQAETGAFLNRTMRA
QLGLSPPERRIGQTAHDFSLAFCAREVVLSRSRKRDGSPTVVSRFVARLAALAGENFSAC
KARGDRARALAAALDHPAEIRAAARPLPRPPVELRPVRLSVTRIEKLRRDPYSVFAEHVL
RLAPLPPLGAEKGAREIGVAVHAALAKFSEAHPKGPLPEDASERLLILARAELAEFLDDP
SFIAFQWPRLETGLRHALAFERERRKIASETFIEIRGEWRLPLADGGVFTLSCVADRIEL
DAAGAAFVVDYKTGTPPSVKQVDAGFSPQLTLEAAMIEAGAFPPIGVRAVSGAAYVRLGG
KDGGETRELKFKDKSFSDVVAEHRANLLELLNQFRDPATPYPSRPFVEFASRYGDYDHLA
RVAEWSRDGGGAGEE
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
ttggcgccgcgcaacgtcttttccattccgcccggcgcttcttttctaggcgccttcacg
cgcgccctgttggacggggagatcattcccgggctttcgcgcgcgagcggcccgctggct
ctggccgagaccacgatctatgtcccgacgcgccgcgccgcgcgggcgctggccgcgcaa
ttggccgcggcgatcgagacgccggcggcgctgctgccgcgcattctgccgctcggcgac
ctcgacgagcaggaggcctcggcgctgtttcacgccgaggagatcggctcggacgacgcg
ctggccccggcggtcgccgagatcgaccgccgcctgacgctcgccgcgctggtgctgcat
tgggcgaaatcgctccgccatgcgatcgtcgcgatcgacccgctcggccgcatcgagcat
gatccgcgcgagatgctgctggtcgccccctcgccggcgagcgcctgcgcgctggccgag
gagctcgcccgcctcgtcgacgaattcatcatcgaggatgtcgatccgaaagctctcggc
tcgctggccgaggacgcccatgaccgctatttcgcgatcaccacgcatttcctgcgcatc
gcgctcgaggactggccgaaaattctgaaagagcgcgaatgcatcgacggcgcgacgcgg
cgcaaggcgctggtggcggcgcagatcgacgcgctgacgcgcggcgcggcgcgcggcccg
gtgatcgcgctcggctccaccggcgcgcagccgacgacggcgcggctcatcgccgccatc
gagcggctggagaccggcgccgtggtgctgccgggcctcgatctcgagatggacgaagcg
tcctggcgccgcgtcggcgaaacgagcgtcgcgcgtgaggaggcggcggtcacccatccg
caggcgatgctgaaacgcctcatcgggatcatcggcgtcgcgcgcgccgaggtccgccgc
atcggcgcgccgccggccgcgatcgaggcgcgcgggcgcctcctcgcagcggcgctgaag
ccggccgattcgaccgatctgtggcgggcgtttcgcgaggcgcatggggcctccttcgac
gcggcgctggcgggcgtttccttcatcgaggcggcggacgagcgcgaggaggcgctggcg
ctggcgctgtgcatgcgcgaggcgctggagacgccgggccgcaccgcggcgctcgtcacc
cccgaccgcatgatcgcgcggcgagtctgcgccgagctggcgcgctgggacatagaggtc
gacgattccgccggccgccccctggccgcgacgccgatcggcgcgctggcgcggctcgtc
gcggcgagcctcgaggacggcgtctccgcggtcgacgccgcggcgctgctcgctcatccg
ctgacctcgctcggcctcggccgcgccgagatcgcgcggatcgccccgctcgtcgagatc
ggcgtgctgcgcaatgtcgagcgtcgccccggcccgctagcggaaatggccgccgcggcg
cgcgcccgcgctcgcgggcaggacgccgcgccggcgctgcgccgcatcgccgacgctgat
tggcgcgcgatcgaggatgcgctcgcgcggctcgacgcggcgctggcgccgctcgccacg
cttcccgccgaggcgccgctcacggcgcgcgtgcgcgcccatgctgaggcgctggagcgg
atcatcggcgccgaagcggcgggcgagggggccgagcaatggctggagctcgtcgatgcg
ctggcggcggcgggcggcggcctcgccttcgacgccggcggctattcttccttcttcgac
cgcctcgccttcgagaccgcggcgcccagtccacggcgcgcgcatccgcggctgaagatt
ctcggcctgctggaggcgcggctgctcgacgccgacctcgttctgctcgccggcctcgac
gagaccatctggccgccgcaggcggagaccggcgcctttctcaaccgcaccatgcgcgcg
caattgggcctctcgccgcccgagcgccgcatcggccagacggcgcatgatttctcgctc
gccttttgcgcgcgcgaggtcgtgttgagccgctcgcgcaagcgcgacggctcgccgacc
gtcgtctcgcgcttcgtcgcgcggctcgcggcgctcgccggcgagaatttctcggcctgc
aaggcgcgcggcgacagggcgcgggcgctcgccgcggcgctcgatcatccggccgagatc
cgcgccgccgcgcggccgctgccgcgcccgccggtcgagttgcgtcccgtccggctcagc
gtcacgcgcatcgagaagctgcggcgcgatccctattccgtgttcgccgagcatgtcctg
cgcctcgcgccgctgcccccgctcggggccgagaagggcgcgcgcgagatcggcgtcgcc
gtccatgctgcgctggcgaaattcagcgaggcgcatccgaagggcccgctgccggaggac
gcgagcgaacgcctgctcatcctcgcccgcgcagagctcgcggagtttctcgacgatccg
tccttcatcgcctttcaatggccgcggctcgagacggggctccgccatgcgctcgccttc
gagcgcgagcggcgcaaaatcgcgagcgagaccttcatcgagataaggggcgaatggcgc
ttgccgctcgccgacggcggcgtcttcacgctctcctgcgtcgccgatcgcatcgagctc
gacgccgccggcgcggcctttgtcgtcgactataagaccggaacgccgccgagcgtgaag
caggtcgacgccggcttctcgccgcagctgacgctggaagccgcgatgatcgaggcgggc
gcctttccgccgatcggcgtgcgcgccgtctccggcgccgcctatgtgcggctcggcggc
aaggacggcggcgagacccgggagctgaagttcaaggacaagagcttttccgacgtcgtc
gccgagcatcgcgccaatctcctggagctgctgaaccagtttcgcgatcccgcgaccccc
tacccctcccgccccttcgtcgaattcgcctcgcgctacggcgactacgaccatctcgcc
cgcgtcgcggaatggtcgcgcgacggcggcggcgcgggggaggagtaa
DBGET
integrated database retrieval system
