KEGG   Mycobacterium ulcerans: MUL_0747
Entry
MUL_0747          CDS       T00435                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta chain, RpoC
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
mul  Mycobacterium ulcerans
Pathway
mul03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MUL_0747 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mul03021]
    MUL_0747 (rpoC)
   03400 DNA repair and recombination proteins [BR:mul03400]
    MUL_0747 (rpoC)
Enzymes [BR:mul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MUL_0747 (rpoC)
Transcription machinery [BR:mul03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MUL_0747 (rpoC)
DNA repair and recombination proteins [BR:mul03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MUL_0747 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: ABL03394
Pasteur: MUL_0747
UniProt: A0PM25
LinkDB
Position
787521..791471
AA seq 1316 aa
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDNEMRHNELSTLEAEMMVERKAVEDQRDADLEARAQKLEAD
LAELEAEGAKADARRKVRDSGEREMRQLRDRAQRELDRLEDIWSTFTKLAPKQLIVDENL
YRELQDRYGEYFTGAMGAESIQKLIETFDIDAEAEILRDVIRNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPLVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPMLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTEVEGDKGAYQ
PAVQDSPETGVYSSPAEAIMAADRGVLSVRAKIKVRLTQLRPPAEIEDELFGHNGWQPGD
AWTAETTLGRVLFNELLPLGYAFVNKQMHKKVQAAIINDLAERYPMIVVAQTVDKLKDSG
FYWATRSGVTVSMADVLVPPRKKEILDSYEERAEKVEKQFQRGALNHDERNEALVEIWKE
ATDEVGQALREHYPADNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCQTERGIMVE
LAERQGDGTLIRDPYIETSAYARTLGADAVDEAGNVVVARGEDLGDPEIEACLAAGITQV
KVRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
GEDITGGLPRVQELFEARVPRGKAPIADVTGRVRLEDGERFYTIAIVPDDGGEEVVYDKL
SKRQRLRVFKHEDGSERVLSDGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVREVQE
VYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLIDRAEFEAENRRVVAESGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLNGLKENVIIGKLIPA
GTGINRYRNIAVQPTEEARVAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq 3951 nt   +upstreamnt  +downstreamnt
gtgctagacgtcaacttcttcgatgagctccggatcggcctggctaccgcggaggacatc
cgtcagtggtcctacggcgaggtcaagaagccggagaccatcaactaccggaccttgaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgttcgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgactcgggccaaggtgcgtcgtgagcggatgggccacatcgagttggccgcgccc
gtcacccacatctggtacttcaagggcgtcccgtcgcggttggggtacctgttggacctg
gcgccgaaggatctcgagaagattatttacttcgccgcatacgtgatcacctcggtcgac
aacgaaatgcgccacaacgagctgtccacgctcgaggccgaaatgatggtggagcgcaag
gccgtcgaggaccagcgcgatgccgatctggaagcccgtgcccagaagctggaggccgac
ctggccgagctggaggccgagggcgcgaaagccgacgcacggcgcaaggttcgtgacagc
ggtgagcgcgagatgcgtcagctgcgcgaccgggcccagcgtgagctggaccggctcgag
gacatctggagcaccttcaccaagctggcccccaagcagctgatcgtcgacgagaacctc
taccgggaactgcaggaccgctacggcgagtacttcaccggtgccatgggcgcggagtcg
atccagaagctgatcgagaccttcgacatcgacgccgaagccgagatcctgcgggacgtc
attcgcaatggcaaggggcagaagaagcttcgtgccctcaagcgcctgaaggtggtcgcc
gccttccagcagtcgggcaactctccgatgggcatggtgctcgatgcggtgccggtgatt
ccgccggagctgcgcccgctggtgcagctcgacggtggccgcttcgccaccagcgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgtctcaagaggctgatcgacctc
ggcgcacccgagatcatcgtcaacaacgagaagcggatgctgcaggagtcggtggacgcg
ctgttcgacaacggccgtcgcggccggccggttaccggtccgggtaaccgcccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgccagaacctgctcggtaag
cgtgttgactactcgggccgttcggtgatcgtggtcggtccgcagctcaagctgcaccag
tgtggtctgcctaagctgatggcgctggaactgttcaagccgttcgtgatgaagcgactg
gtcgacctaaaccacgcgcagaacatcaagagcgccaagcggatggtggagcgccagcgt
ccgcaggtgtgggacgtgctcgaggaagtcattgcagagcacccggtgctgctcaaccgc
gcgcccaccctgcaccgcctcggcatccaggccttcgaaccgatgctggtggaaggcaag
gccattcagctgcacccgttggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctaccgctgagcgccgaggctcaggccgaggcccgcattctgatgctg
tcgagtaacaacatcctgtcgccggcctcgggtcgcccgctggccatgccgcgactggac
atggtgaccgggttgtactacctgaccaccgaggtcgagggtgacaagggtgcctaccag
cccgctgtgcaggacagcccggagacgggtgtgtactcgtcaccggcggaagccatcatg
gcggccgaccggggcgtgctctcggtccgcgccaagatcaaggtgcggctgacgcaactg
cgtcccccggccgagatcgaggacgagctgttcggccacaacggctggcagccgggcgat
gcgtggacggccgagaccaccttgggtcgtgtgttgttcaacgagctgctgccgctgggc
tacgccttcgtgaacaagcagatgcacaaaaaggtgcaggccgcgatcatcaacgacctg
gccgagcgctacccgatgatcgtggtcgcgcagaccgtcgacaagctcaaggactccggt
ttctactgggcgacccgcagtggtgtcacggtctcgatggccgacgtgctggtgccgccg
cgcaagaaggagatcctcgactcctacgaggagcgggcggagaaggtcgagaagcagttc
cagcgtggtgctctgaaccatgacgagcgcaacgaggcactggtggagatctggaaggaa
gccaccgacgaggtcggccaggcgctgcgcgagcactacccggccgacaacccgatcatc
acgatcgtcgactcgggcgccacgggtaacttcacccagactcgaacgctggccggcatg
aagggtctggtgaccaaccccaagggtgagttcatcccacgcccgatcaagtcctcgttc
cgtgagggcctgaccgtgttggagtacttcatcaacacccacggtgcccgaaagggcttg
gcggacaccgcactgcgtaccgccgactccggctacctgacccgtcgtctggtggacgtc
agccaggacgtgatcgtgcgcgagcacgactgccagaccgagcgcggcatcatggtcgag
ctggccgagcgtcagggcgacggcacgctgatccgcgacccgtacatcgagacctcggcg
tacgcgcggaccctgggcgccgacgcggtcgatgaggccggcaatgtcgttgtggcgcgt
ggtgaggacttgggcgacccggagatcgaggcctgcctggcggcgggtatcacccaggtc
aaggttcgctcggtgttgacctgcaccacgggcaccggtgtgtgcgcgacctgctacgga
cgttcgatggcgaccggcaagctggtcgacatcggtgaggcagtcggcatcgtcgccgcc
caatccatcggtgaacccggcacgcagctgacgatgcgtaccttccaccagggtggtgtg
ggtgaggacatcaccggcggtctgccgcgtgtccaggagctcttcgaggctcgggtgccg
cgtggtaaggcgcctatcgccgatgtcaccggtcgggtccggctcgaggacggtgagcgc
ttctacacgatcgccatcgtccccgacgatggcggcgaggaagtcgtctacgacaagctg
tccaagcggcagcggctgcgggtgttcaagcacgaggacggctcggagcgggtgctttcc
gacggcgaccacgtcgaggtgggacagcagctgatggaaggctctgccgacccgcacgag
gtgctgcgtgtgcagggcccgcgtgaggtgcagatccacttggtccgcgaggtccaggag
gtctaccgggcgcagggtgtgtcgatccacgacaagcacatcgaggtgatcgtgcgccag
atgctgcgccgggtcaccatcatcgactcgggcgcgacggagttcctgcccggctcgctg
atcgaccgtgcggagttcgaggcggagaaccgccgggtggtggccgaaagcggcgagccc
gcggccggtcgtccggtgctgatgggtatcaccaaggcatcgctggccaccgactcgtgg
ttgtcggcggcgtcgttccaggagaccacgcgagtgctgaccgatgcggcgatcaactgc
cgcagcgacaagctcaacggtctgaaggagaacgtgatcatcggaaagctgatcccggct
ggtaccggtatcaaccgctaccgcaacatcgcggtgcagccgaccgaagaggcccgtgtc
gcggcgtacacgatcccgtcctacgaggaccagtactacagcccggacttcggccaggcg
accggtgctgcggttccgttggacgactacggctacagcgactaccggtag

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