Mycobacterium ulcerans: MUL_0747
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Entry
MUL_0747 CDS
T00435
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta chain, RpoC
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mul
Mycobacterium ulcerans
Pathway
mul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MUL_0747 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mul03021
]
MUL_0747 (rpoC)
03400 DNA repair and recombination proteins [BR:
mul03400
]
MUL_0747 (rpoC)
Enzymes [BR:
mul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MUL_0747 (rpoC)
Transcription machinery [BR:
mul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MUL_0747 (rpoC)
DNA repair and recombination proteins [BR:
mul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MUL_0747 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ABL03394
Pasteur:
MUL_0747
UniProt:
A0PM25
LinkDB
All DBs
Position
787521..791471
Genome browser
AA seq
1316 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDNEMRHNELSTLEAEMMVERKAVEDQRDADLEARAQKLEAD
LAELEAEGAKADARRKVRDSGEREMRQLRDRAQRELDRLEDIWSTFTKLAPKQLIVDENL
YRELQDRYGEYFTGAMGAESIQKLIETFDIDAEAEILRDVIRNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPLVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPMLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTEVEGDKGAYQ
PAVQDSPETGVYSSPAEAIMAADRGVLSVRAKIKVRLTQLRPPAEIEDELFGHNGWQPGD
AWTAETTLGRVLFNELLPLGYAFVNKQMHKKVQAAIINDLAERYPMIVVAQTVDKLKDSG
FYWATRSGVTVSMADVLVPPRKKEILDSYEERAEKVEKQFQRGALNHDERNEALVEIWKE
ATDEVGQALREHYPADNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCQTERGIMVE
LAERQGDGTLIRDPYIETSAYARTLGADAVDEAGNVVVARGEDLGDPEIEACLAAGITQV
KVRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
GEDITGGLPRVQELFEARVPRGKAPIADVTGRVRLEDGERFYTIAIVPDDGGEEVVYDKL
SKRQRLRVFKHEDGSERVLSDGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVREVQE
VYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLIDRAEFEAENRRVVAESGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLNGLKENVIIGKLIPA
GTGINRYRNIAVQPTEEARVAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgagctccggatcggcctggctaccgcggaggacatc
cgtcagtggtcctacggcgaggtcaagaagccggagaccatcaactaccggaccttgaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgttcgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgactcgggccaaggtgcgtcgtgagcggatgggccacatcgagttggccgcgccc
gtcacccacatctggtacttcaagggcgtcccgtcgcggttggggtacctgttggacctg
gcgccgaaggatctcgagaagattatttacttcgccgcatacgtgatcacctcggtcgac
aacgaaatgcgccacaacgagctgtccacgctcgaggccgaaatgatggtggagcgcaag
gccgtcgaggaccagcgcgatgccgatctggaagcccgtgcccagaagctggaggccgac
ctggccgagctggaggccgagggcgcgaaagccgacgcacggcgcaaggttcgtgacagc
ggtgagcgcgagatgcgtcagctgcgcgaccgggcccagcgtgagctggaccggctcgag
gacatctggagcaccttcaccaagctggcccccaagcagctgatcgtcgacgagaacctc
taccgggaactgcaggaccgctacggcgagtacttcaccggtgccatgggcgcggagtcg
atccagaagctgatcgagaccttcgacatcgacgccgaagccgagatcctgcgggacgtc
attcgcaatggcaaggggcagaagaagcttcgtgccctcaagcgcctgaaggtggtcgcc
gccttccagcagtcgggcaactctccgatgggcatggtgctcgatgcggtgccggtgatt
ccgccggagctgcgcccgctggtgcagctcgacggtggccgcttcgccaccagcgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgtctcaagaggctgatcgacctc
ggcgcacccgagatcatcgtcaacaacgagaagcggatgctgcaggagtcggtggacgcg
ctgttcgacaacggccgtcgcggccggccggttaccggtccgggtaaccgcccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgccagaacctgctcggtaag
cgtgttgactactcgggccgttcggtgatcgtggtcggtccgcagctcaagctgcaccag
tgtggtctgcctaagctgatggcgctggaactgttcaagccgttcgtgatgaagcgactg
gtcgacctaaaccacgcgcagaacatcaagagcgccaagcggatggtggagcgccagcgt
ccgcaggtgtgggacgtgctcgaggaagtcattgcagagcacccggtgctgctcaaccgc
gcgcccaccctgcaccgcctcggcatccaggccttcgaaccgatgctggtggaaggcaag
gccattcagctgcacccgttggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctaccgctgagcgccgaggctcaggccgaggcccgcattctgatgctg
tcgagtaacaacatcctgtcgccggcctcgggtcgcccgctggccatgccgcgactggac
atggtgaccgggttgtactacctgaccaccgaggtcgagggtgacaagggtgcctaccag
cccgctgtgcaggacagcccggagacgggtgtgtactcgtcaccggcggaagccatcatg
gcggccgaccggggcgtgctctcggtccgcgccaagatcaaggtgcggctgacgcaactg
cgtcccccggccgagatcgaggacgagctgttcggccacaacggctggcagccgggcgat
gcgtggacggccgagaccaccttgggtcgtgtgttgttcaacgagctgctgccgctgggc
tacgccttcgtgaacaagcagatgcacaaaaaggtgcaggccgcgatcatcaacgacctg
gccgagcgctacccgatgatcgtggtcgcgcagaccgtcgacaagctcaaggactccggt
ttctactgggcgacccgcagtggtgtcacggtctcgatggccgacgtgctggtgccgccg
cgcaagaaggagatcctcgactcctacgaggagcgggcggagaaggtcgagaagcagttc
cagcgtggtgctctgaaccatgacgagcgcaacgaggcactggtggagatctggaaggaa
gccaccgacgaggtcggccaggcgctgcgcgagcactacccggccgacaacccgatcatc
acgatcgtcgactcgggcgccacgggtaacttcacccagactcgaacgctggccggcatg
aagggtctggtgaccaaccccaagggtgagttcatcccacgcccgatcaagtcctcgttc
cgtgagggcctgaccgtgttggagtacttcatcaacacccacggtgcccgaaagggcttg
gcggacaccgcactgcgtaccgccgactccggctacctgacccgtcgtctggtggacgtc
agccaggacgtgatcgtgcgcgagcacgactgccagaccgagcgcggcatcatggtcgag
ctggccgagcgtcagggcgacggcacgctgatccgcgacccgtacatcgagacctcggcg
tacgcgcggaccctgggcgccgacgcggtcgatgaggccggcaatgtcgttgtggcgcgt
ggtgaggacttgggcgacccggagatcgaggcctgcctggcggcgggtatcacccaggtc
aaggttcgctcggtgttgacctgcaccacgggcaccggtgtgtgcgcgacctgctacgga
cgttcgatggcgaccggcaagctggtcgacatcggtgaggcagtcggcatcgtcgccgcc
caatccatcggtgaacccggcacgcagctgacgatgcgtaccttccaccagggtggtgtg
ggtgaggacatcaccggcggtctgccgcgtgtccaggagctcttcgaggctcgggtgccg
cgtggtaaggcgcctatcgccgatgtcaccggtcgggtccggctcgaggacggtgagcgc
ttctacacgatcgccatcgtccccgacgatggcggcgaggaagtcgtctacgacaagctg
tccaagcggcagcggctgcgggtgttcaagcacgaggacggctcggagcgggtgctttcc
gacggcgaccacgtcgaggtgggacagcagctgatggaaggctctgccgacccgcacgag
gtgctgcgtgtgcagggcccgcgtgaggtgcagatccacttggtccgcgaggtccaggag
gtctaccgggcgcagggtgtgtcgatccacgacaagcacatcgaggtgatcgtgcgccag
atgctgcgccgggtcaccatcatcgactcgggcgcgacggagttcctgcccggctcgctg
atcgaccgtgcggagttcgaggcggagaaccgccgggtggtggccgaaagcggcgagccc
gcggccggtcgtccggtgctgatgggtatcaccaaggcatcgctggccaccgactcgtgg
ttgtcggcggcgtcgttccaggagaccacgcgagtgctgaccgatgcggcgatcaactgc
cgcagcgacaagctcaacggtctgaaggagaacgtgatcatcggaaagctgatcccggct
ggtaccggtatcaaccgctaccgcaacatcgcggtgcagccgaccgaagaggcccgtgtc
gcggcgtacacgatcccgtcctacgaggaccagtactacagcccggacttcggccaggcg
accggtgctgcggttccgttggacgactacggctacagcgactaccggtag
DBGET
integrated database retrieval system