KEGG   Mannheimia varigena USDA-ARS-USMARC-1312: X874_9060
Entry
X874_9060         CDS       T03028                                 
Name
(GenBank) metalloprotease
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
mvg  Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:mvg00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mvg01002]
    X874_9060
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:mvg03110]
    X874_9060
Peptidases and inhibitors [BR:mvg01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   X874_9060
Chaperones and folding catalysts [BR:mvg03110]
 Other chaperones and cochaperones
  AAA proteases
   X874_9060
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext TIP49 AAA_5 nSTAND3 AAA_16 RuvB_N AAA_2 Mg_chelatase AAA_22 AAA_28 AAA_33 IstB_IS21 AAA_17 CSTF2_hinge AAA_14 LonB_AAA-LID AAA_24 Parvo_NS1 Zeta_toxin RNA_helicase HopA1 AAA_7 ABC_tran AAA_18
Other DBs
NCBI-ProteinID: AHG77542
LinkDB
Position
973717..975660
AA seq 647 aa
MVKNILLWVVVAIVMMTAYEGFNSNFGGASNTVPYSTFLSDIKENRLKGVDFKQNDDTIV
VTKNDGATYQTVMPMYDEYLMADLAKTNAVITGQPAERRGLLSQILISWFPMLLLIGFYI
FYMRQMQGGGGRGAMGFGKSKAKMLTADEVKTRFSDVAGCDEAKEEVGEVVEFLRDPGKF
QKLGGRIPKGILMVGPPGTGKTLLAKAIAGEARVPFFTMAGSDFVEMFVGVGASRVRDLF
DQAKKNAPCIIFIDEIDAVGRKRGGAGFSGGHDEREQTLNQMLVEMDGFEGSEGVIIIAA
TNRADVLDDALTRPGRFDRQVTVDLPNVKGREQILKVHLKKVPLAEGVDPMQIARGTPGY
SGAQLANLVNEAALFAARKNKRVVTMEDFEEARDKINMGPERRSNTMTEKEIINTAYHEA
GHVIVGYLMPEHDPLNKVTIVPRGQALGFAQFLPEGDRVSETFTKLESQLSTLFAGRIAE
GLIFGEDKITTGASSDIHRATQIARAMVTQWGFSKELGPIFYQNEDGMGAIKGVSEESQK
LIDTEMRKIIDRNYQRAKQTLEENMDILHAMKDALLKYETLDSKQIDDLMARRPVGEPSG
WTDTPTKDDNATPPSGEQAADTTSIVDDKPTKDNNIGDSLADTKAEH
NT seq 1944 nt   +upstreamnt  +downstreamnt
atggttaaaaatattttgctttgggtagtggttgccattgtaatgatgactgcctacgag
ggcttcaactctaatttcggtggagcttcaaacactgtgccatattcgacttttttaagt
gatattaaagaaaatcgcttaaaaggggtcgatttcaaacagaatgacgacactattgtg
gttactaagaacgatggtgcaacttaccaaaccgtaatgccgatgtatgatgaatactta
atggcagatttagcaaaaaccaatgcggtaatcacagggcaaccagcagagcgtcgaggg
ttattgtcccaaattttaatctcttggtttccaatgttattgttaattggcttctacatt
ttctatatgagacaaatgcaaggcggtggcggacgtggagcaatgggctttggtaaaagc
aaagcgaaaatgctgaccgccgatgaagttaaaacccgtttctctgatgttgctggttgt
gatgaagcgaaagaagaagttggtgaagtagttgagtttttgcgtgatccaggaaaattc
caaaagcttggcggacgtattccaaaagggatattaatggtaggtcctccgggaacaggt
aaaactttattagcaaaagcaattgcaggcgaagcaagagttccgttcttcacaatggct
ggttcagacttcgtagaaatgtttgtcggtgttggagcctcccgtgtacgtgatttattc
gaccaagcgaagaaaaatgcgccgtgtattatctttattgatgagattgacgcagtaggt
cgtaaacgtggcggagcaggttttagtggcggacacgatgaacgtgaacaaacccttaac
caaatgctagtggaaatggacggttttgaaggttcagaaggtgtgattattatcgccgca
actaaccgtgccgatgtgcttgatgatgctttaacccgtccagggcgttttgaccgccag
gtaactgtggatttaccgaatgtaaaaggtcgtgagcagatcttgaaagttcacttgaaa
aaagtaccgcttgcagaaggtgttgatccaatgcaaattgcccgtggtacaccaggttat
tcaggtgcacaattagcgaacttagtgaatgaagctgcattgttcgcagcacgtaaaaat
aaacgtgtagtaacaatggaagactttgaagaggctcgtgataaaattaatatgggtccg
gaacgtcgttcaaatacaatgacggaaaaagaaattatcaatactgcttatcacgaagca
ggacacgttattgtcggctatttaatgccggaacacgatccattgaataaagttactatt
gtacctcgtggtcaagcactcggtttcgcccaattcttaccggagggtgaccgtgtgagt
gaaacatttaccaaattagaaagccaactttcaactttattcgcaggtcgtatcgctgaa
ggtttgatcttcggggaagataaaatcactaccggagcatcgtctgatatccaccgtgca
acacaaattgctcgagcaatggtaacacagtgggggttctcgaaggagctcggtccgatc
ttctatcaaaatgaagatggaatgggagcgattaaaggcgtatcggaagagtcacagaaa
ctgattgataccgaaatgcgtaaaatcatcgaccgtaactatcaacgtgcgaagcaaacg
ctagaagagaatatggatatcttgcacgctatgaaagatgccttattgaaatacgaaact
ttagatagcaaacaaattgatgacttaatggctcgtcgtccggtaggagaaccatcaggt
tggacagacacaccaactaaagacgacaatgctacgccaccaagcggtgaacaagcagca
gatactacttctatcgtagatgataagccgactaaggataacaatattggcgattccctc
gctgatacgaaagcggaacactaa

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