Myotis davidii (David's myotis): 102752777
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Entry
102752777 CDS
T02992
Symbol
COL4A1
Name
(RefSeq) collagen type IV alpha 1 chain
KO
K06237
collagen type IV alpha
Organism
myd
Myotis davidii (David's myotis)
Pathway
myd04151
PI3K-Akt signaling pathway
myd04510
Focal adhesion
myd04512
ECM-receptor interaction
myd04820
Cytoskeleton in muscle cells
myd04926
Relaxin signaling pathway
myd04933
AGE-RAGE signaling pathway in diabetic complications
myd04974
Protein digestion and absorption
myd05146
Amoebiasis
myd05165
Human papillomavirus infection
myd05200
Pathways in cancer
myd05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
myd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102752777 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102752777 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102752777 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102752777 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102752777 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
102752777 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102752777 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
102752777 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102752777 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
102752777 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102752777 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
myd04147
]
102752777 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
myd00536
]
102752777 (COL4A1)
Exosome [BR:
myd04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102752777 (COL4A1)
Glycosaminoglycan binding proteins [BR:
myd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102752777 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102752777
NCBI-ProteinID:
XP_006770770
LinkDB
All DBs
Position
Un
AA seq
1662 aa
AA seq
DB search
MINVAVDTCSQPFMGTHVANSAHPEIEQEMGGGCAGSGCGKCDCQGVKGQKGERGLPGLQ
GVIGFPGMQGPEGPQGPPGQKGDAGEPGLPGTKGTRGPPGISGYPGNPGIPGIPGQDGPP
GPRGIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGF
PGPPGIPGSPGFPGMQGPVGPPGYTGPPGPPGPPGPPGEKGQMGLSFQGPKGEKGDQGVT
GPPGMSGEAQREEKGELVTKGEKGIKGDPGSPGVPGYGEKGEPGKPGPRGKPGKDGEKGE
KGSPGFPGPPGFPGQPGQPGFKGDKGEAGPPGPPGIVIGTGPLGEKGERGFPGPPGLRGE
PGPKGFPGQQGLPGPPGIPIPGQIGAPGFPGERGEKGDKGYPGASLPGPSGRDGLPGPPG
RPGPPGPPAYIDGQVECQPGPIGDPGPPGIPGQPGLLGEVGEKGQKGEGCLVCDTTGLRG
PPGPQGPPGDRGFPGQPGAKGEKGLPGRDGLEGLPGPQGSPGLMGQPGAKGEPGEIYFDM
RLKGDKGDPGFPGQPGMPGRSGSPGRDGHPGLPGPKGSPKGYRVGFPGSRGDIGPPGPPG
YGPSGPAGDKGQAGFPGNPGPPGQPGLRGEAGRVMPLPGPPGADGLPGSPGFQGPQGDRG
FPGTPGRPGLPGEKGAVGQAGIGFPGPPGPKGVDGLPGDLGLPGNPGRPGINGFPGNPGP
PGQKGEPGIGLPGLKGAPGLPGTPGTPGEKGNIGGPGIRGEHGAIGPPGLQGIRGDPGPP
GLQGPKGAPGVPGVGPPGLMGPPGRQGPPGSSGPPGVKGEKGFPGFPGLDMPGPKGDKGT
QGLPGLTGQSGLPGPPGQQGTPGLPGFQGLKGEMGVMGTPGQPGSPGPAGTPGFPGEKGD
HGFPGSVGPRGDPGVKGEKGAVGLPGKPGTVDKTDMDTMKGEKGDPGDKGQVGPSGDKGS
QGDPGTPGLPGKDGQAGHPGQPGPKGDPGISGTPGSPGLPGPKGSVGGMGLPGSPGEKGV
PGIPGSQGAPGLPGEKGAKGEKGQAGRPGIGIPGQPGEKGDQGLAGFPGSPGEKGEKGSL
GLPGMPGPPGPKGSPGSVGYPGSPGLPGEKGDKGFPGLDGVPGIKGEPGHPGQPGATGPP
GPKGEPGNDGFPGSAGEKGEPGIPGRGVPGFPGSKGDKGSKGEVGFPGLAGSPGIPGSKG
EKGFSGPPGPQGQPGLPGAPGRPVEGPKGDRGPQGQPGLPGPPGPMGPPGLPGIDGLKGD
RGNPGWPGAPGPPGPKGDPGFQGMPGIGGTPGITGAKGDMGPPGVPGFQGQKGLPGLQGI
KGDQGDQGFPGSKGLPGPPGPPGPYQIVKGEPGLPGPEGPAGMKGFQGPPGPKGQQGVTG
SVGIPGPPGSPGFDGAPGQKGERGPSGPPGPRGFPGPPGPDGLPGSMGPPGTPSVDHGFL
VTRHSQTTDDPQCPPGTKILYNGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLFCNI
NNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCSVCEAPAMVMAVHSQTIQI
PPCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYAN
AYSFWLATIERNEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgataaatgtcgcagtagacacatgtagtcaaccttttatgggaactcatgtagcaaat
agtgctcacccggagattgaacaagagatgggtggtggatgtgctggctccggctgtggg
aaatgtgactgccagggagtgaagggacaaaagggtgaaagaggcctcccagggttacaa
ggtgtcattggatttccaggaatgcaaggacctgaggggccacagggaccacctggacag
aagggagatgctggagaaccaggactgccaggaacaaaagggacaagaggacccccagga
atatccggttaccctggaaacccaggaattcctggtattcctggacaagacggtccccca
ggtccccgtggtatcccaggatgcaacgggacaaagggtgaacgagggcccctgggacct
cctggtttgcctggatttgctggaaatcctggaccaccagggttacccggaatgaagggg
gatcctggtgaaatactgggccacgtgcccgggatgctgctaaaaggtgaaagaggattt
cccggacccccaggaataccaggttcaccaggattcccagggatgcaaggtcccgtaggc
cctccaggatataccggaccaccaggtccccctggccctcctggtcctccaggtgaaaag
ggtcaaatgggcttaagttttcaaggaccaaaaggtgaaaaaggcgatcagggggtcact
ggccctccaggaatgtcaggagaggctcaaagggaagaaaaaggagaacttgtcactaaa
ggagagaagggtattaaaggtgaccctggatctccgggagtgccagggtatggagagaaa
ggtgaacctggaaaaccaggaccccgaggaaagcctgggaaagatggtgaaaaaggagaa
aaggggagtccagggtttcccggccccccagggttcccaggacaaccaggacaaccaggc
tttaagggagacaaaggtgaagcaggtcctccaggcccacctggaattgtgatcggcaca
ggacccttgggagaaaaaggcgagaggggcttcccagggcctccggggttgagaggagag
ccagggcccaaaggtttcccaggacaacaaggcctgccaggccccccaggcatcccgata
cctgggcagattggtgctcccggcttccctggtgaaagaggagaaaaaggtgacaaagga
tatccaggggcgtctttgccaggaccaagtggaagagatggactcccgggccctcctggg
cgccccggacctcctggaccgccagcctacatagatggacaagtggaatgccagcctgga
ccaatcggtgatccgggtcctcctggaattccagggcaaccaggattgttgggtgaagtt
ggagagaaaggtcaaaaaggagagggttgccttgtctgtgacacaacaggacttcgtgga
ccccccgggccacaggggcccccaggagatagaggtttcccggggcagccaggggccaag
ggcgagaaaggtctacctggcagggacggtctggaaggattgcctggccctcaaggttca
ccagggctgatgggccagccaggagccaagggagagcctggtgagatttacttcgacatg
cgactcaaaggtgacaaaggagacccaggtttcccaggacaacccggcatgccaggcaga
tcagggtctcctggaagagatggacatccaggtctgcccggccccaaaggctccccgaag
ggttacagagttggatttcctggcagtcgtggtgacatcggccctcctgggcctccaggg
tatggcccaagtggccccgctggtgacaaaggacaagcgggctttccgggaaaccctgga
ccccccggccagccaggtctcaggggtgaagcaggaagagtcatgcctttacctggcccc
cctggagcagatggacttccaggttccccaggtttccaagggccccaaggtgaccgaggt
ttccctggaaccccaggaaggcctggcctcccaggagagaagggcgctgtcggccaggcg
gggattggatttccagggcctccaggccccaaaggcgttgatggcttgcccggagatctc
ggacttcctgggaatccaggtcgcccaggaattaatggcttccctggcaacccaggtcct
cccggccaaaagggagagcccgggattggtctgccaggactcaaaggagcgccaggtctt
ccaggcactcctggcacacctggggagaaggggaacatcgggggaccaggcattcgtgga
gagcatggagccatcgggccccccggccttcagggaatcagaggtgacccaggacctcct
ggattacaaggtcccaaaggagctccaggagtccctggagttggtccccctggattgatg
ggcccgcccggaagacagggaccaccaggatcctcaggcccacctggagtgaaaggagag
aagggtttccccggattcccaggtctggacatgccaggacccaaaggagataaaggcact
caagggctccccggcttaactggacagtcggggcttcctggtcctcctggacagcagggg
acgccaggacttcctgggtttcaaggtctcaagggagagatgggcgtcatggggacccca
gggcagcctggctctccaggaccagcgggcacgccaggatttccgggtgaaaaaggggac
catggctttccgggctctgtaggacccaggggagaccctggtgtcaagggtgaaaaagga
gctgttggtctccctggcaaacctggaaccgtggataaaactgacatggacaccatgaag
ggggaaaagggagatccaggagataaaggacaagttggcccaagtggtgacaaaggatct
caaggagaccctgggaccccaggactgcctggaaaggacggccaagcagggcatcctggg
cagccaggacctaaaggtgatccaggcattagtggaacaccaggttctccaggacttcct
ggaccaaaaggatcggttggtggaatgggcctgccaggatcacctggagagaaaggtgtg
cctggaatccccggctcgcagggggcccctggcttacctggagagaaaggagcaaaaggg
gagaaggggcaagcaggccggcctggcattggaattccaggacagcctggagaaaaggga
gatcaagggttagcaggttttccaggaagtcctggagagaagggagaaaaaggaagtctc
gggctcccaggcatgcccgggcctccgggccccaaaggatcaccaggaagtgttggctat
ccaggaagccctgggttgcctggagaaaaaggtgacaaaggcttccctggattggatggt
gtccctggcatcaaaggagaaccaggtcatcccggacagcctggtgcgacaggcccaccc
ggcccgaaaggggaacccggcaatgatggatttccagggtcggcgggagagaagggtgaa
ccaggtatacccggaagaggcgtcccagggttcccagggtccaaaggagacaaaggctca
aagggtgaagtgggtttcccaggattagctgggagcccaggaattcctggatccaaagga
gagaaaggattctcgggtcctccggggccgcaaggacagccaggattgccgggagctccg
ggccgccccgtggaggggcccaaaggagaccggggcccgcagggacagcctggcctgcca
gggcctccgggaccaatggggcctccagggctccctgggattgatggactgaaaggtgac
agaggaaacccaggctggccaggggctcctggccctccaggacccaagggagacccagga
ttccaaggcatgcctgggattggtggtactccaggaatcacaggtgctaagggtgatatg
ggacctccaggagttccaggttttcaaggtcagaaaggtctccctggccttcagggaatt
aaaggagatcaaggagaccaaggtttccctggatctaaaggtcttccaggtccccctggg
cccccaggtccctaccaaattgtcaaaggggagccagggctccctggtccagaaggtcct
gccggtatgaaaggatttcagggacctccaggccccaaaggacagcaaggtgtgacagga
tccgtgggcatacctggaccaccaggtagtcccggctttgatggtgcccctggccagaaa
ggagagaggggaccctctggacctcctggtccaagagggtttccaggaccacccggccct
gatgggttgccaggatccatgggtcccccaggcaccccatctgttgatcacggcttcctt
gtgaccaggcacagtcaaacaacagatgatccacagtgtcctcccgggaccaaaattctt
tacaatgggtactctttgctctacgtgcaaggcaatgaaagggcccacggacaggactta
ggcactgctggaagctgcctgcgaaagttcagtaccatgcccttcctgttctgcaacatc
aacaatgtctgcaactttgcctctcgaaatgattattcctactggttgtccaccccggag
cccatgccaatgtccatggcacccatcgccggggacaatattagaccgtttattagcagg
tgttccgtgtgtgaggcgccagccatggtgatggctgtgcacagccagaccattcagatc
ccgccgtgccccaacgggtggtcctcactctggattggctattcctttgtgatgcacacc
agcgctggtgccgaaggttctgggcaagccctcgcatcccccgggtcctgtctggaagag
tttagaagtgcgcccttcatcgagtgccacggccgtgggacttgtaattactatgcaaat
gcttacagcttttggcttgccactatagagagaaatgagatgttcaagaagcccacgccg
tccaccttgaaggccggggagctgcgcacgcacgtcagccgctgccaagtctgtatgaga
agaacataa
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