Methylorubrum zatmanii: B2G69_03350
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Entry
B2G69_03350 CDS
T04981
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
mza
Methylorubrum zatmanii
Brite
KEGG Orthology (KO) [BR:
mza00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
B2G69_03350
Enzymes [BR:
mza01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
B2G69_03350
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Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_30
ResIII
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ARO53283
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All DBs
Position
743964..746453
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AA seq
829 aa
AA seq
DB search
MSSPIPALPIEAALPALRAALSGRSSAVLVAPPGAGKTTRVPLALLDEAWLGAQKIILLE
PRRLAARGAAERMAATLGERVGDTVGLRVRLGSKISARTRIEVVTEGVFTRMILDDPELT
GIGAVLFDEFHERSLDADLGLAFALDAQGALREDLRILVMSATLDGARVAGLLGDAPVVE
SEGRAYPVETRHLDRDPNQRIEDAMAAAILRALRADPGSVLAFLPGQAEIRRTAERLEGR
LPDDTDLAPLYSALTQGEQDRAVAPAPPGRRKVVLATSIAETSLTIQGVRIVVDSGLARV
PLYEPGNGMTRLVTARASRASVDQRRGRAGRTEPGVCWRLWPEAATAALEPFARPEILSA
DLAGLTLDCAAWGVTDPTALSFLDPPPAPALAEARAMLADLGALDSDGRLTETGNTLRSL
PLPPRLARMVARAAESGHARMAADLAAVLVERGLGGDAVDLAERLDRFRRDRGGRAADMR
RLAEGWARQAAKAADAVEPDPLMAEPGALLALAYPDRVARARGREGAFLMANGRAGLVDP
VSPLARESFIVVADLTGAAASARILSAVAIASEAIDALFADRIGTVRSVSFDKEARALRA
REGRRLGAVTLDERTLPVPADGEAARVLARGIAGLGLDRLPWTPALAQWRTRVRFLHGAQ
GGAEGGEWPDLSDEALAASVEEWLAPAIVGRTSLAAITADDLGQALQGLVPWTLRARLET
EAPSHVEVPTGSRIPVDYESGPEPVLAVRVQELFGLDRHPALGGGRVPLVLHLLSPAHRP
IQITRDLPGFWRGSWGAVRSEMRGRYPRHPWPEDPLSEAPTRRVKPRGT
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccctatccccgcacttccgatcgaggccgcccttcccgccctgcgcgcggcc
ctgtccgggcgatcctccgccgtgcttgtggccccgcccggcgccggcaagaccacgcgg
gtgccgctggccctgctcgacgaagcttggctcggcgcccaaaaaatcatcctgctggag
ccccggcggctcgccgcgcgtggtgcggccgagcgcatggccgcgactctcggtgagcgg
gtcggcgacacggtgggtctgcgcgtgcggctcggctccaagatctcggcccgcacccgg
atcgaggtcgtcaccgagggtgtgttcacccggatgatcctcgacgatccggaactgacc
gggatcggcgcggtgctgttcgacgagttccacgagcgctccctcgatgccgacctcgga
ctggccttcgccctcgacgcgcagggcgcgctgcgggaggatctgcgcatcctcgtgatg
tcggccaccctcgacggcgcccgcgtggcggggcttctcggtgacgcgcccgtggtggaa
tcggaaggacgcgcctacccggtcgagacccgccatctcgaccgcgacccgaaccagcgc
atcgaggacgcgatggccgccgcgatcctgcgggcgctgagggccgatcccggctcggtg
ctcgcgttcctgccggggcaggcggagatccggcgcaccgccgagcggctggagggccgc
ctgccggacgacaccgacctcgcgcccctctacagcgcccttacccagggcgagcaggat
cgggcggtggcccccgcacctccggggcggcgcaaggtggtgctggcgacctccatcgcc
gagacctcgctgacgatccagggcgtgcgcatcgtcgtcgattcggggctggcccgcgtt
ccgctctacgagcccggcaacggcatgacccggctcgtcaccgcgcgggcctcgcgcgcc
tcggtcgatcagcgccggggccgcgccggccgcaccgagccgggtgtctgctggcggctc
tggcccgaggcggcgaccgcggcgctcgaacccttcgcccgacccgagatcctctcggcg
gatctggccgggctgaccctcgactgcgccgcctggggcgtcaccgaccccaccgccctg
tccttcctcgatccgccgccggcgccggccctggccgaggcgcgggcgatgctggccgat
ctcggcgccctcgattccgacgggcggctcacggagaccggcaacaccctgcgcagcctg
ccgctgccgccccggctcgcccgaatggtcgcccgcgccgccgaatccggtcacgcccgc
atggcggccgatctcgccgccgtgctggtcgagcgcggccttggaggcgacgccgtggat
ctcgccgagcgcctcgaccgcttccgccgcgaccgcgggggccgggccgccgacatgcgc
cgcctcgcggaaggctgggcgcggcaggcggccaaagccgccgatgccgtcgagcccgat
cccctgatggccgagcccggcgccctgctggcgctagcctatcccgaccgggtggcgcgg
gcccggggccgggagggcgccttcctgatggcgaacggccgcgccggcctcgtcgatccg
gtgagcccgctcgcccgcgagtccttcatcgtcgtcgccgacctcacgggcgcggcggcc
tccgcgcggatcctgtccgccgtggccattgcgtccgaggccatcgacgccttgttcgcc
gaccggatcggcacggtgcgcagcgtcagcttcgataaggaggcgcgggccctgcgcgcc
cgcgagggccgccgcctcggcgccgtgacgctcgacgaacgcaccctccccgtccccgcc
gatggggaggcggcgcgggttctggcccgcggcattgccgggctcggcctcgaccgcctg
ccctggacgcccgccctggcgcagtggcgcacccgtgtccgcttcctccacggagcccaa
ggcggggcggagggcggcgaatggcccgacctctccgacgaggccctggcggcgagtgtc
gaggaatggctcgccccggccatcgtcgggcggacctcgcttgcagcgatcaccgccgac
gatctcggccaggccctgcagggtctggtgccctggacgctgcgcgcccgcctggagacg
gaggcgccgagccatgtcgaggtaccgacgggctcgcgcatcccggtcgattacgaatcg
ggccccgaaccggtgctcgcggtgcgggtgcaggagctgttcggcctcgaccggcatccc
gcgctcggcggggggcgggtgccgctggtgctccacctgctctcgccggcccaccgcccg
atccagatcacccgcgatctgccgggtttctggcgcggctcttggggcgcggtccgctcc
gagatgcggggccgctatccccgccatccctggccggaggacccgctcagcgaggccccg
acccggcgggtgaagccgagggggacgtga
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