Candidatus Nucleicultrix amoebiphila: GQ61_00345 Help Entry GQ61_00345        CDS       T04833                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism naf  Candidatus Nucleicultrix amoebiphila Pathway naf03030   DNA replication naf03410   Base excision repair naf03420   Nucleotide excision repair naf03430   Mismatch repair Brite KEGG Orthology (KO) [BR:naf00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     GQ61_00345    03410 Base excision repair     GQ61_00345    03420 Nucleotide excision repair     GQ61_00345    03430 Mismatch repair     GQ61_00345  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:naf03032]     GQ61_00345    03400 DNA repair and recombination proteins [BR:naf03400]     GQ61_00345 Enzymes [BR:naf01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      GQ61_00345 DNA replication proteins [BR:naf03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      GQ61_00345 DNA repair and recombination proteins [BR:naf03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      GQ61_00345    NER (nucleotide excision repair)     GGR (global genome repair) factors      GQ61_00345    MMR (mismatch excision repair)     DNA ligase      GQ61_00345   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       GQ61_00345 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT HHH PADR1_Zn_ribbon DZR_2 Motif Other DBs NCBI-ProteinID:  ARN84054 UniProt:  A0A1W6N2F9 LinkDB All DBs Position 68012..70126 Genome browser AA seq 704 aa AA seqDB search MGNLRAVPVEQLTSDEAEKELAALAREIKYHDDRYYGEDNPLITDAEYDALRIRNHDIEK KFPLLVRPDSPSKRVGYAENTGFKKVTHSKPMLSLDNAFNEEDVEEFLARAKRFLALSDD LNIDVFAEPKIDGLACSLVYEEGKFTRAATRGDGNIGEDITENVRTLREIPHELFTASPP EFIEIRGEIYMTHADFNSLNQKREAEGQSLFANPRNAAAGSIRQLDPKVTAERSLKFFVY GYATYPSFLKTYQESLELLKSWGFPITTLTALCKNKRDIIHYFNDLEAKRSNLPFDIDGA VYKINRLDWQERLGFVARAPRFAIAHKFPPEQGQTTLRNIIIQVGRTGVLTPVAILDPIN IGGVVVSRATLHNQDEINRKDIRIGDRVLIQRAGDVIPQIVKVLNLHSHEREKPFVFPKK CPVCDSHVVQHEGEVAYKCTGGLICSAQASLRLRHFVSKDAFDIEGLGAKHVDAFFQEGL IKTPVDIFTFQERDHKSITPLRKREGWGDKSAQKLFDAINKRRKISLNRFIYALGVPQVG ESTAKVLAKNYGSFKNFRDSMLKAVDFGSSSYQELIAIEGVGPSIAEDILIFFKEPHNLT ILNKLHGDAHHAAQILIEDFVSSNSMASKISEKTIVFTGTLTKFTRAEAKSKAESLGAKV ASSVSAKTDFVVVGADAGSKAKAAQELGVTVLNEDEWLNLIKTD NT seq 2115 nt NT seq  +upstreamnt  +downstreamnt atggggaatctaagggcagttcctgttgagcagcttacttctgacgaagctgaaaaagaa cttgctgctctcgctcgcgaaataaaatatcacgacgaccgttattatggcgaagataat ccgctcattacagatgcagagtatgacgccttaagaatacgtaatcatgacatagagaaa aaatttccactgcttgtgcgacctgattctccatcaaagcgcgttggatatgcagaaaat actggtttcaaaaaagttactcatagcaagccgatgctatcattagataatgcttttaat gaagaagacgttgaagagtttctcgctagagcaaagcgttttttagcgttgtcagacgat cttaatattgatgtttttgctgagccaaaaatagatggtctagcatgcagtttagtctat gaagaaggcaaatttacgcgtgctgctacacgtggtgatggaaatattggggaagatatc actgaaaacgtgagaactttaagagagattcctcatgagttatttaccgcaagtccccct gaatttattgaaattcggggtgaaatatacatgacacatgctgattttaattcgctgaat cagaaacgagaggctgaaggacaatcattatttgcgaatccgcgtaatgctgctgctggg tctatccgacaattagatcctaaagttactgcagaaagatctcttaaattctttgtttat ggttatgcgacatatccgtctttcctgaaaacttatcaagaaagtttagagcttctaaaa tcgtggggatttccgataacaacattgacggcgctttgtaaaaacaaaagagatattatc cattattttaatgatctagaagcaaagcgttcaaacttaccttttgatatagatggagcg gtttataaaattaatcgtttggattggcaggaaaggcttggctttgtagcacgtgctccg cgatttgcgattgcccataaatttccgcctgaacaagggcagacaactctgagaaatatt attatacaggttggcagaacgggagttttaacgcctgttgctatattagatccaattaat atcggtggagttgttgtttctagagctactcttcataaccaggatgagattaatcgtaaa gatattcgaattggagatcgcgtgttgatccaacgtgctggagatgtgattcctcaaatt gtaaaggttcttaatcttcatagtcatgaaagagaaaagccttttgtttttcctaaaaaa tgtcccgtttgtgatagtcacgtagttcaacacgaaggtgaagtcgcttataaatgtaca ggaggcttgatttgttcagcgcaggcatcattgagattaagacattttgtttctaaagat gcttttgatattgagggactcggtgcaaaacacgtggatgctttttttcaagaaggactt atcaaaacgcctgtcgatatttttactttccaagagcgtgatcataagagcataacccct ttgcgtaaaagggaagggtggggtgataaatccgctcaaaaactttttgatgcaattaat aaacgtagaaagatttctctcaatcgatttatttatgccttaggagttcctcaagttggc gaaagtacagcaaaagtcttggctaaaaactatggatcttttaaaaattttagagattcg atgttaaaagctgttgattttggtagtagttcataccaagagttaattgcgattgaaggt gttggaccaagcattgcagaagatattcttatctttttcaaagagcctcataatttgaca atacttaataaactgcatggagatgctcatcatgctgcacaaattctgattgaagatttt gtttcttccaattcaatggcatcaaaaatttctgaaaaaactattgtctttactggcacc ctaacaaaattcacaagagcagaggcaaaatctaaagcagaaagcttaggagccaaagta gccagttctgtatctgcaaaaacagattttgtggttgtcggcgctgacgcaggtagcaaa gccaaagctgctcaagaacttggcgttactgttttgaacgaagacgagtggctcaacctt attaagactgattag

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