Nocardiopsis alba: B005_2105
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Entry
B005_2105 CDS
T02218
Name
(GenBank) ABC transporter family protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02034
peptide/nickel transport system permease protein
Organism
nal
Nocardiopsis alba
Pathway
nal02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B005_2105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nal02000
]
B005_2105
Transporters [BR:
nal02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
B005_2105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
ABC_tran
AAA_21
oligo_HPY
AAA_29
SMC_N
AAA_22
AAA_25
RsgA_GTPase
AAA_23
nSTAND1
AAA_16
AAA_33
NACHT
AAA_15
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AFR09531
UniProt:
J7LA55
LinkDB
All DBs
Position
complement(2193576..2195348)
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AA seq
590 aa
AA seq
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MSEPTTRPRRRRTLRPLPVATLLVLIGYAVLTPWWAGTQTADFSQALLPPGPGQWFGTDH
SGYDLFVRSAEGLRVSLLIALVCAVVATVLGVAVGAVAATVGGRIDRLLMRATDGVNALP
HLLIGVVIVALYPGSLTAIIASISLTHWPQIARVVRAEMLSVRSSEYVEAAYLWGASRGQ
VLYRHLLPAALPQAAVGLVMLVPHAVWHESTLSFLGLGLSPDEASLGTLLEVARGDVFTG
AWWTLAAPAGVLVATTLSVAGLSNALGGRSRSALGRGRGRDPLAEVVTEGSDRDGEGTGA
TSTAPPLVRVRSLTLRLPTEDDRWVHAATGVDLDLRAGELTALVGESGSGKSTLASALCG
LSPAGTRSSGSVSIDGREMLDADERAWRGLRGRTIGLAAQSGAETFTPVRRVGPQIAEVI
DALGTEVSVPELLERVGLEADTADKFPHELSGGMAVRAVTAAALAGEPAVLVADEPTAGL
DPELAAQILLLLRRVADTGTAVLVITHDLQVLETTDVADRMAIMYAGRIVEQGPARDVLT
APEHPYGRALMAALPAHGLHPLPGLPPELTDLPHDHSFADRTGGTDVADR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgaccacgcggccccgccgacgccggaccctgcgtcctctaccggtggcg
acactgctcgtcctcatcggctacgccgtcctcacaccatggtgggcgggaacccagacc
gccgacttctcccaggccctgctcccgccgggccccggacagtggttcggcaccgaccac
tccggctacgacctcttcgtacgctccgccgaggggctgcgggtgtccctcctgatcgcc
ctggtctgcgccgtggtggccacggtcctcggtgtggccgtgggggccgtcgccgccacc
gtcggcggccggatcgaccgcctcctcatgcgcgccaccgacggggtgaacgccctgccc
cacctgctgatcggtgtggtcatcgtggcgctctaccccgggtcgctgacggcgatcatc
gcctcgatctcgctcacccactggccgcagatcgcccgtgtcgtccgcgccgagatgctc
tcggtgcgctcctccgagtacgtcgaggccgcctacctgtggggtgcctcccgcggtcag
gtgctgtaccggcacctgctgcccgcggcgctcccccaggccgcggtgggtctggtcatg
ctcgtcccgcacgccgtctggcacgagtccacgctcagcttcctcggtctggggctctcc
cccgacgaggccagcctgggaaccctcctcgaagtggcgcgcggagacgtgttcaccggg
gcctggtggacgttggccgccccggccggggtactggtggccaccacgttgtccgtggcc
gggctgagcaacgcgctcggcggccgaagccgatccgccctcggtcgcgggcgtggccgg
gacccgctggccgaggtcgtgacggaaggatccgaccgggacggcgagggcacgggggcg
acctccaccgccccaccgctcgtccgagtgcgctccctgaccctgcggctgcccaccgag
gacgatcgttgggtacacgcggccaccggggtcgacctggacctgcgcgcgggcgaactg
accgccctcgtcggcgagtccggttccgggaagtccaccctcgcctcggccctgtgcggg
ctgtcgcccgcgggcacccgatcgtcgggaagcgtgtcgatcgacggccgggagatgctc
gacgccgacgaacgcgcctggcgcggactccgaggccggacgatcggcctggccgcccag
tccggggccgagacgttcacacccgtgcgacgggtgggaccgcagatcgccgaggtgatc
gacgccctgggcaccgaggtctccgtccccgaactcctggagcgggtcggcctggaggcc
gataccgcggacaagttcccgcacgagctctccggtgggatggccgtgcgggccgtgacc
gccgccgcgctcgcgggcgaaccggccgtgctcgtggccgacgaacccaccgccgggctc
gacccggagctcgccgcgcagatcctgctcctgctccgccgggtcgccgacaccggcacc
gccgtcctcgtcatcacccacgacctccaggtcctggagaccacggacgtcgccgaccgg
atggcgatcatgtacgcgggacggatcgtcgaacagggccccgcccgcgacgtgctcacc
gctcccgaacacccctacgggcgggcgctgatggcggcgcttcccgcgcacggactgcac
ccgctcccggggctgccgccggaactgaccgacctgccccacgaccactccttcgccgac
cggacgggaggaaccgatgtcgctgaccgctga
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