Nocardiopsis alba: B005_2110
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Entry
B005_2110 CDS
T02218
Name
(GenBank) helicase conserved C-terminal domain protein
Organism
nal
Nocardiopsis alba
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_16
DUF5669
Motif
Other DBs
NCBI-ProteinID:
AFR07176
UniProt:
J7L358
LinkDB
All DBs
Position
complement(2200366..2203155)
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AA seq
929 aa
AA seq
DB search
MSQTGEPTAAGPAPGTAPLSGAFWPGEPRPYQNDALARVDERWAEGDRRTWIVLPPGAGK
TLVGLEAARRLGRRTVVLVPNTAIQGQWIRHWRAFERPEGCDASGDRALGDAVNVLTYQS
LAVFDPDAETDEEGRSATPVRDRLHANGRALVAALHGAGPLTLLLDECHHLLQVWGRLLA
EILDELPDAHVIGLTGTPAGSLTAAERDLVDRLFGPPIVGASLPALVRDGYLAPFAELVH
VTEPTLTEHEYLAGQGARFAALCTDLLEPGFADTDLLPWLDARFVSRDAEEGGGVAWGTL
AARDPALTDAVLRLHHQGLIALPDGARLHERHRHPPRAEDWTALIGDYARHCLDPDSPRD
REARERIRAALPSVGHHLTRKGVRKGASPVDRVLARSAAKSLATVDILAAEWEAIGPRLR
ALVLCDHERASAHAPAALRGVISDDAGSAWLQVVRLAADPRTSVLEPVLVTGRTVATGPA
TSAALVEFVRSELPSVDPIVREVDGLHVLEGAWTSRSWVGAVTRFLESGRSHVLVGTRAL
LGEGWDARGVNTVVDLTTATTPTAVVQSRGRALRLDPTWPEKVAHTWTVVCVSREHPRGA
ADWDRFVRKHEGYLGVDADGGIMSGIAHVDPELSPYEPPEDPGRVNLRMIERAADREGTR
ARWRLGAGYEDVLLPTLRVRGPRSAPVDHGPDGVVARPEQPEVTVGEGGIVPVPRRLPAA
RDLGLVWIAGPVMAVFLVAGLLMPWLWAPALAAAVLAGASWWRAFGRTAREAERLRALAR
APVETARYACAVADALRSVGLSGTGARGVRIHVDGDGVYRFTLDDPEAAALFTEALDEVL
GPLVGEPRYLVPRYVLTGSDEETVAVFHAVPSASGRNRKHALAFERAWNRWVGPGEVVHT
RSDAGRALLSAHRGNAPLEVSTAHRLTWE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaccggggaaccgacggcggccggaccggcaccgggcacggccccgctgagc
ggcgccttctggccgggcgaaccccgcccgtaccagaacgacgcgctcgcccgggtggac
gaacgttgggccgagggcgaccggcggacctggatcgtgctgccgcccggcgccggcaag
accctggtggggttggaggccgcgcgccggctggggcgccgcaccgtggtgctggtcccc
aacaccgccatccagggccaatggatccgccactggagggccttcgaacgccccgaagga
tgcgacgcgagcggcgaccgggctctcggcgacgccgtcaacgtgctcacctaccagtct
ctggcggtcttcgaccccgacgccgagaccgacgaggagggacgctccgccacccccgtc
cgcgacaggctgcacgccaacgggcgggccctggtggccgccctgcacggcgcgggacca
ctgaccctgctgctcgacgaatgccaccatctgctccaggtctgggggcgtctgctcgcg
gagatcctcgacgaactgcccgacgcccacgtgatcgggctgaccggcacccccgccgga
agcctcaccgccgccgaacgcgacctggtcgaccggctgttcgggccgccgatcgtcggc
gcctccctgcccgccctggtgcgcgacggatatctggcgcccttcgccgaactggtgcac
gtcaccgagcccaccctgaccgagcacgaatacctcgccgggcagggcgcccgcttcgcg
gccctctgcaccgatctgctcgaacccgggttcgcggacaccgacctccttccatggttg
gacgcccgcttcgtctcgcgggacgcggaggagggcggcggtgtggcctgggggacgctc
gccgcgcgcgaccccgcgctcaccgacgcggtactccgcctgcaccatcagggcctcatc
gcgctgcccgacggggcccgtctccatgagcggcaccggcatccgccgagggccgaggac
tggaccgcgctgatcggcgactacgcgcggcactgtctggaccccgattcccctcgggac
cgtgaggcgcgcgaacgtatccgcgccgcgctgccgtccgtgggccaccacctcacccgt
aagggggtccgcaagggcgcctcaccggtggaccgggtcctggcccgcagcgccgcgaag
tccctggccacggtggacatcctcgcggcggagtgggaggccatcggaccgcggttgcgc
gccctggtgctgtgcgaccacgaacgcgcctccgcccacgcaccggcggcgttgcgcggg
gtgatctccgacgacgccggttcggcctggctccaggtggtccggctcgccgccgatccc
cgcacgagcgttctggagccggtgctggtcacgggtcggaccgtggcgaccggaccggcg
acctcggcggcgctggtggagttcgtccgttcggaactcccctcggtggacccgatcgtc
cgcgaggtcgacgggctgcacgtgttggagggggcgtggacctcgcgttcctgggtgggc
gcggtgacgcgcttcctggagagcggccggtcgcacgtgctggtgggcacgcgcgccctg
ctcggggaggggtgggacgcccgcggggtcaacacggtggtggacctgaccaccgcgacc
accccgacggcggtcgtccagagccgggggcgggccctgcggctggatcccacgtggccg
gagaaggtggcgcacacctggacggtggtgtgcgtgagccgtgagcatccgcgcggggcg
gccgactgggaccgcttcgtccgcaagcacgagggctatctgggggtggacgcggacggc
gggatcatgagcggaatcgcgcacgtggatccggagctctccccctacgaaccgcccgag
gatccgggccgggtcaacctccgaatgatcgaacgcgcggccgaccgggaggggacccgc
gcgcgttggcgcctgggcgcgggctacgaggacgtgctgctgcccacgctccgggtgcgc
ggcccgcgttcggccccggtcgaccacggacccgacggggtggtggcccgtccggagcaa
cccgaggtgacggtcggcgagggcgggatcgtgcccgttccgagaaggctgccggccgcg
cgcgacctggggctcgtctggatcgcgggtcccgtcatggcggtgttcctcgtggccggc
ctcctcatgccctggctgtgggcgccggccctggccgccgccgtgctcgccggggcctcg
tggtggcgggcgttcgggcgtaccgcccgggaggccgagaggctccgcgccctggcccgc
gctccggtcgagacggcccgttacgcctgtgccgtggccgacgcgctgcgctcggtcggt
ctctccggcacgggggcgcgaggggtgcggatccatgtggacggcgatggcgtctaccgg
ttcaccctcgacgacccggaggcggcggcgctgttcaccgaggccctcgacgaggtcctg
gggccgttggtcggcgaaccgcgctatctggtcccccgttacgtgctcaccggttccgat
gaggagacggtggccgtcttccacgcggtgccgtcggcctcggggcggaaccggaagcac
gcgctcgccttcgagcgggcgtggaaccggtgggtcggtccgggcgaggtggtccacacc
cgttccgacgcgggccgcgccctgctgtccgcccaccgagggaacgccccgctggaggtg
tcgaccgcccaccgcctgacctgggagtga
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