KEGG   Notothenia coriiceps (black rockcod): 104944295Help
Entry
104944295         CDS       T04920                                 

Definition
(RefSeq) histone deacetylase 4-like
  KO
K11406  
histone deacetylase 4/5 [EC:3.5.1.98]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:ncc00001]
 Environmental Information Processing
  Signal transduction
   04371 Apelin signaling pathway
    104944295
Enzymes [BR:ncc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104944295
Chromosome [BR:ncc03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     104944295
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Unknown
AA seq 1055 aa AA seqDB search
MVDVSSASLPMQVPPGSSAILPMDLRVVDHHPHLHHHAPAPAEQQLQQELVTLKHKQQLQ
RQILIAEFQRQHEQLSRQHEVQLQEHIQHQQDLLALKHQQELLEHQRKMEQQRHEQEIEK
KQREHKLLLLKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRSLNHCMPGDPRFWYGK
TQHSSLDQSSPPQTALSAYCHPMLGTYDSKDDFPLRKTASEPNLKLRSRLKQKVTERRSS
PLLRRKDGPITTAKKRSLDVAESACNSAPGSGPSSPNNSSSNIPNENGVTISSCPGEVSL
LQRLAARDGSVSHLSLYTSPSLPNITLGLPASSVVSGHQDGDSRLALPALQQSIGLTPPF
LPTAHLPSYLASSALDREGAGGGTAGHNPLLQHMVLLEQSHNSMVGLAGLQLMSPSVSKL
ARGHRPLGRTQSAPLPQQQCGQAQALQQLVVQQQHQQFLEKHKQQFQQQQHIINKIMSKP
GDQVSAVGSSASGPGRQHQSHPEETEEELREHQGLSLSPSSSSSPMSAQEMGPLRGMVIK
QEPQDPQEHEERENRERLRDQEQDFMFRQQALLLEQQRIHQLRDYQASMEKAGLSVSFAG
HRPLSRAQSSPASASFPMVVQEPPAKPRFTTGLVYDSLMQKHQCMCGNTTSHPEHAGRIQ
SIWSRLQETGLRAHCECIRGRKASLEELQTVHSEAHVLLYGTNPLRQKLDCSVSPMFVRL
PCGGVGVDNDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTP
MGFCYFNSVAIAAKLLQQRLNVSKVLIVDWDVHHGNGTQQAFYADPNVLYLSLHRFDDGN
FFPGSGAPEEVGSEAGVGFNVNMAFTGGLEPPMGDVEYLAAFRTVVMPIANEFAPDVVLV
SSGFDAVDGHAPPLGGYKLTAKCFGYLTRQLMALAGGRLVLALEGGHDLTAICDASEACV
SALLGNELDPIPDEVLQQRPNANAVHSMEKVLEIQSKYWRSLLRSASTLGCSLSEALRCD
ADEAETVSAMASLSVANKHIGKRAEEEPMEEDAVM
NT seq 3168 nt NT seq  +upstreamnt  +downstreamnt
atggtggacgtgagctcggcatcactgcccatgcaggtgccccccggctcctcagccatc
cttcccatggatctgcgcgtagtggaccaccacccccacctccaccaccacgcaccagca
ccagcagagcagcagctgcagcaggagctggtgacgctcaaacacaagcagcagctccag
agacagatcctgatcgctgagttccagaggcagcatgagcagctgtcgcgccaacatgaa
gtccagctgcaggaacatatccagcaccaacaggacctcctggcccttaagcaccaacag
gagctgctggagcaccagaggaagatggagcagcagcgtcacgagcaggagatagagaag
aagcagcgggaacacaaactcctgctgctgaaaaacaaggagaggggacaggaaagtgca
gtcgctagtacagaggtgaagatgcgacttcaggagtttgtcctgaacaaaaagaaagcc
ctggctcagcgcagcctgaaccactgtatgcccggagacccgcgcttttggtatggaaaa
acccagcacagctctttggaccagagctctcctccccaaactgcattgtcagcctactgc
cacccaatgctgggcacatacgactcaaaagacgacttccctctccgcaaaacagcctct
gagcccaacctcaagcttcgttcccggctaaagcagaaagtgacagagcgccgcagcagc
ccgttactccgaaggaaagatggtcccatcactactgccaagaagcgttccctagacgtg
gccgagtctgcatgcaacagtgcacccggctcaggtcccagctcccccaacaacagctcc
agtaacatccccaatgagaacggggtcaccatctccagctgcccaggagaggtctctctg
cttcagaggttggcagcacgggatggttcagttagccatctctctctctacacctcccct
tctcttcccaacatcaccttgggactgcctgctagctctgtggtgtcaggacaccaagat
ggtgacagtcgtctggcactgcctgcgttacagcagagcattggtctgacccctccattc
ctgcccactgcccacctgccctcctacttggcatcctcggctctggacagggagggggcc
ggagggggcacggctggtcacaaccccctcctccaacacatggtgctgctggagcagagc
cacaattcaatggtgggtcttgctggcctccagctaatgtcgccttctgtctccaaactt
gcgcggggccaccgccccctcgggaggacccagtcggcccccctgccccagcagcagtgt
ggacaggcccaggccctgcagcagctggtcgtccagcagcaacaccagcagttcctggag
aaacacaaacaacagttccaacagcagcagcacatcatcaacaagatcatgtctaagccc
ggggaccaggtgtcggcggtgggctccagcgcctcggggcctggccgtcagcaccagagc
cacccggaggagacggaggaggagctgagggagcaccagggcctctccctgtcgccctcc
tcctcctcctctcctatgtccgcacaggagatggggccccttcgagggatggtcatcaag
caggagccacaggacccccaagagcatgaggagagagagaacagggagagactaagagac
caagagcaggacttcatgttccgacagcaggctctgctgttagagcagcagcggatccac
cagctgagggactaccaggcctccatggagaaggcgggattatcggtcagcttcgccgga
caccgcccgctctccagggcgcagtcgtcccccgcctccgcctccttccccatggtggtg
caggagccccccgccaagcctcggttcactacaggtctggtgtacgactctttgatgcag
aagcaccagtgtatgtgcgggaacaccaccagccacccagagcacgccggccgcatccag
agcatctggtcccgcctgcaggagacaggcctcagggcgcactgcgagtgtatccgcggc
aggaaggcctcactggaggagttacagacggtccactccgaagcacacgtcctgctgtac
ggaaccaacccactgcggcagaaactggactgttcagtgagccccatgtttgtgaggtta
ccatgcggaggagtaggggtggataacgataccatctggaatgaggtccattcatccagc
gcggctcgtctggccgtgggctccgtggtggagctggtcttcaaagtagcatcaggagaa
ctcaagaatggttttgctgtagttcgaccacctggacaccatgctgaggagagcacgcca
atgggcttctgttacttcaactcagtcgccatagcagccaagctgctgcagcagagactc
aacgtcagtaaagtcctcatcgtggactgggacgtccaccatggtaacggtacccagcag
gccttctacgcagaccccaatgttctctacctgtcgctgcatcgctttgatgatgggaac
ttcttccctggcagtggagcacctgaggaggtgggcagtgaagcaggcgtaggcttcaac
gtgaacatggcctttacaggaggacttgaacctcccatgggtgacgtggagtacctggct
gcttttaggacggtggttatgccgattgccaacgagtttgcccctgacgtggttctggta
tcttcaggctttgatgcggtcgacggacacgctccacccctgggaggatacaaactcaca
gccaaatgcttcggctacctgacgaggcagctgatggctctggcaggcggtcgcttggtg
cttgccctggaggggggtcacgacctcacagccatatgtgatgcctccgaagcctgcgtc
tctgccctccttggcaatgagttggaccccattcctgacgaggtacttcaacagagaccg
aatgccaatgctgtccactctatggagaaagttcttgaaatacaaagtaaatactggcgc
tcactgctgcgctccgcctcgacactcggttgctctctgagcgaagcccttcggtgtgat
gcagacgaggcagagaccgtctcagctatggcctcactgtctgtcgccaacaaacacatc
ggaaagagggctgaagaggaaccaatggaagaggacgctgtaatgtaa

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