Notothenia coriiceps (black rockcod): 104961442
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Entry
104961442 CDS
T04920
Symbol
drosha
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104961442 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104961442 (drosha)
03009 Ribosome biogenesis [BR:
ncc03009
]
104961442 (drosha)
03036 Chromosome and associated proteins [BR:
ncc03036
]
104961442 (drosha)
Enzymes [BR:
ncc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
104961442 (drosha)
Messenger RNA biogenesis [BR:
ncc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
104961442 (drosha)
Ribosome biogenesis [BR:
ncc03009
]
Eukaryotic type
90S particles
RNase
104961442 (drosha)
Prokaryotic type
rRNA processing factors
104961442 (drosha)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
104961442 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
SR-25
YcaO
Motif
Other DBs
NCBI-GeneID:
104961442
NCBI-ProteinID:
XP_010788043
UniProt:
A0A6I9PLQ4
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MSFHQDRGSPRGPPGQQGATQNYHPTNMRAPPPQPPVPPYHYDPQAPPGSSYHGNSGYMP
QHSDFMQYPPPAQSHPPNSLNQCPVRPPFPKPPLRQGFPEPPPNFPPPPLPSSTGGPTSG
SAPNAYHPYMMPPVPPPPLAHQSMPPPIASQSMGYHPPYAMNYPPHPPHPPFPPPAFSPG
YNQSPNSFKPEQSFRQGQQYKYEKPMDNRRSPERGYRQEEHRQKGFGYHGDRHKMEFPAE
RKERVRSPDRRGRPEGGRHRPEYDRGHASPAHRGRDRSRERYRHRESRRSQSPDRHRKRP
RSRSTSRDRKRGRWEDERDRRSESSSGPSRERSYSSVRSRESEETFADREREREKERDRE
REKEKEKEKEKEKEKGEDEKVEEDAQLKPAWIRCTHAENYYSNDPMDQVGDSTVVGTSKL
RDLYERFEEELGKRQERAKAVRPMWDPPKTKLDEDPEDSSSESDCESDGEGSTCSSSSDS
DVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEQVK
HCRPMNNNSGKLFHYRITVSPPTNFLAYDIGARSSCSFTGTCLELAERCKLNMPQVLTTV
SGGRSCLPPTLFQTFSSCMDWNLTGPDFEVAGCQRFHFMPRFVRFLPDGGKEVLSMHQVL
LYLLRSSKPLVPEEEIADMLQWEELAWQKYAEECKGMIVTNPGMKPSSVRIDQLDREQFN
PAVITFPVIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQIDKQKLTQREE
ALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDELI
GYVFKERCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMYMRKKGIN
TLINIMSRLGQDDPSPSRINHNERLEFLGDAVVEFLTSVHLYYLFPGLEEGGLATYRTAI
VQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGGLEESRQL
FGRLLFNTQGLQEVWLNYPAHPLQVQEPLTDRQLIETSPVLQKLTNFEDCIGILFTHVRL
LARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVN
NRTQAKVAEELGMQDFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNV
CFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVY
FKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRRERDRQE
KEKEKEKESDEPEESRK
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccaccaggatcgggggagtcccagggggcccccaggtcaacaaggcgccact
caaaactaccatcccaccaacatgagggcccccccaccccagcctcctgttcccccgtac
cactacgaccctcaggcccctcctggctcaagctaccatggaaacagcggctacatgcct
caacactctgacttcatgcagtatcctccaccagcacagtcccacccccctaattctctc
aaccagtgcccggtgcgcccacctttccccaagccccctctccggcagggcttccctgaa
cccccgcctaactttccccctcctcccctccccagctccacaggtggtcccacatcaggg
tctgctccgaatgcctaccacccttacatgatgcctcctgtgcccccaccaccattagct
caccaatccatgccacctcctatagcttctcaatctatgggctaccaccctccatacgcc
atgaactaccctccccatcctcctcacccccctttccctcctcctgcatttagccccggc
tacaatcagagccccaactcgttcaaacccgagcaaagcttcaggcaggggcagcagtac
aagtacgagaagcccatggacaacaggaggtctccagagagagggtatcgccaggaggag
cacaggcagaagggcttcggctaccatggtgacaggcataaaatggaattccctgcagag
aggaaggagcgcgtgaggagtccagacaggcgcggcaggccggagggggggcggcacagg
cctgagtacgacagagggcacgcctcgcccgcacacaggggcagggatcgcagcagggag
aggtaccgtcacagagagagtcggaggtcccagtcgcctgaccggcacaggaagaggcct
agaagtcgttccacgagcagagaccgtaagcgcggtcgctgggaagacgagagggacaga
aggtcagagagctcgtccggcccgagcagagagcgcagctactcgtccgtcaggagccga
gaatccgaggagacgttcgctgacagggagcgagagcgagagaaggagcgggacagagag
agagagaaggagaaggagaaggagaaagagaaggagaaggagaagggagaggacgagaaa
gtagaagaagacgcgcagctgaaacctgcctggatccgctgcacacacgctgagaactac
tactccaatgaccccatggaccaagtgggggactccactgtggtgggcaccagcaagctg
cgggatctgtacgagcgcttcgaggaggagctggggaagaggcaggagagggcgaaggct
gtccggcccatgtgggacccccccaagaccaagctggacgaagacccagaagacagcagc
agtgagtcagactgcgagtcagacggggagggaagcacctgctccagcagctctgactcg
gatgtttttgatgtcatcgctgagatcaagaggaaaaaggctcaccctgaccggctgcac
gacgagctgtggtacaacgaccccggccagatgaatgatggtcccctgtgtaagtgcagt
gccaaggccagacgtacagggatccgccacagcatctacccgggggaggagcaagtgaaa
cattgtcgtccaatgaacaacaactctgggaaactgttccactacaggatcaccgtgtct
cctcccaccaacttcctggcgtacgacatcggagctcgaagctcctgcagcttcacaggc
acgtgtttagagctcgcagagaggtgtaagttaaatatgcctcaagttctaactactgtg
tccggaggcaggagctgtttgcctcctactctgttccagacgttctcgagctgtatggac
tggaacctgacaggtccggactttgaggttgctggatgccaacggttccatttcatgccc
cgctttgtccggttcctaccagatggagggaaggaggtgctgtccatgcatcaggtgctg
ctctacctgctccgtagcagcaagcctctggtccccgaggaggagattgcagacatgctg
cagtgggaggagctggcgtggcagaaatatgcggaggagtgcaagggcatgatcgtcacc
aaccccggcatgaaaccgagctcggtgcgcatcgaccaactggacagggagcagttcaac
ccggccgttatcaccttccccgtcatcgtgcattttgggatccggcctgctcagctcagc
tacgccggggaccctcagtaccagaagctgtggaagagctacgtcaaactacgccacctg
ctggccaacagccccaaggtcaagcagatcgacaagcagaagctgacgcagagagaggaa
gctcttcagaagatccgtcagaagaacaccatgcgccgcgaggtgacagtggagctcagc
agtcagggcttctggaagaccggcatccgctccgacgtctgtcagcacgccatgatgctg
cctgttctcacccatcacatccggtaccaccagtgtctgatgcacctggatgagctgatc
ggctacgtcttcaaggagcgctgcctccttcagctcgccatgactcaccccagtcaccac
ctgaacttcggtatgaatcctgatcacgcccgcaactccctctccaactgtggcatccgc
cagccgaagtacggagacaggaaggtccaccacatgtacatgaggaagaaaggaatcaac
acattgattaacatcatgtctcggctggggcaggatgacccctccccctccaggatcaat
cacaacgagagactggagttcctgggtgatgccgtagtcgagttcctcaccagtgtccac
ttgtactacttgtttcccggtctggaggagggcggcctggccacctacagaacagccatc
gtgcagaaccagcacttagccatgctagccaagaaactggagttggatcgcttcatgctc
tacgctcacggacccgatctgtgccgggagtcggacctgcggcacgccatggccaactgc
tttgaggctcttatcggtgctgtgtatttggagggaggcttggaggagtcccggcagctc
tttggaagactgcttttcaacacacagggtctacaggaggtctggctcaactacccagca
caccccctgcaggtccaggagcctctcacagacaggcagctgatagagacgtctcccgtc
cttcagaaactgacgaacttcgaggactgtattggcattttgttcacacatgtgcgtcta
ctggccagagccttcaccttgaggactgtgggcttcaaccacctcaccctgggccacaac
cagaggatggagttccttggagactccatcatgcagctggtggccacagagtatctcttc
atccacttccctgaccaccacgaaggacatttaacacttctccgcagttcgctggtaaac
aaccgcacgcaggccaaagtggcggaggagttgggcatgcaggatttcgccatcaccaac
gacaagaccaaacgccccgtggctctgcggacgaagactctggctgacctgttggagtct
ttcatcgcagctctctacatcgacaaagacctggagtatgtgcacaccttcatgaacgtc
tgctttttcccccggctgaaggaatttattctcaaccaggactggaatgacccaaagtcc
cagctgcagcagtgctgtttgaccctgaggacagagggcaaggagcccgacatccctctg
tacaagaccctgcagacagtggggccctctcacgcccgcacctacaccgtggctgtgtat
ttcaaaggggagcgaatcggctgtggcaaaggcccaagcatccaacaggcggaaatggga
gctgcaatggatgcgctcgaaaaatataacttcccacagatggctcatcagaagcgcttc
atcgagcggaaatatagacaggagctgaaagagatgagacgagagcgggatcggcaggag
aaggagaaggagaaggagaaggagagcgacgagccggaggagagcaggaagtga
DBGET
integrated database retrieval system
