Nitrosomonas communis: AAW31_04750
Help
Entry
AAW31_04750 CDS
T03942
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
nco
Nitrosomonas communis
Brite
KEGG Orthology (KO) [BR:
nco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AAW31_04750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nco03400
]
AAW31_04750
Enzymes [BR:
nco01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AAW31_04750
DNA repair and recombination proteins [BR:
nco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AAW31_04750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_N
MerR_2
Motif
Other DBs
NCBI-ProteinID:
AKH37266
UniProt:
A0A0F7KCD4
LinkDB
All DBs
Position
complement(1069546..1070163)
Genome browser
AA seq
205 aa
AA seq
DB search
MSRDLLKKYIEKRDFGITGESKGKVGKRAKTNLRFVIQLHEATRIHYDFRLEWHGVMKSW
AVTKGPSYDPADKRLAVRTEDHPMDYNDFEGVIPDKQYGAGPVMIWDKGTWMPEDDPDKM
EREGRITFTIEGSRMKGQWHLIRMRTPDKRENWLLIKSKDDFALNKTKNADFLKRENTSI
VTGRTMDEIRKAGLGKTTKLTKAPN
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtgacctattaaaaaaatatatcgaaaagcgagactttggtattacgggtgaa
tcgaaaggcaaagtcggaaaacgcgctaaaacaaatctgcgttttgttattcagcttcac
gaggcgacccgcattcactatgactttcggcttgaatggcatggggtaatgaaaagctgg
gcggtaactaagggcccgagctacgatcctgcagataaacggctggcagttcgtaccgaa
gatcatccgatggattacaacgattttgaaggcgtcattccagacaaacaatatggtgcc
ggtccggtcatgatttgggataaaggaacctggatgccagaagacgatccagacaagatg
gagagagagggccgtatcacttttacaattgaaggtagccgcatgaaggggcagtggcat
ttgatccgaatgcgcacgccggataaacgcgagaactggcttctcattaaaagcaaagac
gactttgcgctaaataaaaccaaaaacgctgacttcctcaaacgcgagaataccagtatc
gtaacaggccgtactatggacgagattcggaaggcaggacttggcaaaaccaccaagctt
acaaaagcgcccaattaa
DBGET
integrated database retrieval system