Nitrosomonas communis: AAW31_16575
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Entry
AAW31_16575 CDS
T03942
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nco
Nitrosomonas communis
Pathway
nco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAW31_16575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nco03021
]
AAW31_16575
03400 DNA repair and recombination proteins [BR:
nco03400
]
AAW31_16575
Enzymes [BR:
nco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAW31_16575
Transcription machinery [BR:
nco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAW31_16575
DNA repair and recombination proteins [BR:
nco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAW31_16575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AKH39057
UniProt:
A0A0F7KJS4
LinkDB
All DBs
Position
complement(3682023..3683024)
Genome browser
AA seq
333 aa
AA seq
DB search
MSSSPYLIPRIIEVQNITPVLARVIMEPFERGYGYTLGNALRRVLLSSMPGSAATEIRIA
GVVHEYSTLEGVQEDVIDILLNLKNIVFKQHSNTKSVLTLKKNIDGPVTAADIESTHDVE
IVNPDHVIAHIVKGGTIDMQIIVEKGRGYVPANVRRSADMDTQVGSILLDASFSPIKKIS
YSVENARVEQRTDLDKLIIDIETNGSVDPEEAIRYAARVLVDQLSVFAELETTPLPKEQP
KIPQIDPILLRPVDDLELTVRSANCLKVENIYYIGDLIQRTEAELLRTPNLGRKSLNEIK
EVLAARNLSLGMKLENWPPANLENQGKETGHAS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtagcccgtatcttatacctagaataatagaggtccagaatattactcctgtc
ttggctagagtgataatggaaccattcgagcgtgggtatggttatacattgggtaatgca
ttacgaagagttttactgtcctcaatgcctggatctgcagctacagaaattcgaatagcc
ggggtggtacatgagtattctacgcttgaaggcgtacaagaagatgttattgatattctt
ctgaatctcaaaaatatcgtttttaaacagcatagcaatacaaaatctgtattaacattg
aaaaagaatatagatggaccagttactgctgcagatattgagagtacccatgatgttgag
attgtgaatcctgatcacgtcattgcgcatatcgtaaagggtggaactattgatatgcaa
attatcgttgaaaaaggacgcggttatgttcccgctaatgtaagacgttcggcagatatg
gatactcaagttggcagcatattattagatgcctctttcagtccaatcaaaaagattagc
tattctgttgaaaatgcacgcgtagagcagcgtactgatttagataaattaataattgat
attgaaacaaatggatctgttgatcctgaagaagcaattcgatatgctgcaagagtactt
gtagatcaattgtcagtttttgctgagcttgaaaccactcctcttcctaaagagcagcct
aaaataccgcaaattgatccgatattactacgtccagttgatgatttagaacttactgtg
cgttcagcaaattgcttgaaagtagaaaatatttactatatcggagatttaatacaacgt
actgaagctgagctactcagaacgccgaatttaggaagaaaatcacttaatgaaattaag
gaagtgttagcagctcgaaatttatctttaggtatgaaattagaaaattggccaccggct
aatctagaaaatcagggaaaggaaactggtcatgcgtcataa
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