KEGG   Nocardiopsis dassonvillei: Ndas_3018
Entry
Ndas_3018         CDS       T01248                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
nda  Nocardiopsis dassonvillei
Pathway
nda03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ndas_3018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nda03400]
    Ndas_3018
DNA repair and recombination proteins [BR:nda03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Ndas_3018
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Ndas_3018
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_21 AAA_29 AAA_16 APS_kinase nSTAND1 RsgA_GTPase AAA_22 AAA_18 DnaJ_CXXCXGXG nSTAND3 NACHT ATPase Viral_helicase1 cobW ScfRs
Other DBs
NCBI-ProteinID: ADH68428
UniProt: D7B1K2
LinkDB
Position
1:complement(3602954..3605800)
AA seq 948 aa
MSHSMVEQLVVRGAREHNLKDVSLDLPRDSMIVFTGLSGSGKSSLAFDTIFAEGQRRYVE
SLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLWARV
GVPHCPECRREIARQTPQQIVDRVLEMEEGTRFQVLAPVVRGRKGEYVELFKDLQSKGYT
RAVVDGQAVRLDEAPKLGRYDKHDIAVVVDRLSVKPSSRGRLTDSVETALKLAGGTIILD
FVDVEAGDPDREKVFSEHLYCPYDDLSFEQLEPRSFSFNAPYGACAECSGLGTRMEVDPE
LLVPDPEKTLAEGAIGPWSGGPNSGYWERILKAVGEAIGFDLDTPWERLPRRARKALLEG
HDTQVHVSYRNRYGRNRSYYTEFEGVIPWVKRRHSETESDYGRERLEGYMRTVPCPTCEG
TRLKPVVLAVTVGGKSIAEVAQMPLSDSAAFLAGLTLSERDAVIAAQVLKEINARLGFLL
DVGLDYLSLARSSGSLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNARLLETL
QRLRDIGNTLIVVEHDEDTIRAADWVVDIGPGAGEHGGHVVVSGIVDELLTSEDSLTGEY
LSGKRGIEVPVERRPLTRGHELVVRGARENNLHGVDVAFPLGVFTAVTGVSGSGKSTLVN
EILYKALAKELNGARDVPGRHLRVNGMNKVDKVVHVDQSPIGRTPRSNPATYSGVFDHIR
KLFAQTTDAKTRGYQPGRFSFNVKGGRCEACSGDGTLKIEMQFLPDVYVPCEVCHGARYN
RETLQVRYKGKNISEVLNMPISEALEFFEPINAIRRHLQTLADVGLGYVRLGQPATTLSG
GEAQRVKLAAELQRRSTGRTVYVLDEPTTGLHFEDIRKLLGVLNRLTDTGNTVIVIEHNL
DVIKTADHVIDMGPEGGSGGGTVVAQGTPEEVAAVAESYTGRFLAKML
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgtctcactcgatggtcgaacaactggtagtccggggagcccgggagcacaacctcaag
gacgtctcgctggacctgccgcgcgactccatgatcgtgttcaccggcctgtccggttcg
ggcaagtcgtcgctggccttcgacacgatcttcgccgagggccagcggcgctacgtggag
tcgctgtcggcctacgcccgccagttcctggggcagatggacaagccggacgtggacttc
atcgagggcctgtccccggcggtgtccatcgaccagaagtccaccagccgcaacccccgc
tccacagtcggcaccatcaccgaggtctacgactacctgcggctgctgtgggcgcgcgtc
ggcgtcccgcactgtcccgagtgccgccgcgagatcgcccgccagaccccgcagcagatc
gtggaccgcgtcctggagatggaggagggcacccgcttccaggtgctcgcccccgtcgtg
cgcggacgcaagggcgagtacgtcgagctgttcaaggacctgcagtccaagggctacacc
cgcgcggtggtggacgggcaggccgtgcgcctggacgaggcgcccaagctgggccgctac
gacaagcacgacatcgccgtggtcgtggaccgcctcagcgtcaagccctcctcccgcggg
cgcctgaccgactcggtggagacggcgctcaagctggccgggggcaccatcatcctggac
ttcgtggacgtggaggccggggaccccgaccgcgagaaggtcttctccgagcacctgtac
tgcccttacgacgacctgtccttcgaacagctcgaaccgcgctccttctccttcaacgcc
ccctacggcgcctgcgccgagtgctcgggcctgggcacccgcatggaggtcgaccccgaa
ctcctggtccccgaccccgagaagacgctggccgagggcgccatcggcccctggtccggc
gggcccaacagcggctactgggagcgcatcctcaaggcggtgggcgaggcgatcggcttc
gacctggacaccccctgggagcggctgccgcgccgcgcgcgcaaggccctgctggagggg
cacgacacccaggtccacgtcagctaccgcaacaggtacgggcgcaaccgctcctactac
accgagttcgagggcgtcatcccctgggtcaagcgccgccactccgagaccgagagcgac
tacggccgcgaacggctggaggggtacatgcgcaccgtgccctgcccgacctgcgagggc
acccgcctcaagccggtcgtgctcgcggtgaccgtgggcggcaagtccatcgccgaggtg
gcccagatgccgctcagcgacagcgcggccttcctggccgggctcacgctctccgagcgc
gacgcggtcatcgcggcccaggtgctcaaggagatcaacgcccggctcggcttcctgctc
gacgtcggcctggactacctgagcctggcgcgctcctcgggctcgctctcgggcggggag
gcccagcgcatccgcctggccacccagatcggctccggcctggtgggcgtgctgtacgtg
ctggacgagccctccatcggcctgcaccagcgcgacaacgcgcgcctgctggagaccctc
cagcgcctgcgcgacatcggcaacacgctcatcgtcgtggagcacgacgaggacaccatc
cgcgccgccgactgggtcgtggacatcggccccggcgcgggtgagcacggcggccacgtc
gtggtctcggggatcgtggacgagctgctcacctccgaggactccctcaccggcgagtac
ctgtccggcaagcgcggcatcgaggtgcccgtggagcgccgccccctcacccgggggcac
gagctggtggtccggggagcgcgcgagaacaacctccacggggtcgacgtcgccttcccg
ctgggcgtgttcaccgccgtcaccggcgtgtccggctcgggcaagtccaccctggtcaac
gagatcctctacaaggcgctggccaaggagctcaacggggcgcgcgacgtgcccggccgc
cacctgcgggtcaacggcatgaacaaggtcgacaaggtcgtgcacgtggaccagagcccc
atcgggcggaccccgcgctccaacccggccacctactcgggggtcttcgaccacatccgc
aagctgttcgcgcagaccaccgacgccaagacgcgcggctaccagccgggccggttctcc
ttcaacgtcaagggcggccgctgcgaggcctgctccggcgacggcacgctcaagatcgag
atgcagttcctgcccgacgtctacgtgccctgcgaggtgtgccacggcgcccggtacaac
cgggagaccctccaggtccgctacaagggcaagaacatctccgaggtcctcaacatgccg
atctcggaggccctggagttcttcgagccgatcaacgccatccgccgccacctccagacc
ctggccgacgtcggcctgggctacgtgcggctgggccagcccgccacgacgctgtcgggc
ggtgaggcgcagcgggtcaagctcgccgccgaactccagcgccgctccaccgggcggacg
gtgtacgtgctcgacgagcccacgaccggcctgcacttcgaggacatccgcaagctgctg
ggcgtgctcaaccgcctgaccgacaccggcaacacggtgatcgtcatcgagcacaacctc
gacgtcatcaagacggccgaccacgtcatcgacatgggccccgagggcggctccggtggc
ggcaccgtggtcgcgcagggaaccccggaggaggtcgccgcggtggccgagtcctacacc
gggcgtttcctggccaagatgctctga

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