Nocardiopsis dassonvillei: Ndas_3018
Help
Entry
Ndas_3018 CDS
T01248
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ndas_3018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nda03400
]
Ndas_3018
DNA repair and recombination proteins [BR:
nda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ndas_3018
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Ndas_3018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
APS_kinase
nSTAND1
RsgA_GTPase
AAA_22
AAA_18
DnaJ_CXXCXGXG
nSTAND3
NACHT
ATPase
Viral_helicase1
cobW
ScfRs
Motif
Other DBs
NCBI-ProteinID:
ADH68428
UniProt:
D7B1K2
LinkDB
All DBs
Position
1:complement(3602954..3605800)
Genome browser
AA seq
948 aa
AA seq
DB search
MSHSMVEQLVVRGAREHNLKDVSLDLPRDSMIVFTGLSGSGKSSLAFDTIFAEGQRRYVE
SLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLWARV
GVPHCPECRREIARQTPQQIVDRVLEMEEGTRFQVLAPVVRGRKGEYVELFKDLQSKGYT
RAVVDGQAVRLDEAPKLGRYDKHDIAVVVDRLSVKPSSRGRLTDSVETALKLAGGTIILD
FVDVEAGDPDREKVFSEHLYCPYDDLSFEQLEPRSFSFNAPYGACAECSGLGTRMEVDPE
LLVPDPEKTLAEGAIGPWSGGPNSGYWERILKAVGEAIGFDLDTPWERLPRRARKALLEG
HDTQVHVSYRNRYGRNRSYYTEFEGVIPWVKRRHSETESDYGRERLEGYMRTVPCPTCEG
TRLKPVVLAVTVGGKSIAEVAQMPLSDSAAFLAGLTLSERDAVIAAQVLKEINARLGFLL
DVGLDYLSLARSSGSLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNARLLETL
QRLRDIGNTLIVVEHDEDTIRAADWVVDIGPGAGEHGGHVVVSGIVDELLTSEDSLTGEY
LSGKRGIEVPVERRPLTRGHELVVRGARENNLHGVDVAFPLGVFTAVTGVSGSGKSTLVN
EILYKALAKELNGARDVPGRHLRVNGMNKVDKVVHVDQSPIGRTPRSNPATYSGVFDHIR
KLFAQTTDAKTRGYQPGRFSFNVKGGRCEACSGDGTLKIEMQFLPDVYVPCEVCHGARYN
RETLQVRYKGKNISEVLNMPISEALEFFEPINAIRRHLQTLADVGLGYVRLGQPATTLSG
GEAQRVKLAAELQRRSTGRTVYVLDEPTTGLHFEDIRKLLGVLNRLTDTGNTVIVIEHNL
DVIKTADHVIDMGPEGGSGGGTVVAQGTPEEVAAVAESYTGRFLAKML
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactcgatggtcgaacaactggtagtccggggagcccgggagcacaacctcaag
gacgtctcgctggacctgccgcgcgactccatgatcgtgttcaccggcctgtccggttcg
ggcaagtcgtcgctggccttcgacacgatcttcgccgagggccagcggcgctacgtggag
tcgctgtcggcctacgcccgccagttcctggggcagatggacaagccggacgtggacttc
atcgagggcctgtccccggcggtgtccatcgaccagaagtccaccagccgcaacccccgc
tccacagtcggcaccatcaccgaggtctacgactacctgcggctgctgtgggcgcgcgtc
ggcgtcccgcactgtcccgagtgccgccgcgagatcgcccgccagaccccgcagcagatc
gtggaccgcgtcctggagatggaggagggcacccgcttccaggtgctcgcccccgtcgtg
cgcggacgcaagggcgagtacgtcgagctgttcaaggacctgcagtccaagggctacacc
cgcgcggtggtggacgggcaggccgtgcgcctggacgaggcgcccaagctgggccgctac
gacaagcacgacatcgccgtggtcgtggaccgcctcagcgtcaagccctcctcccgcggg
cgcctgaccgactcggtggagacggcgctcaagctggccgggggcaccatcatcctggac
ttcgtggacgtggaggccggggaccccgaccgcgagaaggtcttctccgagcacctgtac
tgcccttacgacgacctgtccttcgaacagctcgaaccgcgctccttctccttcaacgcc
ccctacggcgcctgcgccgagtgctcgggcctgggcacccgcatggaggtcgaccccgaa
ctcctggtccccgaccccgagaagacgctggccgagggcgccatcggcccctggtccggc
gggcccaacagcggctactgggagcgcatcctcaaggcggtgggcgaggcgatcggcttc
gacctggacaccccctgggagcggctgccgcgccgcgcgcgcaaggccctgctggagggg
cacgacacccaggtccacgtcagctaccgcaacaggtacgggcgcaaccgctcctactac
accgagttcgagggcgtcatcccctgggtcaagcgccgccactccgagaccgagagcgac
tacggccgcgaacggctggaggggtacatgcgcaccgtgccctgcccgacctgcgagggc
acccgcctcaagccggtcgtgctcgcggtgaccgtgggcggcaagtccatcgccgaggtg
gcccagatgccgctcagcgacagcgcggccttcctggccgggctcacgctctccgagcgc
gacgcggtcatcgcggcccaggtgctcaaggagatcaacgcccggctcggcttcctgctc
gacgtcggcctggactacctgagcctggcgcgctcctcgggctcgctctcgggcggggag
gcccagcgcatccgcctggccacccagatcggctccggcctggtgggcgtgctgtacgtg
ctggacgagccctccatcggcctgcaccagcgcgacaacgcgcgcctgctggagaccctc
cagcgcctgcgcgacatcggcaacacgctcatcgtcgtggagcacgacgaggacaccatc
cgcgccgccgactgggtcgtggacatcggccccggcgcgggtgagcacggcggccacgtc
gtggtctcggggatcgtggacgagctgctcacctccgaggactccctcaccggcgagtac
ctgtccggcaagcgcggcatcgaggtgcccgtggagcgccgccccctcacccgggggcac
gagctggtggtccggggagcgcgcgagaacaacctccacggggtcgacgtcgccttcccg
ctgggcgtgttcaccgccgtcaccggcgtgtccggctcgggcaagtccaccctggtcaac
gagatcctctacaaggcgctggccaaggagctcaacggggcgcgcgacgtgcccggccgc
cacctgcgggtcaacggcatgaacaaggtcgacaaggtcgtgcacgtggaccagagcccc
atcgggcggaccccgcgctccaacccggccacctactcgggggtcttcgaccacatccgc
aagctgttcgcgcagaccaccgacgccaagacgcgcggctaccagccgggccggttctcc
ttcaacgtcaagggcggccgctgcgaggcctgctccggcgacggcacgctcaagatcgag
atgcagttcctgcccgacgtctacgtgccctgcgaggtgtgccacggcgcccggtacaac
cgggagaccctccaggtccgctacaagggcaagaacatctccgaggtcctcaacatgccg
atctcggaggccctggagttcttcgagccgatcaacgccatccgccgccacctccagacc
ctggccgacgtcggcctgggctacgtgcggctgggccagcccgccacgacgctgtcgggc
ggtgaggcgcagcgggtcaagctcgccgccgaactccagcgccgctccaccgggcggacg
gtgtacgtgctcgacgagcccacgaccggcctgcacttcgaggacatccgcaagctgctg
ggcgtgctcaaccgcctgaccgacaccggcaacacggtgatcgtcatcgagcacaacctc
gacgtcatcaagacggccgaccacgtcatcgacatgggccccgagggcggctccggtggc
ggcaccgtggtcgcgcagggaaccccggaggaggtcgccgcggtggccgagtcctacacc
gggcgtttcctggccaagatgctctga
DBGET
integrated database retrieval system