Nocardiopsis dassonvillei: Ndas_4199
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Entry
Ndas_4199 CDS
T01248
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ndas_4199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nda03019
]
Ndas_4199
03110 Chaperones and folding catalysts [BR:
nda03110
]
Ndas_4199
03029 Mitochondrial biogenesis [BR:
nda03029
]
Ndas_4199
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nda04147
]
Ndas_4199
Enzymes [BR:
nda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Ndas_4199
Messenger RNA biogenesis [BR:
nda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ndas_4199
Chaperones and folding catalysts [BR:
nda03110
]
Heat shock proteins
HSP60 / Chaperonin
Ndas_4199
Mitochondrial biogenesis [BR:
nda03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Ndas_4199
Exosome [BR:
nda04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ndas_4199
Exosomal proteins of other body fluids (saliva and urine)
Ndas_4199
Exosomal proteins of breast cancer cells
Ndas_4199
Exosomal proteins of colorectal cancer cells
Ndas_4199
Exosomal proteins of bladder cancer cells
Ndas_4199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADH69591
UniProt:
D7AV41
LinkDB
All DBs
Position
1:complement(5015330..5016961)
Genome browser
AA seq
543 aa
AA seq
DB search
MAAKLIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEI
ELEDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPISLKRGI
ESAVARINEELGNLSKDIETKEQIASTASISAGDPQIGETIAEAMDKVGKEGVITVEEGQ
TFGLELELAEGMRFDKGYISPYFATDLERMETVLEDPYILIVNSKISNNNEFLPVVEKVL
QAGRPLVVIAEDLEGGALQTLVVNKIRGTFKSVAVKAPGFGDRRKAQLGDIAVLTGGQVI
TEEVGLKLESTELDMLGRARKVVVTKDETTIVDGAGDATAIAGRVNEIRNEIERTDSDYD
REKLQERLARLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGILPGGGVALLQ
ASVPAFEKLELEGDEAIGADIVRRAIAEPLKQIAINAGLEGGVVAEKVKNLEPGFGLNAA
TGEYTDLFKDGVIDPTKVTRSALQNAASIAGLFLTTEAVIAEKPEKAAAPAGDPTGGMGG
MDF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaactgatcgcgttcgacgaggaggcccgtcgcggccttgagcgcggcatg
aaccagctcgctgacgccgtcaaggtcacgctcggccccaagggccgcaacgtcgtcctg
gagaagaagtggggcgcccccacgatcaccaacgacggtgtctccatcgccaaggagatc
gagctcgaggacccgtgggagaagatcggggccgagctggtcaaggaggtcgccaagaag
accgacgacgtcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggcgctcgtt
cgcgagggcctgcgcaacgtcgccgccggcgccaacccgatcagcctcaagcgcggcatc
gagtccgccgtcgcgcgcatcaacgaggagctcggcaacctctccaaggacatcgagacc
aaggagcagatcgcctccaccgcctcgatctccgccggcgacccccagatcggcgagacc
atcgccgaggccatggacaaggtcggcaaggaaggcgtcatcacggtcgaggagggccag
accttcgggctggagctcgagctcgccgagggcatgcgcttcgacaagggctacatctcg
ccctacttcgccaccgacctggagcgcatggagacggtcctcgaggacccctacatcctc
atcgtcaactccaagatctcgaacaacaacgagttcctgccggttgtcgagaaggtcctc
caggccggccgcccgctggtcgtcatcgccgaggacctggagggcggcgccctccagacg
ctggtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttc
ggcgaccgccgcaaggcccagctcggcgacatcgccgtgctgaccggtggccaggtcatc
accgaggaggtcggcctcaagctggagagcaccgagctcgacatgctcggccgcgcccgc
aaggtcgtcgtcaccaaggacgagaccaccatcgtggacggcgccggtgacgccaccgcg
atcgccggtcgcgtgaacgagatccgcaacgagatcgagcgcaccgactccgactacgac
cgcgagaagctccaggagcgtctcgcccgcctggccggcggcgtggccgtcatcaaggcc
ggtgccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtccgc
aacgccaaggccgcggtcgaggagggcatcctgcccggcggtggtgtcgctctgctccag
gccagcgtcccggccttcgagaagctggagctggagggcgacgaggccatcggcgccgac
atcgtgcgccgcgccatcgccgagccgctcaagcagatcgcgatcaacgccggcctcgag
ggcggcgtcgtggcggagaaggtcaagaacctggagcccgggttcggcctgaacgccgcc
accggcgagtacaccgacctgttcaaggacggcgtcatcgacccgaccaaggtcacccgc
tcggctctgcagaacgcggcttccatcgccggtctgttcctgaccaccgaggccgtcatc
gccgagaagccggagaaggccgccgctcccgccggcgacccgaccggtggcatgggcggc
atggacttctag
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