Nitrospira defluvii: NIDE0310
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Entry
NIDE0310 CDS
T01281
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nde
Nitrospira defluvii
Pathway
nde00020
Citrate cycle (TCA cycle)
nde00190
Oxidative phosphorylation
nde00650
Butanoate metabolism
nde01100
Metabolic pathways
nde01110
Biosynthesis of secondary metabolites
nde01120
Microbial metabolism in diverse environments
nde01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NIDE0310 (sdhA)
00650 Butanoate metabolism
NIDE0310 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NIDE0310 (sdhA)
Enzymes [BR:
nde01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NIDE0310 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
HI0933_like
FAD_oxidored
GIDA
Thi4
Motif
Other DBs
NCBI-ProteinID:
CBK40090
UniProt:
D8PA31
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All DBs
Position
complement(275073..276728)
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AA seq
551 aa
AA seq
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MITHDILIVGAGLAGMRAAIAAPPDLNVALLSKVHPVRSHSVAAQGGINAAIGEQDSWEA
HAYDTAKGGLYLGDQDAIEAMCREAPQDILELERMGVIFSRTPEGRIAQRPFGGAGFPRT
CYAADRTGHALLHAMYEQLMKRRCRVYEEWYVTALLVEQGRCCGVMAWDLVHGGLQALRA
KAVILATGGSGRVFSTSTNAVINTGDGMALAYRAGLPLEDMEFVQFHPTTLKDTGILITE
GARGEGGYLLNTLGERFMKRYAPEQMELATRSTVSLAIGQEIQEGRGVDGCVLLDLRHLG
RTRILERLPQIRELALEFAGLDPIETPIPIRPGAHYQMGGVQTNAWGETGLPGLFAAGEC
ACVSVHGANRLGGNSLLETIVFGRRAGTRAAAAIRDYDLRPVPEDVLKSEEQRLNTLLTN
PGPERAWQIRDDLGKTMSLNLGIFRTKQSMQEALGAIQALKARANRMCVQDKGRIFNTDL
IQALELQCLLDIADTIVVSALGREESRGAHYRADFPTRNDSAWLRHTVSHRQEDGPQLSY
APVTITRFPPA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgatcacacatgacattttgatcgtcggagcgggactcgccggaatgcgggcggctatt
gccgcaccgcctgacctgaatgtggcactcctctccaaagttcatccggtccgcagccac
tccgtggcggcccaaggcgggattaacgcggccatcggggagcaggactcctgggaagcc
catgcctatgacacggccaaggggggactgtacctgggcgatcaggatgcgatcgaggcc
atgtgccgggaagctccgcaagacattttagagcttgaacgcatgggagtcatcttcagc
cgcaccccggaagggcgaatcgcccaacggccgttcgggggagccggatttccacgaacc
tgctacgccgccgaccgcaccggacatgcgctgctgcacgccatgtatgaacagctgatg
aagcgacgttgccgggtctatgaagaatggtacgtcacggcgttgctggtcgaacagggc
cgttgttgcggagtgatggcctgggatctggtccatggaggcctgcaggccctgcgcgcc
aaggccgtcattctggccaccggagggagcggccgcgtcttttccacgagtacgaatgcc
gtcatcaacacgggggacggtatggccctggcctatcgcgcgggcctcccgctggaagat
atggagttcgtccagttccatccgaccaccttgaaggacaccggcattctaatcaccgag
ggcgcgcgcggcgagggcggatatctgctgaacacgctcggcgagcggttcatgaaacgg
tatgcgccggagcagatggagctggcgacccgatccacggtgtcgctggccatcggccag
gaaattcaagaaggacgcggcgtcgacggctgcgttttgctcgaccttcgacacctcggc
cgtacccgtattctggagcggctcccgcagattcgagagttggccctggaattcgccgga
ctcgatccgatcgaaacgcccattcccattcggcccggcgcccattaccaaatgggcggc
gtgcaaaccaacgcctggggagaaaccggcctgccgggactcttcgccgcaggcgaatgc
gcgtgcgtgagtgtgcacggagccaatcgcctgggagggaattcactcctcgaaaccatt
gtcttcgggcgtcgtgccggcacgagagccgccgccgcgatccgcgactacgacctgcga
ccagttcccgaagacgtcctcaagagtgaagaacagcgactgaacaccttgctgaccaat
ccaggcccggagcgggcctggcagatacgggatgacctcggtaagaccatgagcctcaat
ctaggcatctttcgcacgaaacagtccatgcaagaggctctgggggccattcaagccctc
aaggcccgtgcaaaccggatgtgcgttcaggacaaaggacggatcttcaacaccgacctg
atccaggcgcttgaactccagtgcctactcgacatcgcagacaccatcgtcgtgagcgcc
ctcggacgggaagaaagccgcggggcccactatcgggccgatttcccgactcgaaacgac
agtgcgtggctccgtcacaccgtcagccaccgtcaggaggacggcccgcagctgagctat
gcccccgtcaccattacacgattcccgcccgcataa
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