Nitrospira defluvii: NIDE1878
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Entry
NIDE1878 CDS
T01281
Name
(GenBank) conserved protein of unknown function, radical SAM
Organism
nde
Nitrospira defluvii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
CBK41605
UniProt:
D8PEE6
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Position
complement(1769614..1771806)
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AA seq
730 aa
AA seq
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MAKPRVLLVIPPLTQLNTPYPATAYLTGFLRSRGYETAQADLGLEMVLRLFSRSGLEQAF
TRIKQTDRPWRGEIQQILALEDAYLETIEPVIAFLQGKDPMLAPHLARPGFLPEGPRFAA
DRRPGEGSLAASPTDTARHRATLYIEDLTDLLQSTVAPHLFLNRYAEQIMQATSSFDRIE
DALTRPLSLTDELLLEALRPHLHRTVPDVVGLTIPFPGNLFGALRIAQAIKAQSPQIVIV
LGGGYVNTELRRLEDPRLFQYVDYVTLDDGERPFLCLLEHLAGNRPEPLLRRTFLCKDGR
VIFRDGSNEADIPMHELGRPTYAGLPLTDYLSILDSLNPMHRLWSEGHWNKLTVAHGCYW
KQCTFCDVGLNYISRYEMTPTDVLIDQIEALIQETGQRGFHFVDEAAPPAALKALALRLL
ETGLTISWWGNIRFEEAFSPDLARLLAASGCIALTAGLEAASDRLLERMKKGITVDQTAR
VAAAFRQAGILVHAYLMYGCPGETIADTVDSLERVRQLFANHLLQSAFWHKFTATAHSPI
GLNPAAEGLTILGPRFAGFAENDLRHSDPNATCPAWLGEGLRAALLNYMEQAGFDIPAQR
WFSHRVKPPRVTKTWLTQALEASSDVPLTAERRCVWTGGRPVIAATGRTRTRVILPTRTE
DFTISLASPHTEWLLRFLHASTPSPRRTNYDYPRLAEVRDRFPAAGARGFDRFSRSAAWQ
SIRQAGLLLV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccacgcgtcctccttgttattcctccgttgacccaactgaatacgccctat
cctgcgaccgcctacctgacgggcttcctgcgctcacggggatatgagaccgcgcaagcc
gacctcggcctcgaaatggtgttgcgcctcttctctcgatcagggctggagcaggcgttt
acccgcatcaagcagacggatcggccgtggcgaggggaaatccaacagatcctggcgctt
gaagacgcgtatctcgaaactatcgagccggtgatcgcgtttctccaagggaaggacccg
atgttggctccccacctcgcacgcccgggatttcttccggagggcccccgttttgccgct
gatcgtcggcccggagaaggatcgctcgcagcctcgccgacggacaccgcccggcaccgc
gccacgctgtacattgaggacctgacggacctcctccagagtaccgtggctccccacctg
tttctcaatcgttacgccgagcagatcatgcaggccacctcgtcgttcgaccggatcgaa
gacgccctgactcgacctctcagcctcacggacgaattgctgctcgaggcgctccggcca
catctccaccgaaccgtacccgatgtcgtaggcctcacgattccctttcccggcaatctg
ttcggcgcgttgaggattgcgcaggcgatcaaggcacaatcaccacagatcgtcattgtc
ctgggcggcggatatgtgaacaccgaactgagacgactcgaagacccacgactgttccag
tacgtggattatgtgacgctcgacgacggggaacgcccgttcctctgcctcctggagcac
ctggcaggcaatcgaccggagcccctgctccggcggacatttctctgcaaagacgggcgc
gtcatatttcgagacggcagtaacgaagcggacattccaatgcatgagctcggccgaccg
acctatgccggactcccgctgaccgactacctctcgatcctcgacagcctgaaccccatg
catcggctctggtcggaaggccattggaacaagttgaccgttgcgcacggctgttattgg
aagcagtgcacgttttgcgatgtcgggctgaactatatttcgcgttatgagatgacgccg
acggacgtcctgatcgaccagatcgaggcgttgatacaagaaaccgggcaacggggcttc
cattttgtcgatgaggccgcaccgccggccgcgctcaaagccctggcccttcgcctgctg
gaaaccggcctgaccatttcctggtgggggaacattcgattcgaagaggcgttctccccc
gatttggcaaggctgctggcggcatccggctgcatcgccctcaccgccgggctcgaagcg
gcatcggatcgcttgctggagcggatgaaaaaaggaattacggtagaccaaacagcgcgg
gttgcggcggcatttcgccaggccggcatcctggtccatgcctatctcatgtacgggtgt
cccggtgagaccattgccgacacggtggattcactggaacgtgtgcgacaactgtttgcg
aaccatctcctgcagtccgccttctggcacaaatttacggccaccgcccacagtcccatc
gggctcaacccggccgcggaaggcctcacgatcctcggtccgagattcgcaggatttgcc
gaaaatgatctccgtcattctgatcccaacgccacctgcccggcctggctcggcgaaggc
ctgcgcgccgccttgctcaactacatggaacaggccggattcgatattccggcacaacgc
tggttctcacatcgggtgaaaccgccacgggtgacgaagacctggctcacgcaggcgctg
gaggcttcctccgacgtgccactgaccgccgaacggcgttgcgtctggaccggcggccgg
cctgtaatcgcggcaaccggacgtacgcgcaccagggtcattctcccgacacgcacagaa
gattttacgatcagcctggcgtctccgcacaccgaatggttgctccgcttcctgcacgca
tcgactccttcgccccgccggacgaactacgactacccgcgcctggccgaagtccgtgat
cgctttccggccgccggcgcacgcggattcgaccgattcagcagaagcgccgcctggcag
tcgatccgccaagcaggcctcctcctcgtgtaa
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