Nitrospira defluvii: NIDE3635
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Entry
NIDE3635 CDS
T01281
Symbol
prfC
Name
(GenBank) Peptide chain release factor RF-3
KO
K02837
peptide chain release factor 3
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
nde03012
]
NIDE3635 (prfC)
Translation factors [BR:
nde03012
]
Prokaryotic type
Release factors
NIDE3635 (prfC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
RF3_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CBK43314
UniProt:
D8PJ77
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All DBs
Position
3634651..3636279
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AA seq
542 aa
AA seq
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MSLPVEKSAADELRREVLRRRTFAIISHPDAGKTTLTEKLLLYAGAVHLAGAVQARSTQR
QAKSDWMELEQARGISITSTMLQFDYQGARVNLLDTPGHQDFSEDTYRTLMAVDSAVMVL
DGAKGIEPQTKKLFAVCRKRGIPILTFINKMDQPGRHPFDLLDEIERTLGMTAVPFNWPI
GEGSGFQGVYDFQHRQVLFFQRTAHNQRRAPMTVEAFPNPKLAETLGEAYGPLQEEIGLL
TGAGTSFDRDRFLAGELTPVFFGSALTNFGVGPFLDAFTKLAPPPGPRQTAQGLIQPTDE
AFSGFVFKIQANMDPQHRDRMAFLRICSGRFEKDMMVHHARLGRKIRMTRPHRLFGRDRE
TIDEAYPGDVVGLVNPGLFTIGDTLTSDPALTFDPIPHFPPECFGLLRTQDISKHKQFQK
GLKQLEEEGVMQIFYSPDHVRREPVLAAVGELQFDVVMSRLENEYGVKTSVERLPHALAR
WIVGNPATILAVYWPSDTIRLVDQQGRGVMLFTTEHLLAYCIKSNPSIKFLLREEVEQAT
AQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgccggttgagaaatctgcggccgatgaattgcggcgagaagtgctgcgacgg
cgcacgtttgccatcatttcccatccggacgccggaaaaacaaccttgaccgaaaagctg
ctgctgtatgccggcgcggtgcacctggcgggcgcagtgcaagcccgctccacccagcgc
caagccaagtccgactggatggaattggagcaggcgcgcggcatttcgatcacctccacc
atgctgcagttcgactatcaaggcgcgcgggtcaacctgctcgacacaccgggccaccag
gacttcagcgaagacacgtaccgcacgctcatggcggtcgacagcgccgtcatggtgctg
gacggcgccaagggtatcgagccgcagaccaagaagctcttcgccgtctgccgcaagcgc
ggcatcccgatcctgaccttcatcaacaagatggaccagccgggccgccatccgttcgac
ctgctggatgaaatcgagcgcaccctggggatgacggcggtgcctttcaattggccgatc
ggcgaagggtccggctttcaaggggtgtacgattttcaacaccgccaggtactgtttttc
cagcggacggcgcacaatcagcgtcgcgccccgatgacggtcgaggcctttcccaatccg
aagctggcggaaaccctcggcgaggcctatgggccgctgcaggaagagatcgggctgttg
acgggcgccggcacctcattcgatcgcgaccggttcctcgcgggagaactgacgccggtc
ttcttcggcagcgcgttgaccaatttcggcgtcgggccgttcctggatgcctttaccaaa
ctcgcgccgcctcccggaccgcgccagacggcccaggggttgatacaaccgaccgacgaa
gcgttctccggcttcgtgttcaagattcaggcgaacatggacccgcagcatcgcgaccgc
atggccttcctccgcatctgctccggccgcttcgaaaaagacatgatggtccatcacgcc
aggctgggccgcaagatccggatgacacgcccccatcgcctgttcggccgcgaccgcgaa
acgatcgacgaggcctaccccggcgatgtcgtcggattggtcaaccccgggctgttcacg
atcggagacaccctgacctcggatcccgcgctgaccttcgatcccattccgcactttccg
ccggaatgtttcggcctcttgcgcacgcaggacatttcgaaacacaaacagtttcaaaaa
gggctcaagcagctggaagaagaaggggtcatgcaaatcttttattcaccggatcacgtg
cgtcgcgaaccggtgttggctgcggtaggtgaattgcagttcgatgtcgtcatgtcgcgg
ctggagaatgagtacggggtgaagacatccgtggagcgcctgccccatgcgctggcccgc
tggatcgtcggcaatcccgcgacgattttggccgtctattggccgtcggacaccatccgg
ctcgtggatcagcaaggccgcggcgtcatgctgttcaccaccgaacatctcctggcctat
tgcatcaaatcgaacccgtcgatcaaatttctgttgcgggaagaagtcgagcaggccacg
gcgcaatag
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