Aspergillus fischeri: NFIA_106390
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Entry
NFIA_106390 CDS
T01070
Name
(RefSeq) WD repeat protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
nfi
Aspergillus fischeri
Pathway
nfi03420
Nucleotide excision repair
nfi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
NFIA_106390
09124 Replication and repair
03420 Nucleotide excision repair
NFIA_106390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfi04121
]
NFIA_106390
03400 DNA repair and recombination proteins [BR:
nfi03400
]
NFIA_106390
Ubiquitin system [BR:
nfi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
NFIA_106390
DNA repair and recombination proteins [BR:
nfi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
NFIA_106390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
4593604
NCBI-ProteinID:
XP_001267048
UniProt:
A1CWZ9
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MVSGGADPSIHFWDLESRGAELDHVHRPIASIHKGSHEDAHTHAITSVSIYPFDPTPSTI
LTTAHDGSLKLSALAPGAITPMHTFRLDCTPYSHSMSSHPSSTLLIAVGTSERAVRLLDL
RSGLSTHGLPGHSSAVLSVAWAPHRPHILASASADNRVILFDVRRGGHNSAIATLDMDDA
VGLVHPQCAPASYQSRAPFSPHARAHNGAVTGVRWTSTGMHLVTAGQDARIRVWDASTGA
NTLVHLGPRVRNGVSSHLAERAPLIVPRGLMAPGQETLLWANFNEHDDRGEIFMFELREG
TFIKRLKVPALMAGRQQIRGRSNALSAARINSLVWRGNGGSGEGLEMFSAHGDGTIRAWV
SREPEGEPDEAEEAEQADRKRKRDVLDEIYRGFVAPSTPA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggtttccggtggcgcagacccatcaatccatttctgggatctggaaagcagaggtgcc
gagttggatcatgtccaccggcctatcgcctctatccacaagggatcccacgaagatgcc
catacgcatgcgatcacgtcggtctcaatatacccgtttgatccgactccatctacaata
ttgactactgcccatgatggaagtcttaagctctctgccttggcgcctggcgccattacg
cctatgcatacattccggcttgactgcacgccttactctcattccatgtcgtcgcatccc
agttccacgcttcttattgcagtaggcacatcagagagagcagtccgcttgctcgacttg
cgatccggtctatctactcacggacttccgggccatagctctgcagttctctcagttgca
tgggcccctcaccggccgcatatcctcgcctcggcatcagcagacaaccgcgtgattctg
tttgacgttcgaaggggcggtcacaattccgccattgcaacccttgatatggatgatgca
gtcggtctagttcatccgcagtgcgccccggcatcctaccaaagccgcgcgccgttctcg
ccccacgcccgcgcgcacaatggtgctgtgaccggtgtccgttggacatcaactggcatg
cacctcgttacagccggtcaagatgcccgaatccgagtttgggacgcctccacaggtgcc
aatacccttgtccaccttggacccagggtccggaatggcgtgtcttctcatcttgccgag
cgggctccgctgattgtgccccgtggactaatggctccagggcaagagacactcctgtgg
gccaatttcaacgaacacgacgaccgcggcgagattttcatgtttgaacttcgagagggg
acgttcatcaaacgtctcaaggtccccgctctaatggccggtcggcagcaaatccgcggg
cgatccaacgccctcagcgccgcccggattaattctctggtatggcgcggcaatggcggc
tcaggcgaaggactggagatgttctccgcgcacggcgacgggaccatccgcgcctgggtc
tcccgggagcccgagggcgagcccgacgaggccgaagaggctgagcaagcggatcggaaa
cggaaacgagatgtccttgacgagatctaccgggggttcgtcgccccttctacgccagca
tag
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integrated database retrieval system
