Nostoc flagelliforme: COO91_11058
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Entry
COO91_11058 CDS
T05266
Name
(GenBank) recD, exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nfl
Nostoc flagelliforme
Pathway
nfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COO91_11058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfl03400
]
COO91_11058
Enzymes [BR:
nfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
COO91_11058
DNA repair and recombination proteins [BR:
nfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
COO91_11058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
PIF1
DNA_pol_lambd_f
HHH_2
UvrD-helicase
UvrD_C
Helicase_RecD
AAA_22
nSTAND3
AAA_16
Mg_chelatase
AAA
NACHT
HHH
Motif
Other DBs
NCBI-ProteinID:
AUB44811
UniProt:
A0A2K8TAW9
LinkDB
All DBs
Position
pNFSY08:complement(595308..597557)
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AA seq
749 aa
AA seq
DB search
MSTSQTPIQQQVNVTPQHEIITGVIERLTFHSEESGYTVARLVRPRFRDLTTIVGSFANI
QPGQTLQLTGFWREHPQFGPQFQVTNYKETKPATLTGIEKYLGSGLIKGVGPVTAKRIVA
HFGLETLDIIENQIERLIEVQGIAKKRITLIKNAWSTQKAIKEVMVFLQSHGVSTTYAVK
IYKQYQDKAIDTVTHNPYQLATDIYGIGFLTADKIARNLGVAPDSEFRYCAGITHALSEA
AEDGHCYLPQPELIEKVIKLLTTEEHQPTEDAITNIIKDMGAREELVRERIRDDYGEKLL
LCYLPTFFHTEQNLAQLISRRLRQPIAQDMPRVRGWIERFTASHKIQLSQQQQQAVEMAA
YSPFMILTGGPGVGKTFTTHTIVSLWKAMGKSIALAAPTGRAAQRLSEMTRLEAKTIHRL
LEFDPKKMGFKCGSDNPLPHTAIIVDEASMLDLFLAHSLVKAVAEGAQLLLVGDIDQLPS
VGPGKVLADLINSLQVPVVRLTQVFRQAQQSAIISAAHQINQGEYPALEPISDNPVSDCI
WHGGGNQPEHGVQAICELITDLIPRLGFNPATDVQVLCPMSRGLVGTRNLNAVLQQLINP
PSLDLVEINRGGMILREGDRIIQLTNDYNREVFNGDLGNILSIDTVEQEVTVDYGGRAVV
YDYADLNEITLAFAVSVHKSQGSEYPVVIFPLYMQHYMMLSRNLFYTGLTRARKLAIIIG
DKKAISLAVRTTDDQQRYTRLWQRLLQPI
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccaaactcccatccagcaacaagttaacgttactccccagcatgaaata
atcactggagtaatagaacgtttgaccttccactcagaggagtcggggtatacagtggcg
cgtttggtacgccccagatttagagatttaaccacaatcgtcggtagttttgccaacatt
cagccagggcagacacttcaactaacaggcttttggcgagagcatccccagtttgggcca
caattccaagtcaccaattataaagaaaccaaaccagcaacactcaccggaattgagaaa
tacttgggcagtggattaatcaaaggagttggtccagtcacagccaagcgtatcgttgca
cattttggtttggaaacactcgacatcattgaaaaccaaattgagcgactgattgaagtc
cagggtattgccaaaaagcggatcactctgatcaaaaatgcctggtcaactcagaaagcg
attaaagaagtgatggtatttttgcaaagccacggcgtttcaacaacatacgcggtgaag
atatacaagcaataccaggacaaagctattgatacagttacccataatccatatcagtta
gcgaccgatatctacggtataggttttcttacagctgacaagattgcgcgtaacctggga
gttgcacctgatagcgaatttagatactgcgctggaataacccatgctctaagtgaagcc
gcagaagatggtcactgctacttaccacagccagagctaatcgaaaaagtcatcaagctg
ctgacaactgaggagcatcagccgacagaagatgcgataaccaatatcatcaaagatatg
ggtgccagagaggagttggtcagggagaggattcgagatgattatggcgagaaactacta
ctgtgctacttaccaacgtttttccatactgagcagaacttagcgcaattaatctctcga
agattacgccaaccgattgcacaggatatgcctcgtgttcgtggttggattgaacgtttt
accgctagtcacaaaatacaactatcgcaacagcagcagcaagctgtggagatggcggct
tattctccatttatgattctcactggcggtcctggcgtggggaaaactttcaccacccat
acaatagtcagcttgtggaaagcaatgggtaaatctattgctctagctgcaccaacgggg
agagcagcacaaagactatccgaaatgacccgacttgaagcaaagaccatacatcgccta
ctggagtttgaccccaagaaaatggggtttaaatgcggtagcgataaccctttgccgcac
accgcaattattgttgatgaagcttcaatgcttgacctattcctagcacactctttggtg
aaagcagtagcagaaggagcgcaactattattagtaggtgatatcgaccagcttccctca
gttgggccaggaaaagtattagctgatctaataaattcgcttcaagtaccagtagttcgg
ctaacgcaagtatttaggcaagcccaacagagcgcaatcatcagcgctgcacaccaaatt
aaccagggagaatatccggcgcttgagccaatctctgataatccggtgtcagattgtatt
tggcatggtggaggaaatcagccagaacacggggtacaggcaatctgtgaactgatcacc
gatttgattcctcgactgggctttaatccggcaacagatgtgcaagtactttgtcccatg
tcgcggggactggtgggaactcgcaacttgaacgctgtgttgcaacagctgatcaatccg
cctagccttgacttggtagagattaataggggtggcatgattctacgtgaaggcgatcgc
attatccaactaaccaatgactataaccgtgaggtgtttaacggtgatttagggaatatc
ttgagcattgacaccgtagagcaagaagttacagttgattatggtggtcgggctgttgtt
tacgattatgctgacctgaatgaaattactctggcgtttgctgtctcagtgcataaaagc
caaggctcagagtatcctgtggtgatatttccattgtatatgcagcattatatgatgcta
tcgcgtaacctattttatacagggcttacccgtgcaaggaagttggcgatcataatcggt
gacaaaaaagcaatatctttggctgtgcggactacagatgaccagcagagatatacacgg
ttgtggcagaggttgttgcagccgatttga
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