Nothobranchius furzeri (turquoise killifish): 107377924
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Entry
107377924 CDS
T05163
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04120
Ubiquitin mediated proteolysis
nfu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107377924 (syvn1)
04120 Ubiquitin mediated proteolysis
107377924 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107377924 (syvn1)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107377924 (syvn1)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107377924 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
107377924
NCBI-ProteinID:
XP_015803407
UniProt:
A0A1A7ZX24
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Position
sgr01:3062001..3083433
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AA seq
628 aa
AA seq
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MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHLRVLSLLGLLGVMDFLFVNHACHSIISRGASVQLVFGFEYAI
LLTMILTTLIKYVLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPPAAQPPAPAPAAPANAA
AAPAHNVAPGMLPGFPPGVFPFWGPFPAGPPAAAAAAPAPGATDAPQSSTETAGTSTTTS
ADATTSAAAAPGSAIPGFPFSFPPPPFPSAPWLPMPPPPPFVSSMPPPPPSLSQLSEEEL
RELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLAPPRPDSSTGNPSGTNVS
SPPAATSTESPTTEDTSISEEASGARVSCQPTDSTSSASDAERTENTDEGVMEDDGMGEP
SAAELRRRRLRKLETASPSSSPPPPPDN
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggtccgagcagccttggtgactgccaccagtctggccctgacgggggcggtggtggct
cacgcgtacctgctcaaacaccagttctaccccaccgtggtgtacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcgtttgtgttggtgtttctgctggggaagttc
atgagaaaagtcttttttggtcaactcagggctgctgaaatggagcatctgatcgagcgc
tcctggtacgcggtcaccgagacgtgtttggctttcaccgtgttcagggatgatttctcc
cctcgttttgtcgcccttttcaccctcctgctcttcctgaagtgctttcactggctggct
gaagaccgggtggactttatggagcggagtccaaacatatcttgggtttttcatttgaga
gttttgtctctcctgggtctactgggggtcatggacttcttgtttgtcaaccacgcctgt
cacagcatcatttcccgaggagcttcagttcagcttgtttttggatttgagtacgccatc
ttgctgaccatgatcctgacgacgttgatcaagtacgttctgcacaccatcgacctgcag
agtgagaatccctgggacaacaaggccgtctacatgctctacacggagctcttcacaggt
tttatcaaagtgctcctgtacattgctttcatgaccatcatgataaaggtccacaccttc
cctctgtttgccatccggcccatgtacctggccatgaggcagtttaagaaagctgtgact
gatgccataatgtctcggagagctatccgcaacatgaacacactatatcctgatgctact
cctgaagacctgcaggcctcggacaacgtttgcatcatctgtcgagaggaaatggtcacc
ggagccaagaaactaccttgtaaccatattttccactccagttgcctgcgctcctggttc
cagaggcagcagacctgtccaacctgccgaatggatgtcctcagagcgtccaacaacaat
cagactccacctgcagcccagccgccagccccggccccagcagcccccgctaacgcagca
gcagccccggcccataatgtggctccaggaatgctgccaggcttccctcctggcgtcttc
cctttctggggtccttttcccgcagggcctccagctgcagcagcagcagctccagctcct
ggtgccactgatgctcctcagagcagcacagagacagccggcaccagcaccactacatct
gcagacgcgactacatccgcagcagcagctccaggatcagcaatcccaggattccccttc
tcgttcccccctccccccttcccctctgcaccatggctgcccatgcctccacctcctccc
ttcgtgtcctcgatgcctcctccccctccatcgctgtctcagctgtcggaggaggagctg
agggagctggaggccgaagggcggcgcggcctcgaggccaggctgcagtgtctccagaac
atccacaccctgctggatgccgccatgctcaacatccaccactacctcagcactgtggcc
acactcgctcctccccgacctgacagcagcactgggaaccccagtggaaccaacgtttcc
tctcctccagctgccaccagcacagagagtcccaccacagaggacacgtccatctctgaa
gaagccagcggcgccagagtctcctgccagcccacggactccacctcctcagcttcagac
gccgaaagaacagagaacacggatgaaggcgtgatggaggacgacggcatgggagagcca
agtgccgccgagctgaggcgccgccgtcttcgcaagctagagacggcatcaccgtcatcc
tcgccgccccctcctccagacaactga
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