Nothobranchius furzeri (turquoise killifish): 107380949
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Entry
107380949 CDS
T05163
Symbol
pc
Name
(RefSeq) pyruvate carboxylase, mitochondrial isoform X1
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu00020
Citrate cycle (TCA cycle)
nfu00620
Pyruvate metabolism
nfu01100
Metabolic pathways
nfu01200
Carbon metabolism
nfu01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
107380949 (pc)
00620 Pyruvate metabolism
107380949 (pc)
Enzymes [BR:
nfu01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
107380949 (pc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
RnfC_N
ATP-grasp_3
ATPgrasp_ST
NQRA
GCV_H
Oxidored_nitro
Motif
Other DBs
NCBI-GeneID:
107380949
NCBI-ProteinID:
XP_015807859
UniProt:
A0A1A8A9E5
LinkDB
All DBs
Position
sgr06:66578648..67051604
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AA seq
1180 aa
AA seq
DB search
MMLQFAVVRGGLGLLAVRRACLFSRSSHSAPQAQYRPIKKVMVANRGEIAIRVFRACTEL
GIRTVAVYSEQDTGQMHRQKADEAYLIGKGLPPVAAYLDIADIIKVAKDNKVDAIHPGYG
FLSERADFAQACADAGVMFVGPSPETVRKMGDKVEARSLAISAGVPVVPGTDAPIASLQE
AQAFAQTYGFPIIFKAAYGGGGRGMRVVREYEELEENYQRAYSEALTAFGNGALFVEKFI
ERPRHIEVQILGDKYGNVIHLFERDCSIQRRHQKVVEIAPAFQLDPHLRDRLHSDAVSLA
KQVGYENAGTVEFLVDKHGKHYFIEVNSRLQVEHTVTEEITDVDLVHAQLRICEGRSLPE
LGLKQDKIRVNGCAIQCRVTTEDPSRGFQPDTGRIEVFRSGEGMGIRLDSASAFQGAVIS
PHYDSLLVKVIASGKDLHTASSKMSRALAEFRVRGVKTNIPFLQNVLSNNQFLHSTVDTQ
FIDENPELFNLKPTQNRAQKLLHYLGHVMVNGPTTPIPVKAKPSSIDPAVPSVTMGDPPV
GFRDVLLRRGPEGFAKAVRAHQGLLLMDTTFRDAHQSLLATRVRTHDLKIISPFVSHNFS
NLFSLENWGGATFDVAMRFLSECPWKRLQELRALIPNVPFQMLLRGANAVGYTNYPDNAV
FKFCEVAKENGMDIFRVFDSLNYLPNMLLGMEAAGAAGGVVEAAISYTGDVSDPMRQKYS
LDYYVKLADELVKAGTHILSVKDMAGLLKPEASKLLIGALRDRFPDVPIHVHTHDTAGAG
VAAMLACAEAGADVVDVAVDSMAGMTSQPSMGAMVACTKGTKYDTGIALEKVFDYSEYWE
VTRGLYAPFDCTATMKSGNADVYENEIPGGQYTNLHFQAHSMGLGNKFKEVKKAYTEANK
LLGDLIKVTPSSKIVGDLAQFMVQNNLTRAEVEERADELSFPLSVVEFLQGYVGIPHGGF
PEPFRSKVLKSLPRIEGRPGASLPPMDFKALEEGLRAAHGDDITPEDVMSAAMYPKVFQE
FKEFTANFGPVDCLSTRLFLDGPKIAEEFEVELERGKILHIKALALGDLNKAGQREVFFE
LNGQLRSVLVKDTVAMKEMKFHPKAQKSVKGQVGAPMPGKVLEVKVKVGSKVEKGQPLCV
LSAMKMETVVNSPLSGTVKAIHVEADASLEGDDLILEIEE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgcagtttgccgtagtccggggcggtcttggcctgctggccgtcaggagggca
tgcctcttctcccgatcgtcccactccgccccacaggcccagtatcgacccatcaagaaa
gtcatggtggccaaccgaggtgaaatagctatcagggtgttcagagcctgcactgaacta
gggattcgcacggtggcggtttactctgagcaggacaccggacagatgcacaggcagaag
gcagatgaggcttacctgattgggaaaggactgccacctgtcgctgcctacctggacatt
gcagacatcattaaagttgccaaggacaacaaagtggatgctatccaccctggctacggt
ttcctctctgagcgcgcagacttcgctcaggcctgtgcagacgcaggagtgatgtttgtt
ggaccgagcccagaaacggtccggaagatgggagacaaggtggaggctcgctctttggcc
atcagtgctggtgtacctgtggtcccagggacagacgcgcccatcgccagtctgcaggag
gcgcaggcattcgcccagacgtatggtttccccatcatcttcaaagctgcgtacggaggc
ggcggtcgaggcatgagggtggtcagagagtatgaggaactggaggagaattaccagcgg
gcgtactctgaggccctgacggcttttgggaacggcgctctgtttgtagaaaagttcatc
gaaaggccaagacacatagaagttcagatccttggtgataaatatggaaatgtcatccat
ctgttcgagcgagactgctccattcagcgcagacaccagaaggtagtggagatcgcaccg
gccttccagctggaccctcacctgagagacagacttcactctgatgctgtcagcctggcc
aaacaggtgggatacgagaacgccggcaccgtggagttcctggtggacaaacacgggaag
cactacttcatcgaagtcaactcccgcctccaagtggagcacacggtcaccgaagaaatc
acagatgttgacctggtgcatgctcagctgcgtatttgtgagggccgcagtctgccagaa
ctcggcctcaagcaagacaagatccgggtgaacggctgtgccatccagtgcagggtgacg
actgaagacccatctagaggcttccagccagacacgggaaggatcgaggtcttcaggagc
ggggaaggtatggggatccgtctggacagcgcttcagccttccagggtgctgtcatctcg
cctcattatgactcgctgctggttaaagtcatcgccagcggaaaagacctgcacaccgcc
tcgtccaaaatgagccgggccctggctgagttcagagtgcggggggtcaagaccaacatc
ccgttcctgcagaacgtcctgtccaacaaccagttcctgcactccaccgtggacacccag
tttattgacgagaatccagaactcttcaacctcaagcccactcagaaccgagctcagaag
ctcctgcactacctcggtcatgtgatggtgaatggaccaaccacgcccatcccagtcaag
gctaagccgtcctccatcgacccagccgtcccttccgtcaccatgggtgacccacctgta
ggctttcgggatgtgctgctgcgtcgcggtcctgagggattcgccaaggctgtgcgagcc
caccagggtctgctgctgatggacacgacgttcagggacgctcaccagtcacttctggcc
accagggttcgcacccatgacctgaagatcatctctccttttgtcagccacaacttcagc
aacctcttcagcctggagaactggggaggtgctacctttgacgtggccatgcgattcttg
tccgaatgtccgtggaaaaggctccaggagctgagagctttgatcccaaatgtcccgttc
cagatgctgctgagaggggccaacgctgtcggctacacaaactaccctgataacgccgtc
ttcaagttctgcgaggtggccaaggagaacggcatggacattttccgtgtgtttgattcc
ctgaactacctgccgaacatgctgctgggcatggaggctgcaggagcggcgggtggcgtc
gttgaggccgccatctcgtacacgggcgacgtctctgacccgatgaggcagaaatactcg
ctggattactacgtgaagctggctgatgagctcgtcaaagctggaacccacattctctcc
gtcaaggacatggccggcctcctgaagcctgaggccagcaagctgctgattggcgccctg
agagaccgattcccagacgtgcccattcacgtgcacacgcacgacacagctggagcagga
gtagcggctatgttggcctgtgccgaggctggagcggatgtagtggatgttgcagttgac
tccatggcggggatgacatctcagcccagtatgggcgccatggtcgcctgcaccaaaggg
accaagtacgacaccggcatcgccctggagaaggtgtttgactacagcgagtactgggaa
gtgacccggggactgtacgctccgtttgactgcaccgccaccatgaaatccggcaacgct
gacgtctacgagaacgagataccaggaggacagtacaccaacctgcacttccaggctcac
agcatggggctgggaaacaagttcaaggaggtgaagaaggcttacaccgaagctaacaaa
ctactgggagacctcattaaggtgactccatcctcaaagatcgtgggtgacctggcccag
ttcatggtgcagaacaacctgacccgcgcagaggtggaggagagggcggacgaactgtcc
ttcccactgtctgtggtggagttcctgcagggatacgttggaattcctcatggaggattc
cctgagccgttcagatccaaggtgctgaagtcccttccacgtatcgagggtcgtcctggg
gcctcgctgcctccaatggacttcaaggctctggaggagggactccgggccgctcacggt
gacgacatcacccctgaggatgtgatgtcagccgccatgtatcccaaagtgttccaggag
ttcaaggaattcactgctaacttcggacccgtggattgtctcagcaccaggctgtttctg
gatggacccaagattgcagaagagtttgaggtggagctggaacgagggaagatcctccac
atcaaggccctggctctgggagacctgaacaaggcgggtcagagagaagtcttctttgag
ctgaacgggcagctcagatcggtgctggtgaaagacaccgtggccatgaaggaaatgaag
ttccatcccaaggcccagaagtccgtcaaggggcaggtgggagctcccatgcccggaaaa
gtcctggaggtgaaggtcaaagttggatctaaggtggagaagggtcagcctctgtgtgtc
ctctcagccatgaagatggagacggtggtcaactccccgctgtccgggaccgttaaagct
atccacgtggaggccgacgcctccctggagggagacgacctgatactggaaatcgaggag
taa
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