Nannospalax galili (Upper Galilee mountains blind mole rat): 103731767
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Entry
103731767 CDS
T03372
Symbol
Trub1
Name
(RefSeq) TruB pseudouridine synthase family member 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngi03016
]
103731767 (Trub1)
Enzymes [BR:
ngi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
103731767 (Trub1)
Transfer RNA biogenesis [BR:
ngi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103731767 (Trub1)
Prokaryotic type
103731767 (Trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
103731767
NCBI-ProteinID:
XP_008828461
UniProt:
A0A8C6RLW9
LinkDB
All DBs
Position
Un
AA seq
348 aa
AA seq
DB search
MAAVEAEIVPALVADSAPVSDPAGAAQTMVAPSVAGAAAAAVAAAARTGSEAKVSKAALA
TKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSSEWSKRKKQTLKIGHGGTLDS
AARGVLVVGIGRGTKMLTSMLSGSKRYVAIGELGKATDTLDSTGRVTEEKPYDKITQEDI
EGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEAVEAKPARLVTVYSISLQKFQPPL
FTLDVECGGGFYIRSLVNDIGKELASCASVLELTRTKQGPFTLEEHALPEDKWTIDDIAQ
SLEHCTSLLPDELALKKSKPDEPSDQVLSCEYITLNETKGENDIVETL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgttgaggcggagatagtgccggctctggttgcggactcggccccagtctct
gaccctgcgggagcagcccagactatggttgcgccctcggtagccggcgctgcagccgct
gctgtggcggccgccgccaggacgggatccgaggccaaggtttccaaggccgcgctggcc
accaagctgctgtcgctcagcggcgtgttcgccgtgcacaagcccaaagggcccacctca
gccgagctgctgaacaggttgaaggagaagctgctggcagaagctggaatgccttcttca
gagtggagcaagaggaaaaagcaaactttgaaaattggacacggagggactctggacagt
gcagctcgcggtgttctggtggttggaattggaagaggaacaaaaatgttgaccagtatg
ttgtcagggtccaagaggtatgttgccattggagagctgggaaaagccactgacactcta
gattctaccggaagagtaacagaagagaagccctacgataaaataacgcaagaagatatt
gaaggcattctacagaaatttactgggaatataatgcaagtacctccactatattctgca
ttaaagaaagatggacagagactttcaactttaatgaagagaggcgaagcagtagaagcc
aaacctgccaggctcgtcactgtgtacagcatctctcttcagaaattccagccaccactt
ttcacattagatgttgaatgtggaggaggtttttatatcagaagcctggtcaatgacatt
ggtaaagagctcgcttcctgtgccagtgtcctggagctgacccgaaccaaacaggggcca
tttacacttgaagaacatgcccttcccgaagacaaatggacgattgatgacattgcacag
tccctagagcactgtacatctcttctgccagatgagttggcacttaaaaaatcaaagcct
gatgaacctagtgaccaggttttgagctgtgaatatataactctaaatgagacaaaggga
gaaaatgacatagtggagaccctttga
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