Nannospalax galili (Upper Galilee mountains blind mole rat): 103742115
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Entry
103742115 CDS
T03372
Symbol
Prdm4
Name
(RefSeq) PR/SET domain 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
103742115 (Prdm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngi03000
]
103742115 (Prdm4)
Transcription factors [BR:
ngi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103742115 (Prdm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf_PR_Knuckle
zf-C2H2
zf-C2H2_4
SET
zf-met
zf-C2H2_jaz
PyrI_C
Mu-like_Com
Astro_capsid_p
Motif
Other DBs
NCBI-GeneID:
103742115
NCBI-ProteinID:
XP_008841334
UniProt:
A0A8C6RI43
LinkDB
All DBs
Position
Un
AA seq
797 aa
AA seq
DB search
MNDMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHSAIPAPGLPVAIPNLGPSLSSL
PSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRPPPQY
IHPNSLNVDGNTALSITNNPSALDPYQSNGNVGLELGIVSIDSRSVNTHGAQSLHPNDGH
EVALDTTITMENVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGSRSHEPLSVDSVSNNL
TADTVGHGGVIPIHGNGLELPVVMETDHIANRVNGMSDSALSDSIHTVAMSTNSVSVALS
TSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVPPSLHMEDSNS
NKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDSPIESRARLSLPKQLVLRQSIVGAE
VGVWTAETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHVWKIYHNSVLEFCIITTDENEC
NWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYAQQIGVPEHPDI
HLCNCGKECNSYSEFKAHLTSHIHNHLPSQSHSSSHGPSHSKERKWKCSMCPQAFISPSK
LHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCALCDKSFTQKAHLESH
MVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKHLNSH
EGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAQEEEEEDDSEEDELTDAMRTDDC
RISSAMYSADESLSARK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacatgaatttgagcccagtggggatggagcagctgacttcatcctctgtgagc
aatgctctgccagtctcaggaagtcacctggggttggctgcctctcccactcacagtgcc
atccctgccccaggtctcccagtggcaattccaaacctgggtccctccctgagctctctg
ccttctgccttgtctctgatgctccccatgggcattggcgatcgaggggtgatgtgtggg
ttacctgaaagaaactacaccctacctccaccaccgtaccctcacctggagagcagttac
ttcagaaccattctacctggcattttatcttatttagctgacagaccacctcctcagtac
atccaccccaactctctaaatgttgatggtaatacagcattatctatcaccaacaatcct
tcagcgctagatccctatcagtccaatggaaatgttggattagaactaggcattgtttca
atagactctcgttctgtgaacacacatggtgcccaaagtcttcatcctaatgatggccat
gaagtggcattggacacaacaattactatggagaatgtttctagggttactagcccaatc
tctacagatggaatggcagaggagcttacgatggatggtgttgcaggtgaacattcccaa
atcccaaatggctccagaagtcatgaacctctctctgtggattccgtgagcaacaacctt
acagcagacactgtgggacatggtggtgtgatacccattcatgggaatggtctggagctt
cctgtggttatggagacagaccacattgcaaatcgggtcaacgggatgtctgacagtgcc
ctcagtgactccatccacaccgtggccatgagcaccaactctgtaagcgtggcactctct
acctcacacaacctcgcctccctagagtctgtttccctccatgaagttggcctcagccta
gaacctgtggctgtctcctccatcacccaggaggttgctatggggacaggtcatgtagat
gtatcttcagacagtctgtcttttgtaccaccttcactgcatatggaagactccaattca
aacaaggaaaacatggcaaccttgtttacaatttggtgtactctttgtgaccgagcctac
ccctcagactgccctgatcatggaccagtgacttttgttcctgactcgccaatagagagc
agagcaagactgtccctcccaaagcagcttgttctccgccagtccattgtgggagcagaa
gttggtgtatggactgcagaaaccattcctgtgcggacttgctttgggcccctgattggc
cagcagagccactccatggaagtagcagagtggacagacaaggcggtaaaccatgtctgg
aagatataccacaacagtgtcctggaattttgcatcattacaactgatgaaaatgaatgt
aattggatgatgtttgtgcgcaaagccaggaaccgggaagaacagaatttggtggcttat
cctcatgatggaaaaatctatttctgcacctcacaagacatccctcctgaaaatgaactg
cttttctattacagccgggattacgctcaacagattggtgttcctgaacacccagacatt
cacctctgtaactgtggcaaggagtgcaattcctattcagagttcaaagctcacctgacc
agccacatccataaccatctccctagtcaaagccacagcagcagccacgggccaagccac
agcaaagaaagaaagtggaagtgttcgatgtgccctcaggcttttatctctccttccaaa
ctccacgtccacttcatgggccatatgggaatgaagcctcacaagtgtgatttctgtagc
aaggcttttagtgatccaagcaacctacggacacaccttaagatacatacaggtcagaag
aactataggtgtgctttgtgtgacaagtcttttacccagaaggctcacctggagtcacac
atggtcatccacacgggtgagaagaatctcaagtgtgattactgtgacaagctatttatg
cggaggcaggacctcaagcagcatgtgctcatccacacgcaagaacgccagatcaagtgt
cccaagtgtgataaactgttcttgagaacaaaccacttgaagaagcacctcaattctcac
gaaggaaaacgagattatgtctgtgaaaaatgtacaaaggcttacctaaccaaatatcat
ctcactcgccacctgaaaacctgcaaaggacccacctccagttcctcagcacaggaagag
gaggaggaggatgactctgaggaggatgagctcacagatgctatgaggacggatgactgc
aggattagcagtgctatgtactcagcagacgagtctctctctgcacgtaaataa
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