Naegleria gruberi: NAEGRDRAFT_62413
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Entry
NAEGRDRAFT_62413 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ngr
Naegleria gruberi
Pathway
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_62413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_62413
Spliceosome [BR:
ngr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
NAEGRDRAFT_62413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
PRP4
NBCH_WD40
ANAPC4_WD40
DUF3549
Glyco_hydro_45
DUF4404
Motif
Other DBs
NCBI-GeneID:
8852300
NCBI-ProteinID:
XP_002682533
JGI:
Naegr1_62413
UniProt:
D2V0T9
LinkDB
All DBs
AA seq
605 aa
AA seq
DB search
MLSDASHLPDEQKIQLILLSPNFNTQFKIPTIDLDVRLKLREMGEPMTLFGEGSSERRER
LKRMIAIQKLRESEDVEQPSSASSASTRSVSEQSVIMADFRKELIQSGRQDLVEQMQDDE
EEATVEEEEEEEDLSKQYFTFQSTNPHLAEVREQIAMHSLQSSHQRLESIREYVEIVKKD
KLGEPTIKQGLAAHLVERKNRFVKNLQQNLSLVSSITGDSRPISQIKFLGHDFGKCISSG
WSGDMKVWQVANPCFKEEDNMIDESEEVSTKPEVMNEDESFSCTQLRSFSNAHDERITCL
QVRNEYVLSSSADRTIKLWNLEAEDTDKPVQIFNGTSENNEDINSREIVTAGNAHTSVIN
RLSIHPSGQQFISTSSDQTWCMWDLSRNELLYSQEGHYSPVYGVDHHPDGGLLCTTDMNG
IVKLWDLRTGLLVANLVHHVKEVLNCSFNPYNGINLVTGGVDGLINVWDLRNISQTIAAK
QTDSNPEQFKQDPVYSIPASGKLMNTIMYEPSCGRSIISSGFDGVVRFWDPISFKPISQS
SVGDRILCMDVVQYPRSCLPSTDEESVYEFGSWSEHLMVVCGGYDKKWRKLTSFSRRALV
NSSNK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctgacgcttctcaccttccagatgaacaaaaaattcaactcatcctcctctca
ccaaattttaatacacaattcaaaatacccaccatcgatttagatgtgaggttaaagttg
agagagatgggagagccaatgaccttgtttggagaaggttcgtccgagagaagagaacgt
ctgaagagaatgatagccattcaaaagcttagagaatcggaagatgtagaacaaccatca
tcagcatcatcagcatcgacgagatcagtctcggaacaatcagttattatggctgatttt
aggaaggaattaatacaaagtggaagacaagatttagtggagcaaatgcaagatgatgaa
gaggaagcaacagtagaggaagaagaagaagaagaggatttatcaaaacaatattttact
ttccaaagtacaaatccacatttggcagaggttcgtgaacaaattgcaatgcactctctg
caatcatcacatcaaagattggagagcattagagaatatgtagaaattgtaaagaaggat
aaattgggagaaccaactattaaacaaggtcttgcagcacatttagtggagagaaagaat
agatttgtaaagaatttacaacaaaatttatcactggtttcttcgattactggtgattct
aggccgatttcacaaatcaaatttctgggacacgattttggaaaatgtatttcatcagga
tggtcaggtgacatgaaagtttggcaggttgccaatccatgtttcaaggaagaagacaat
atgattgacgagagtgaggaagtatcaacaaaaccagaagttatgaatgaagacgaatcc
ttctcctgtactcaattgagaagtttctcaaatgctcatgacgagagaattacatgtcta
caagtgagaaatgagtatgtgttgagttcttctgctgacagaactattaagctttggaat
ttggaagctgaggatactgacaaacctgtacaaatatttaatggaacatcagaaaacaat
gaggatatcaattcgagagaaattgtcactgctggaaatgcacatacatcagtaatcaat
agattgtccattcatccaagtggccaacaattcatcagtacaagttctgaccaaacttgg
tgtatgtgggatttatcgagaaacgaattactctattcacaggaaggtcactattctcca
gtttatggtgtagaccatcatcctgatggaggattattgtgtacaactgatatgaatggt
attgtcaaattatgggatttaagaactggcttgttggtggccaaccttgttcaccatgtc
aaggaggtactcaattgctcattcaatccatacaatggtattaatttggttactggtggt
gtggatggtttgattaacgtttgggatttaagaaatattagtcaaaccattgctgccaaa
caaacagattccaatcctgaacaatttaaacaagatccagtttactctataccagcaagt
ggtaaactgatgaatactatcatgtatgagccatcatgcggtagatcaataatttccagt
ggttttgatggagttgttagattttgggatccaatatctttcaaaccaatttctcaatcc
tctgtgggagatagaattctatgcatggatgtagttcaatatccaagaagttgcctacca
tccactgatgaagaaagtgtgtacgaatttggaagttggagcgagcacttgatggtcgta
tgtggtggctatgataaaaagtggagaaaactaacaagcttctcaaggagagccttagta
aactcttccaataaatag
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