Nitrosococcus halophilus: Nhal_0176
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Entry
Nhal_0176 CDS
T01198
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
nhl
Nitrosococcus halophilus
Pathway
nhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Nhal_0176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhl03400
]
Nhal_0176
Enzymes [BR:
nhl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Nhal_0176
DNA repair and recombination proteins [BR:
nhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Nhal_0176
RecFOR pathway proteins
Nhal_0176
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
Motif
Other DBs
NCBI-ProteinID:
ADE13386
UniProt:
D5C4W3
LinkDB
All DBs
Position
189474..189998
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AA seq
174 aa
AA seq
DB search
MVRILGIDPGSRITGYGLIETNGKEAAYITAGCIQAGNGELAERLGRIFKGITAIIEDYH
PDEVAVEQVFMHQNPGAALKLGHARGAAICAAMNVVLPVFEYTPSQVKQAVVGRGDAAKS
QVQYMIRLLLKLPSEPVTDAADALACALCHGHAGPLLAGLAGQVRGRRRGRYYR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaatccttggtatcgatcccgggtctcgtatcaccggctatgggttgattgaa
accaatggcaaggaggcggcctatatcactgctggctgtattcaggcggggaatggggaa
ctagcggaacggctggggcggatattcaagggaatcaccgcgatcatcgaggactatcat
cctgatgaagtggcagtggagcaagtttttatgcaccaaaatccaggggctgccctgaag
ctagggcatgcccggggcgcggctatctgcgcggctatgaatgtagtcctcccggttttc
gaatatacgccctcccaggtgaaacaggcggtcgtgggccggggtgatgccgccaagtct
caagttcaatatatgatacggttattgcttaaactgccttctgagccggtgacggatgcc
gccgatgctctagcctgcgctctctgccatggtcatgcgggtcccctgttggctggcttg
gctgggcaggtgagaggccggcggcggggacgctattaccgatga
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