Candidatus Nitrosopumilus sediminis: NSED_01180
Help
Entry
NSED_01180 CDS
T02303
Name
(GenBank) methylisocitrate lyase
Organism
nir
Candidatus Nitrosopumilus sediminis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP_mutase
ICL
Pantoate_transf
Motif
Other DBs
NCBI-ProteinID:
AFS82048
UniProt:
K0B7C8
LinkDB
All DBs
Position
complement(198726..199592)
Genome browser
AA seq
288 aa
AA seq
DB search
MNEIMKKLKSMLKSKKPLVIPGVYDALGAKIAQKVGFDAMFQTGYGTSATLFGMPDYGFI
GAAETVDNARRICRSVSVPVIVDSDTGYGNALSVWKLVKELESAGASGIFLEDQKWPKRC
GHMQGKDVVSQEEYTEKLSAAIDARESKEFMIVARTDARATKGLDEAIQRGKQNKKTGAD
AVFVEAPRSIDEMKKIGKEINAPLVANMIEGGATPLSSSEVLSKMGFNIILYPLSVLYAN
TFATMNILQELKNTGNTSKYKQKVVNFDQFNDLVELPKFRKMERKYKN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaattatgaagaaattgaaaagcatgttaaaatcaaaaaaaccacttgttatt
ccaggagtttatgatgcattaggtgcaaaaattgctcaaaaagtaggatttgatgcgatg
tttcaaacaggatatggtacatccgcaacattgtttggaatgccagattatggatttatc
ggagctgctgaaactgtagataatgctagaagaatttgcagatctgtttcagtcccagtt
attgttgattcagatacaggatatggtaatgcactaagcgtatggaaattagtaaaagag
ttagaatcagcaggtgcatcaggcatttttctagaggatcaaaaatggcctaaacgatgt
ggacatatgcaaggaaaagatgttgtatctcaggaagaatatacagaaaaactgtcagct
gctattgatgcaagagaaagtaaagagttcatgattgttgcaagaacagacgcacgcgca
acaaaaggattagatgaagcaattcaacgaggaaaacaaaataagaagacaggtgcagat
gcagtttttgttgaagctccaagatcaatagatgagatgaaaaaaattggtaaggagatc
aatgcaccattagttgcaaacatgattgaaggtggagctacaccgttaagctcttctgaa
gtattaagcaaaatgggattcaatattattttgtatccattgtcagttttgtatgcaaat
acatttgcaacaatgaatattttacaagaattaaagaatacaggaaatacatcaaagtat
aaacaaaaagttgtaaattttgatcagtttaatgacttggttgaacttccaaaatttaga
aagatggaaagaaaatataaaaattag
DBGET
integrated database retrieval system