Niastella koreensis: Niako_5916
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Entry
Niako_5916 CDS
T01679
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
nko
Niastella koreensis
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nko01002
]
Niako_5916
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nko01011
]
Niako_5916
Peptidases and inhibitors [BR:
nko01002
]
Cysteine peptidases
Family C82
Niako_5916
Peptidoglycan biosynthesis and degradation proteins [BR:
nko01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Niako_5916
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AEW02146
UniProt:
G8TQD2
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Position
7357740..7359395
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AA seq
551 aa
AA seq
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MNPFFIVYYPIRVAFMQKSIVLFALSLLCIWGCRDSGSKSGDNRKKDSISKVVQDAARDI
AGNFSEQSSMRFSANRLASFFARYDSLRSFQKDINTFYTGRNYSFAWFTDSGLTEQASHL
YVRLENLPEEGLSVSLPYKRTLDTLINAGNTQTLEQKSETELLLTGLYFFFAQKVWGGLE
ESATQKVDWLMPRKKLSYSAFLDSVLKQGNTGTVKEPVYRQYNLLKEYLKKYKALPADNI
TVSLPGNKPIRPGDNSPEIIKLRKKLFLLGDLNNASDTTSPTYDSTLLKAVKRFQRRHGM
TEDGIAGGGMVRELNIPVPQLIEKIMVNMERNRWLPTDVRGRYLAVNIPEFVLHAYYDDS
LLWNMNVVVGKDVNKTVIFAGTISQVVFSPYWNVPPSILKKEILPGIQKNPNYLEKNHME
WNGPDVRQKPGPWNSLGQVKFLFPNSHSIYLHDTPSKGLFQESKRAFSHGCIRVANPKFL
ATYMLRDDSTWTADRIAKAMASGKEQFVGVKNPMPVFITYFTAWVDRQGDLNFREDIYKR
DAQLSGLLLKR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctttttttattgtgtattaccccattagagtagcctttatgcaaaaatctatt
gttctctttgcccttagcctgttgtgtatttggggatgcagggattccggttccaaatca
ggagataaccgtaaaaaggattccatcagtaaagtggtacaggatgccgcccgggacatt
gccggtaacttcagcgagcaaagctccatgcgcttttctgccaaccgcctcgcttcattt
tttgccaggtacgattccctgcgcagctttcagaaagacatcaatacattttataccggc
cgcaattattcctttgcctggtttaccgacagtggattgaccgaacaggccagccacctg
tatgtgcgtttggaaaacctgcccgaagaaggattgagcgtgtcactgccttataagcgc
accctcgatacccttataaacgctggtaacacccaaacccttgaacaaaaaagcgagact
gaactgcttttaaccggcctttactttttctttgcccaaaaagtgtggggtggcctggaa
gaaagcgctacccaaaaggtagactggctgatgccccgcaaaaaattatcgtacagcgcc
tttcttgactcggtactgaagcagggtaacaccggcaccgttaaagaaccggtttaccgc
caatacaacctgttaaaagaatacctcaaaaaatataaagccctgccggcagataatatt
actgttagcctgcccgggaacaaacccattcgccccggcgataattcgccagagatcatt
aagctgcgcaaaaagcttttcctcctcggcgatttaaacaatgccagcgacaccacttcc
cccacttacgactccaccctgttgaaagccgttaaacgctttcagagacgacatgggatg
acggaggatggcattgccggtgggggtatggttagggaactgaatatacctgtgccacag
ctgattgaaaaaataatggtgaacatggagcgcaaccgctggttacctaccgatgttcgt
ggccggtacctggctgtaaacattcccgagtttgtgctgcatgcctattatgatgattcc
ctcctgtggaatatgaacgtagtagtgggtaaggatgtaaacaaaacggtgatctttgcc
ggcaccatcagccaggtggtgttcagtccttactggaatgtgccgcccagtattttgaaa
aaagaaatcctgcccggtattcaaaagaaccccaactacctggaaaaaaatcacatggaa
tggaatggccccgatgttcgccaaaagcccggtccctggaactcgctgggtcaggtgaag
tttttgttccccaacagccatagcatttacctgcacgatacgccttccaaaggtcttttc
caggagagcaaacgcgccttcagtcatggctgtatccgcgtagccaatccaaagttcctg
gccacctatatgttgcgtgatgattcaacctggacggcagaccggatcgccaaagcaatg
gccagcggtaaggaacaatttgttggagttaaaaaccccatgccggtttttataacttat
ttcaccgcctgggttgacaggcagggcgacctgaacttcagggaagatatttacaaaaga
gacgcccagctttcaggcctgctattgaagcgttaa
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