KEGG   Nomascus leucogenys (northern white-cheeked gibbon): 100582855
Entry
100582855         CDS       T03265                                 
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
  KO
K11653  AT-rich interactive domain-containing protein 1
Organism
nle  Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03082  ATP-dependent chromatin remodeling
nle04714  Thermogenesis
nle05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:nle00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100582855 (ARID1A)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    100582855 (ARID1A)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    100582855 (ARID1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nle03000]
    100582855 (ARID1A)
   03021 Transcription machinery [BR:nle03021]
    100582855 (ARID1A)
   03036 Chromosome and associated proteins [BR:nle03036]
    100582855 (ARID1A)
Transcription factors [BR:nle03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    100582855 (ARID1A)
Transcription machinery [BR:nle03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     100582855 (ARID1A)
Chromosome and associated proteins [BR:nle03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    100582855 (ARID1A)
SSDB
Motif
Pfam: BAF250_C ARID
Other DBs
NCBI-GeneID: 100582855
NCBI-ProteinID: XP_030661526
Ensembl: ENSNLEG00000009343
LinkDB
Position
24:26554540..26641241
AA seq 2284 aa
MAAQVAPAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEG
PAVGPPQPLGKELQDGAESNGGGGGGGAGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGG
GGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLAA
LQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGA
AAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPS
SARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRSHHAPM
SPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPY
GSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQ
PPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQ
QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQE
LSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVS
TSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGN
QMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIH
TGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMH
GQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMH
VTANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMA
ASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKM
WVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV
GTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQ
GPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKR
NSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSR
AAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPS
RYPPQQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPA
KRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATA
ATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQGR
NDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPV
PPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVP
ASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLL
AESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQ
RTLLDPGRFSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVVENDEEIAFSGKDKPASENS
EEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFES
KTELLPSRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRSST
LTEDGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRC
VCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGV
SCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQD
PFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNP
VCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNP
PFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFL
IGQS
NT seq 6855 nt   +upstreamnt  +downstreamnt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccg
ccctcggagctgaagaaagccgagcagcagcagcgggaggaggcggggggcgaggcggcg
gcggcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggc
cccgccgtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaat
gggggtggcggcggcggcggagccggcgggcccggcgcggagccggacctgaagaactcg
aacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgcccggcggc
ggcggtggcggcagcagcgatggggtgggggcgcctcctcactcagccgcggccgccttg
ccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtcgctgcc
gccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctggcagcg
ctgcagagcggcggcggcgggggcctggagccctacgcggggccccagcagaactctcac
gaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagcgcctacccc
ccgcccgccccggcctacgcgctgagctccccgagaggtggcactccgggctccggcgcg
gcggcggctgccggctccaagccgcctccctcctccagcgcctccgcctcctcgtcgtct
tcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctccgcggccggc
gggggaactccccagcccaccgccacccccaccctcaaccaactgctcacgtcgcccagc
tcggcccggggctaccagggctaccccgggggcgactacggtggcgggccccaggacggg
ggcgccggcaagggcccggcggacatggcctcgcagtgttggggggctgcggcggcggca
gcggcggcggcggcggccgcctcgggaggggcccaacaaaggagccaccacgcgcccatg
agccccgggagcagcggcggcggggggcagccgctcgcccggacccctcagccatccagt
ccaatggatcagatgggcaagatgagacctcagccatatggcgggactaacccatactcg
caacagcagggacctccgtcaggaccgcagcaaggacatgggtacccagggcagccatat
gggtcccagaccccgcagcggtacccgatgaccatgcagggccgggcgcagagtgccatg
ggcggcctctcttatacacagcagattcctccttatggacaacaaggccccagcgggtat
ggtcaacagggccagactccatattacaaccagcaaagtcctcaccctcagcagcagcag
ccaccctactcccagcaaccaccgtcccagacccctcatgcccaaccttcgtatcagcag
cagccacagtctcaaccaccacagctccagtcctctcagcctccatactcccagcagcca
tcccagcctccacatcagcagtccccggctccatacccctcccagcagtccacgacacag
cagcacccccagagccagcccccctattcacagccacaggctcagtctccttaccagcag
cagcaacctcagcagccagcaccctcgacgctctcccagcaggctgcatatcctcagccc
cagtctcagcagtcccagcaaactgcctattcccagcagcgcttccctccgccgcaggag
ctatctcaagattcatttgggtctcaggcatcctcagccccctcaatgacctccagtaag
ggagggcaagaagatatgaacctgagccttcagtcaagaccctccagcttgcctgatcta
tctggttcaatagatgacctccctatggggacagaaggagctctgagtcctggagtgagc
acatcagggatttccagcagccaaggagagcagagtaatccagctcagtctcctttctct
cctcatacctcccctcacctgcctggcatccgaggcccttccccttcccctgttggctct
cccgccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgccaggcaac
cagatgccacctcggccacccagtggccagtcggacagcatcatgcatccttccatgaac
caatcaagcattgcccaagatcgaggttatatgcagaggaacccccagatgccccagtac
agttccccccagcctggctcagccttatctccgcgtcagccttccggaggacagatacac
acaggcatgggctcctaccagcagaactccatggggagctatggtccccaggggggtcag
tatggcccacaaggtggctaccccaggcagccaaactataatgccttgcccaatgccaac
taccccagtgcaggcatggctggaggcataaaccccatgggtgccggaggtcaaatgcat
ggacagcctggcatcccaccttatggcacacttcctccagggaggatgagtcatgcctcc
atgggcaaccggccttatggccctaacatggccaatatgccacctcaggttgggtcaggg
atgtgtcccccaccagggggcatgaaccggaaaacccaagaaactgctgtcgccatgcat
gttactgccaactctatccaaaacaggccgccaggctaccccaatatgaatcaagggggc
atgatgggaactggacctccttatggacaagggattaatagtatggctggcatgatcaac
cctcagggacccccatattccatgggtggaaccatggccaacaattctgcagggatggca
gccagcccagagatgatgggccttggggatgtcaagttaactccagccaccaaaatgaac
aacaaggcagatgggacacccaagacagaatccaaatccaagaaatccagttcttctact
acaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagaggaagatg
tgggtggaccgttatctggccttcactgaggagaaggccatgggcatgacaaatctgcct
gctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggagattggt
ggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcaaccaacctgaatgtg
ggcacatcaagcagtgctgccagctccttgaaaaagcagtatatccagtgtctctatgcc
tttgaatgcaagattgaacggggagaagaccctcccccagacatctttgcagctgctgat
tccaagaagtcccagcccaagatccagcctccctctcctgcgggatcaggatctatgcag
gggccccagactccccagtcaaccagcagttccatggcagaaggaggagacttaaagcca
ccaactccagcatccacaccacacagtcagatccccccattgccaggcatgagcaggagc
aattcagttgggatccaggatgcctttaatgatggaagtgactccacattccagaagcgg
aattccatgactccaaaccctgggtatcagcccagtatgaatacctctgacatgatgggg
cgcatgtcctatgagccaaataaggatccttatggcagcatgaggaaagctccagggagt
gatcccttcatgtcctcagggcagggccccaacggcgggatgggtgacccctacagtcgt
gctgccggccctgggctagggaatgtggcgatgggaccacgacagcactatccctatgga
ggtccttatgacagagtgaggacggagcctggaatagggcctgagggaaacatgagcact
ggggccccacagccgaatctcatgccttccaacccagactcggggatgtattctcccagc
cgctaccccccgcagcagcagcagcagcagcagcagcaacgacatgattcctatggcaat
cagttctccacccaaggcaccccttctggcagccccttccccagccagcagaccacaatg
tatcaacagcagcagcagaattacaagcggccaatggatggcacatatggccctcctgcc
aagcggcacgaaggggagatgtacagcgtgccatacagcactgggcaggggcagcctcag
cagcagcagttgcccccagcccagccccagcctgccagccagcaacaagctgcccagcct
tcccctcagcaagatgtatacaaccagtatggcaatgcctatcctgccactgccaccgct
gctactgagcgccgaccagcaggcggcccccagaaccaatttccattccagtttggccga
gaccgtgtctctgcaccccctggcaccaatgcccagcaaaacatgccaccgcaaatgatg
ggcggccccatacaggcatcagctgaggttgctcagcaaggcaccatgtggcaggggcgt
aatgacatgacctataattatgccaacaggcagagcacaggctctgccccccagggcccc
gcctatcatggcgtgaaccgaacagatgaaatgctgcacacagatcagagggccaaccac
gaaggcccgtggccttcccatggcacacgccagcccccatatggtccctctgcccctgtg
ccccccatgacaaggccccctccgtctaactaccagcccccgccaagcatgcagaatcac
attcctcaggtatccagccctgctcccctgccccggccaatggagaaccgcacctctcct
agcaagtctccattcctgcactctgggatgaaaatgcagaaggcaggtcccccagtacct
gcctcgcacatagcacctgcccctgtgcagccccccatgattcggcgggatatcaccttc
ccacctggctctgttgaagccacacagcctgtgttgaagcagaggaggcggctcacaatg
aaagacattggaaccccggaggcatggcgggtaatgatgtccctcaagtctggtctcctg
gcagagagcacatgggcattagataccatcaacatcctgctatatgatgacaacagcatc
atgaccttcaacctcagtcagctcccagggttgctagagctccttgtagaatatttccga
cgatgcctgattgagatctttggcattttaaaggagtatgaggtgggtgacccaggacag
agaacgctactggatcctgggaggttcagcaaggtgtctagtccagctcccatggagggt
ggggaagaagaagaagaacttctaggtcctaaactagaagaggaagaagaagaggaagta
gttgaaaatgatgaggagatagccttttcaggcaaggacaagccagcttcagagaatagt
gaggagaagctgatcagtaagtttgacaagcttccagtaaagatcgtacagaagaatgac
ccatttgtggtggactgctcagataagcttgggcgtgtgcaggagtttgacagtggcctg
ctgcactggcggattggtgggggggacaccactgagcatatccagacccacttcgagagc
aagacagagctgctgccttcccggcctcatgcaccctgcccaccagcccctcggaagcat
gtgacaacggcagagggtacgccagggacaacagaccaggaggggcccccgcctgatgga
cctccagaaaaacggatcacagccactatggatgacatgttgtctactcggtctagcacc
ttgaccgaggatggagctaagagttcagaggccatcaaggagagcagcaagtttccattt
ggcattagcccagcacagagccaccggaacatcaagatcctagaggacgaaccccacagt
aaggatgagaccccactgtgtacccttctggactggcaggattctcttgccaagcgctgc
gtctgtgtctccaataccattcgaagcctgtcatttgtgccaggcaatgactttgagatg
tccaaacacccagggctgctgctcatcctgggcaagctgatcctgctgcaccacaagcac
ccagaacggaagcaggcaccactaacttatgaaaaggaggaggaacaggaccaaggggtg
agctgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaataccttg
gttacactcgccaacatctcggggcagttggacctatccccataccccgagagcatttgc
ctgcctgtcctggacggactcctacactgggcagtttgcccttcagctgaagcccaggac
cccttttccaccctgggccccaatgccgtcctttccccgcagagactggtcttggaaacc
ctcagcaaactcagcatccaggacaacaatgtggacctgattctggccacaccccccttc
agccgcctggagaagttgtatagcactatggtgcgcttcctcagtgaccgaaagaacccg
gtgtgccgggagatggctgtggtactgctggccaacctggctcagggggacagcctggca
gctcgtgccattgcagtgcagaagggcagtatcggcaacctcctgggcttcctagaggac
agccttgccgccacgcagttccagcagagccaggcgagcctcctccacatgcagaaccca
ccctttgagccaactagtgtggacatgatgcggcgggctgcccgcgcgctgcttgccctg
gccaaggtggacgagaaccactcagagtttactctgtacgaatcacggctgttggacatc
tcggtatcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactgtttttg
attggccagtcatga

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