Nomascus leucogenys (northern white-cheeked gibbon): 100582855
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Entry
100582855 CDS
T03265
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03082
ATP-dependent chromatin remodeling
nle04714
Thermogenesis
nle05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100582855 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100582855 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100582855 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nle03000
]
100582855 (ARID1A)
03021 Transcription machinery [BR:
nle03021
]
100582855 (ARID1A)
03036 Chromosome and associated proteins [BR:
nle03036
]
100582855 (ARID1A)
Transcription factors [BR:
nle03000
]
Eukaryotic type
Helix-turn-helix
ARID
100582855 (ARID1A)
Transcription machinery [BR:
nle03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100582855 (ARID1A)
Chromosome and associated proteins [BR:
nle03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100582855 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
100582855
NCBI-ProteinID:
XP_030661526
Ensembl:
ENSNLEG00000009343
LinkDB
All DBs
Position
24:26554540..26641241
Genome browser
AA seq
2284 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEG
PAVGPPQPLGKELQDGAESNGGGGGGGAGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGG
GGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLAA
LQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGA
AAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPS
SARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRSHHAPM
SPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPY
GSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQ
PPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQ
QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQE
LSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVS
TSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGN
QMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIH
TGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMH
GQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMH
VTANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMA
ASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKM
WVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV
GTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQ
GPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKR
NSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSR
AAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPS
RYPPQQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPA
KRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATA
ATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQGR
NDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPV
PPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVP
ASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLL
AESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQ
RTLLDPGRFSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVVENDEEIAFSGKDKPASENS
EEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFES
KTELLPSRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRSST
LTEDGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRC
VCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGV
SCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQD
PFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNP
VCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNP
PFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFL
IGQS
NT seq
6855 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccg
ccctcggagctgaagaaagccgagcagcagcagcgggaggaggcggggggcgaggcggcg
gcggcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggc
cccgccgtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaat
gggggtggcggcggcggcggagccggcgggcccggcgcggagccggacctgaagaactcg
aacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgcccggcggc
ggcggtggcggcagcagcgatggggtgggggcgcctcctcactcagccgcggccgccttg
ccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtcgctgcc
gccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctggcagcg
ctgcagagcggcggcggcgggggcctggagccctacgcggggccccagcagaactctcac
gaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagcgcctacccc
ccgcccgccccggcctacgcgctgagctccccgagaggtggcactccgggctccggcgcg
gcggcggctgccggctccaagccgcctccctcctccagcgcctccgcctcctcgtcgtct
tcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctccgcggccggc
gggggaactccccagcccaccgccacccccaccctcaaccaactgctcacgtcgcccagc
tcggcccggggctaccagggctaccccgggggcgactacggtggcgggccccaggacggg
ggcgccggcaagggcccggcggacatggcctcgcagtgttggggggctgcggcggcggca
gcggcggcggcggcggccgcctcgggaggggcccaacaaaggagccaccacgcgcccatg
agccccgggagcagcggcggcggggggcagccgctcgcccggacccctcagccatccagt
ccaatggatcagatgggcaagatgagacctcagccatatggcgggactaacccatactcg
caacagcagggacctccgtcaggaccgcagcaaggacatgggtacccagggcagccatat
gggtcccagaccccgcagcggtacccgatgaccatgcagggccgggcgcagagtgccatg
ggcggcctctcttatacacagcagattcctccttatggacaacaaggccccagcgggtat
ggtcaacagggccagactccatattacaaccagcaaagtcctcaccctcagcagcagcag
ccaccctactcccagcaaccaccgtcccagacccctcatgcccaaccttcgtatcagcag
cagccacagtctcaaccaccacagctccagtcctctcagcctccatactcccagcagcca
tcccagcctccacatcagcagtccccggctccatacccctcccagcagtccacgacacag
cagcacccccagagccagcccccctattcacagccacaggctcagtctccttaccagcag
cagcaacctcagcagccagcaccctcgacgctctcccagcaggctgcatatcctcagccc
cagtctcagcagtcccagcaaactgcctattcccagcagcgcttccctccgccgcaggag
ctatctcaagattcatttgggtctcaggcatcctcagccccctcaatgacctccagtaag
ggagggcaagaagatatgaacctgagccttcagtcaagaccctccagcttgcctgatcta
tctggttcaatagatgacctccctatggggacagaaggagctctgagtcctggagtgagc
acatcagggatttccagcagccaaggagagcagagtaatccagctcagtctcctttctct
cctcatacctcccctcacctgcctggcatccgaggcccttccccttcccctgttggctct
cccgccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgccaggcaac
cagatgccacctcggccacccagtggccagtcggacagcatcatgcatccttccatgaac
caatcaagcattgcccaagatcgaggttatatgcagaggaacccccagatgccccagtac
agttccccccagcctggctcagccttatctccgcgtcagccttccggaggacagatacac
acaggcatgggctcctaccagcagaactccatggggagctatggtccccaggggggtcag
tatggcccacaaggtggctaccccaggcagccaaactataatgccttgcccaatgccaac
taccccagtgcaggcatggctggaggcataaaccccatgggtgccggaggtcaaatgcat
ggacagcctggcatcccaccttatggcacacttcctccagggaggatgagtcatgcctcc
atgggcaaccggccttatggccctaacatggccaatatgccacctcaggttgggtcaggg
atgtgtcccccaccagggggcatgaaccggaaaacccaagaaactgctgtcgccatgcat
gttactgccaactctatccaaaacaggccgccaggctaccccaatatgaatcaagggggc
atgatgggaactggacctccttatggacaagggattaatagtatggctggcatgatcaac
cctcagggacccccatattccatgggtggaaccatggccaacaattctgcagggatggca
gccagcccagagatgatgggccttggggatgtcaagttaactccagccaccaaaatgaac
aacaaggcagatgggacacccaagacagaatccaaatccaagaaatccagttcttctact
acaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagaggaagatg
tgggtggaccgttatctggccttcactgaggagaaggccatgggcatgacaaatctgcct
gctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggagattggt
ggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcaaccaacctgaatgtg
ggcacatcaagcagtgctgccagctccttgaaaaagcagtatatccagtgtctctatgcc
tttgaatgcaagattgaacggggagaagaccctcccccagacatctttgcagctgctgat
tccaagaagtcccagcccaagatccagcctccctctcctgcgggatcaggatctatgcag
gggccccagactccccagtcaaccagcagttccatggcagaaggaggagacttaaagcca
ccaactccagcatccacaccacacagtcagatccccccattgccaggcatgagcaggagc
aattcagttgggatccaggatgcctttaatgatggaagtgactccacattccagaagcgg
aattccatgactccaaaccctgggtatcagcccagtatgaatacctctgacatgatgggg
cgcatgtcctatgagccaaataaggatccttatggcagcatgaggaaagctccagggagt
gatcccttcatgtcctcagggcagggccccaacggcgggatgggtgacccctacagtcgt
gctgccggccctgggctagggaatgtggcgatgggaccacgacagcactatccctatgga
ggtccttatgacagagtgaggacggagcctggaatagggcctgagggaaacatgagcact
ggggccccacagccgaatctcatgccttccaacccagactcggggatgtattctcccagc
cgctaccccccgcagcagcagcagcagcagcagcagcaacgacatgattcctatggcaat
cagttctccacccaaggcaccccttctggcagccccttccccagccagcagaccacaatg
tatcaacagcagcagcagaattacaagcggccaatggatggcacatatggccctcctgcc
aagcggcacgaaggggagatgtacagcgtgccatacagcactgggcaggggcagcctcag
cagcagcagttgcccccagcccagccccagcctgccagccagcaacaagctgcccagcct
tcccctcagcaagatgtatacaaccagtatggcaatgcctatcctgccactgccaccgct
gctactgagcgccgaccagcaggcggcccccagaaccaatttccattccagtttggccga
gaccgtgtctctgcaccccctggcaccaatgcccagcaaaacatgccaccgcaaatgatg
ggcggccccatacaggcatcagctgaggttgctcagcaaggcaccatgtggcaggggcgt
aatgacatgacctataattatgccaacaggcagagcacaggctctgccccccagggcccc
gcctatcatggcgtgaaccgaacagatgaaatgctgcacacagatcagagggccaaccac
gaaggcccgtggccttcccatggcacacgccagcccccatatggtccctctgcccctgtg
ccccccatgacaaggccccctccgtctaactaccagcccccgccaagcatgcagaatcac
attcctcaggtatccagccctgctcccctgccccggccaatggagaaccgcacctctcct
agcaagtctccattcctgcactctgggatgaaaatgcagaaggcaggtcccccagtacct
gcctcgcacatagcacctgcccctgtgcagccccccatgattcggcgggatatcaccttc
ccacctggctctgttgaagccacacagcctgtgttgaagcagaggaggcggctcacaatg
aaagacattggaaccccggaggcatggcgggtaatgatgtccctcaagtctggtctcctg
gcagagagcacatgggcattagataccatcaacatcctgctatatgatgacaacagcatc
atgaccttcaacctcagtcagctcccagggttgctagagctccttgtagaatatttccga
cgatgcctgattgagatctttggcattttaaaggagtatgaggtgggtgacccaggacag
agaacgctactggatcctgggaggttcagcaaggtgtctagtccagctcccatggagggt
ggggaagaagaagaagaacttctaggtcctaaactagaagaggaagaagaagaggaagta
gttgaaaatgatgaggagatagccttttcaggcaaggacaagccagcttcagagaatagt
gaggagaagctgatcagtaagtttgacaagcttccagtaaagatcgtacagaagaatgac
ccatttgtggtggactgctcagataagcttgggcgtgtgcaggagtttgacagtggcctg
ctgcactggcggattggtgggggggacaccactgagcatatccagacccacttcgagagc
aagacagagctgctgccttcccggcctcatgcaccctgcccaccagcccctcggaagcat
gtgacaacggcagagggtacgccagggacaacagaccaggaggggcccccgcctgatgga
cctccagaaaaacggatcacagccactatggatgacatgttgtctactcggtctagcacc
ttgaccgaggatggagctaagagttcagaggccatcaaggagagcagcaagtttccattt
ggcattagcccagcacagagccaccggaacatcaagatcctagaggacgaaccccacagt
aaggatgagaccccactgtgtacccttctggactggcaggattctcttgccaagcgctgc
gtctgtgtctccaataccattcgaagcctgtcatttgtgccaggcaatgactttgagatg
tccaaacacccagggctgctgctcatcctgggcaagctgatcctgctgcaccacaagcac
ccagaacggaagcaggcaccactaacttatgaaaaggaggaggaacaggaccaaggggtg
agctgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaataccttg
gttacactcgccaacatctcggggcagttggacctatccccataccccgagagcatttgc
ctgcctgtcctggacggactcctacactgggcagtttgcccttcagctgaagcccaggac
cccttttccaccctgggccccaatgccgtcctttccccgcagagactggtcttggaaacc
ctcagcaaactcagcatccaggacaacaatgtggacctgattctggccacaccccccttc
agccgcctggagaagttgtatagcactatggtgcgcttcctcagtgaccgaaagaacccg
gtgtgccgggagatggctgtggtactgctggccaacctggctcagggggacagcctggca
gctcgtgccattgcagtgcagaagggcagtatcggcaacctcctgggcttcctagaggac
agccttgccgccacgcagttccagcagagccaggcgagcctcctccacatgcagaaccca
ccctttgagccaactagtgtggacatgatgcggcgggctgcccgcgcgctgcttgccctg
gccaaggtggacgagaaccactcagagtttactctgtacgaatcacggctgttggacatc
tcggtatcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactgtttttg
attggccagtcatga
DBGET
integrated database retrieval system