Nakamurella multipartita: Namu_0507
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Entry
Namu_0507 CDS
T00991
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent helicase HrpA [EC:
5.6.2.6
]
Organism
nml
Nakamurella multipartita
Brite
KEGG Orthology (KO) [BR:
nml00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Namu_0507
Enzymes [BR:
nml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Namu_0507
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
DEAD
AAA_19
nSTAND3
T2SSE
NACHT
AAA_16
ABC_tran
RsgA_GTPase
FtsK_SpoIIIE
DUF3734
Motif
Other DBs
NCBI-ProteinID:
ACV76926
UniProt:
C8X757
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All DBs
Position
562148..566197
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AA seq
1349 aa
AA seq
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MSVHQAPDAERTERLADLTIVDRRRLQGRLRSAERIPDPAKRDLVLAEIDHQLEAGAARL
ARRQAAVPTITFPAQLPVSARVQDLARTIAEHQVVIVAGETGSGKSTQLPKLCLQLGRGV
RGMIGHTQPRRIAARALAERIAEETGTQLGGAIGYSIRFGDHTGPTTLVKLMTDGILLTE
IARDRMLWAYDTIIIDEAHERSLNIDFLLGYLQGLLPQRPDLKLIITSATIDPGKFSRHF
ADAPVVEVSGRTFPVEIRYRPYGLDALPEVDDPDAEQSRGSSESADQGQAITAAVDELLA
AGDGDILVFLSGEREITDTTEVLRGHLAGRRGLTEVLPLYGRLSSADQHKVFSAHPGRRI
VLSTNVAETSLTVPGIRYVIDPGTARISRYSPRSKVQRLPIEPISQASAGQRAGRCGRVA
NGICIRLYSEKDFDERPAYTDPEIARTSLASVILQMAALELGDIVDFPFLDPPDQRQITD
GVTVLTELGAIDRSAGDRVRLTPTGREMADLPLDPRLARMLVEGERRNVRREMLVLVSAL
AVIDVREYPLDERDKATAAHARFVDGNSDFNALISLWAYLEEQAKTQSGNAFRRMCRREY
LNYLRIREWQDLHAQLSQLLDGGRRRGGRRRPDRPAPADRGSLPQRRDPDATQGGRGSLA
VDVDTERVHTALLAGLLSHIGLRKEGTREYQGTRGISYSIWPGSALARTGPVLVVAAELV
ETSRLWARICARVEPGWVEQVGADLLRRNYSEPRWNGKRASVEATEKVTLLGVTLIAART
VQFDRIDPELSRELFIRHALVERDWQTRHRFFADNQRALEQVTEWEERARRRDILIDDDT
MFALYDARIPPQVTSGRHFDSWWKKASRTQPDLLTLTPDMLIAAGAERFDSAAFPDRFTS
GEVELPLDYVFDPGRADDGVTVSIPLPVLARVDPAGFEAQIPGLRADLAVALIRTLPKTL
RRNFVPAPDFARAALDRIDAARPLAEELAGALTRMTGVVVRTADFDPDKVPEHLRMNFRI
VDEHGATVASGRDLPTLQSTLRTDTQRAVVQATKSLERHGLTAFPEPGVPRRVRARVAGH
EVTGYPALVVEGPGTVGVAVFDSEADQRRAMRAGTIELLAAALTPSLTRVRQLLTREQQI
TLATAPGTTIPTLVADATRAAVDALLDWAGGPSWSAAGFAAVRTKLTPSMLTSVRDVLAA
AETVLSAAGAAARALDTAERGPGAAAVADLTRDMRAQWRAAVAPGFIVATGAAGLPDRAR
QLQALRIRAERVREAAGRDRERLAEIRELQAEVDRAVEELPEERRSDPDVQALHHLLAEY
RVALFAQPMRTSVPVSAKRIRSAAAALGG
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcatcaggccccggacgccgaacggaccgaacggctggccgacctgaccatc
gtcgaccggcgtcggctgcaggggcggctgcgcagtgccgaacggatcccggacccggcc
aaacgcgacctggtgctggccgagatcgatcaccagctcgaggccggggcagcccggctg
gcccggcgtcaggccgcggtccccacgatcaccttcccggcccagctgccggtctcggcc
cgggtgcaggacctggcccgcaccatcgccgagcaccaggtggtgatcgtggccggggag
accgggtcgggcaagtcgacccagttgcccaagttgtgtctgcagctggggcggggggtc
cgcggcatgatcgggcacacccagccccggcggatcgccgcccgggcgctggccgaacgg
atcgccgaggagaccggcacccagctgggcggcgcgatcggctactcgatccggttcggc
gaccacaccggcccgaccaccctggtcaagctgatgaccgacggcatcctgctcaccgag
atcgcccgggaccggatgctgtgggcctacgacacgatcatcatcgacgaggcccacgag
cgaagcctgaacatcgacttcctgctgggctacctgcagggcctgctgccgcagcgtccc
gatctcaagttgatcatcacctcggccaccatcgatcccggcaagttctcccgccacttc
gccgacgcccccgtcgtcgaggtctccgggcggaccttcccggtcgagatccgttaccgg
ccctacggtctggacgcgctgccggaggtggacgatccggacgccgagcagtcccgcggt
tcctccgaatcggccgaccagggtcaggcgatcaccgccgcggtcgacgagctgctggcc
gccggggacggcgacatcctggtcttcctgtccggcgagcgggagatcaccgacaccacc
gaggtgttgcgcggccacctggccggccggcggggcctgaccgaggtgctcccgctgtac
gggcggctgtcctcggccgatcagcacaaggtcttctccgcgcaccccggacggcggatc
gtgctgtccaccaacgtggccgaaacctcgctgaccgtccccgggatccggtacgtgatc
gaccccggcaccgcccggatctcgcggtactcgccgcgcagcaaggtgcagcggctgccg
atcgagccgatctcgcaggcctcggccggtcagcgggccggccgctgcggccgggtggcc
aacggcatctgcatccggctgtactcggagaaggacttcgacgagcggcccgcctacacc
gacccggagatcgcccgcacctcgctggcctcggtcatcctgcagatggccgccctggaa
ctcggcgacatcgtcgacttcccgttcctggacccgcccgaccagcggcagatcaccgac
ggcgtcaccgtgctcaccgagctgggggcgatcgaccgcagcgccggcgaccgggtccgg
ctgaccccgaccggccgggagatggccgacctgccgctggatccccggctggcccggatg
ctggtggagggcgagcggcgcaacgtccggcgggagatgctcgtgctggtctccgcgctg
gccgtcatcgacgtccgcgagtacccgctggacgagcgggacaaggcgaccgccgcgcac
gcccgtttcgtcgacggcaactcggacttcaacgccctgatcagcctctgggcgtacctg
gaggagcaggcgaaaactcagtccggcaacgcctttcgccggatgtgccgccgcgagtac
ctgaactacctgcgcatccgggaatggcaggacctgcacgcccagctcagccaactgctc
gacggcgggcgccgtcgcggtggccggcgccggccggatcggcccgccccggccgaccgg
ggcagcctgccccagcgacgcgatccggacgccactcagggtggccgcggctcgctggcc
gtggacgttgacaccgagcgggtgcacaccgccctgctggccgggctgctctcgcacatc
gggctgcgcaaggagggcacccgcgaataccagggcacccgcggcatctcctactcgatc
tggcccggctcggcgctggcccgcaccggcccggtcctggtggtggccgccgaactggtc
gagaccagccggttgtgggcgcggatctgcgcccgggtcgaacccggctgggtcgagcag
gtcggcgcggacctgttgcgccgcaactactccgaaccgcggtggaacggcaagcgggcc
agcgtggaggccaccgagaaggtgaccctgctcggcgtcaccctaatcgccgcccgcacg
gtgcagttcgaccggatcgacccggaactgtcccgggaactgttcatccgccatgccctg
gtcgagcgggactggcagacccggcaccggttcttcgccgacaaccaacgggccctggaa
caggtcaccgagtgggaggaacgggcccggcggcgggacatcctgatcgacgacgacacc
atgttcgccctctacgacgcgcggatcccgccgcaggtcacctcgggccggcacttcgac
tcctggtggaagaaggcctcccgcacccagcccgacctgctcacgctcaccccggacatg
ctgatcgcggccggcgccgagcggttcgactcggccgcgttccccgaccggttcacctcc
ggcgaggtggagctgccgctggactacgtgttcgaccccggtcgggccgacgacggggtg
accgtgagcatcccgctgcccgtgctggcccgggtggacccggccggcttcgaggcccag
attcccggcctgcgcgccgatctggccgtcgcgctgatccgcaccctgcccaagacgctg
cggcgcaacttcgtgcccgcccccgatttcgcccgggccgcgttggaccgtatcgatgcc
gcccgcccgctggccgaagaacttgccggcgcgttgacccggatgaccggggtggtcgtc
cgtacggccgacttcgacccggacaaggtgcccgagcacctgcggatgaacttccgcatc
gtcgacgagcacggcgccaccgtggccagcggccgggacctgccgacgctgcagtcgacg
ctgcgcacggacacccagcgggcggtggtccaggccaccaagtcgctggaacgccatggc
ctgaccgcctttcccgagcccggggtgccgcggcgggtgcgggcgcgggtggccgggcac
gaggtcaccgggtacccggcgctggtggtggaggggccgggcaccgtcggtgtagccgtc
ttcgacagcgaggccgaccagcgccgcgccatgcgggccggcaccatcgagctgctggcc
gccgcgctgaccccgtcgctgacccgggtccggcagctgctcacccgcgagcagcagatc
accctggccaccgcgcccggcaccaccatcccaaccctggtcgccgacgccacccgggcc
gcggtggacgccctgctcgactgggcgggcgggccgagctggagtgcggccggcttcgcc
gcggtccggaccaagctgacgccgagcatgctcacgtcggtccgcgacgtgctggccgcc
gccgagacggtgctcagcgcggccggcgcggccgcgcgagcgctggacaccgcggagcga
ggcccaggggcggccgcggtcgccgacctgacccgggacatgcgcgcccagtggcgggcg
gcggtggcccccgggttcatcgtggccaccggcgcggccggcctgcccgaccgggcccgg
cagctgcaggcactgcggatccgggcggagcgggtccgcgaggcggccgggcgggaccgg
gagcgcctcgccgagatccgcgaattgcaggccgaggtggaccgcgcggtcgaggagctc
cccgaggagcgccggtcggacccggacgtgcaggccctgcaccacctgctggccgagtac
cgcgtcgccctgttcgcgcagccgatgcgcacgtcggtgccggtctcggccaagcgcatc
cgatcggccgccgcggcgctgggcggctga
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