Nocardia nova: NONO_c14660
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Entry
NONO_c14660 CDS
T03032
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nno
Nocardia nova
Pathway
nno03420
Nucleotide excision repair
nno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NONO_c14660
03430 Mismatch repair
NONO_c14660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nno03400
]
NONO_c14660
Enzymes [BR:
nno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NONO_c14660
DNA repair and recombination proteins [BR:
nno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NONO_c14660
MMR (mismatch excision repair)
Other MMR factors
NONO_c14660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
NYN
Motif
Other DBs
NCBI-ProteinID:
AHH16269
UniProt:
W5TAT3
LinkDB
All DBs
Position
1623541..1627956
Genome browser
AA seq
1471 aa
AA seq
DB search
MTITPGELAQTLGLPPPTDEQAAVIAAPPGPTLVVAGAGAGKTETMAARVVWMVANRLVA
PNAVLGLTFTRKAAQQLTTRIRTRLARLAGSPLLREIDGSGRLRATLAGAEPEISTYHSY
AGRLLSEHGLLLPVEPSATLLTETQLWQLAHRVVTGWDGDLDTERTPVSVTEAVLALSGQ
LAEHLVEPRQLATAHLELERLVETLPAGPRQRGGPNQELRSIVKAQQDRVALLPLVQRLG
EELRRRGALDFGSQMSLAARLAATHPEVGAAECERFRLVLLDEYQDTGHAQRILLSALFG
ERSVVDIGDRTAPPGTDFAGRPAVTAVGDPMQSIYGWRGASAANLPRFTTDFPAAPGAPA
PVLPLLTSWRNPPEALDLANLVAAPLREGGVTVDALRPRPQASAGTVALALTETIADERD
WAAGRIAAEWSNAAAADRPPPTSAVLVRRNADAAPLAEALRARGLPVEIVGLGGLLATPE
VADIVATLRLIADPSAGSAAMRILTGARWRLGVRDLAALAERARELSIITPQGRTESITD
TAALSEALRAVAPEPAEQAGVADAIADPGPPQRYSEPGYARIVALGRELAALRERGGQSL
PELVADVERTIAVGVESQTRRAAAGGGAGREHLDAFAEVVAGYAGDHRATLPGLLSFLAA
AEEVENGLEPGEVEVAHDRVQVLTVHAAKGLEWEVVAVPHVSRGLFPSGTAAGTWLGALA
ELPPSLRGDRQREPESGTSDSVRDGVPVLDLGDLYDRSDLEQAIKQHKDALARRRLDEER
RLFYVALTRTERALFVSAHHWAESGTTPKGPSDFLLELKRWTEHPESPGHGTVHIDRWDD
PPPPDAANPFTDNPAVAPWPRDPLGPRRGAVEAGAALVRAALADLPPETIDAHGRHGPTP
APPRTDRTVTSRPEPAEQPGTERAAAEPSGIARSETERPGAKTLSIESPGAERPETGAPR
TARAGAESPEFEPAGADWSAAEPSGVDPDAVESPSAAGSSAESPGAGRVGAERSAAESTS
AETSSAERADAVSQRATRPRSESSSVESGAPLTRGESSTTEGPVGERSEVVEPARQLDLF
ADADSGSGTAAAGSASNRTAGGPGSLLGERDQSEGKRRAPGTADAGEPRPADAPAEDDSE
DADAAFSDSALAEADSVADPDPEGWAADVDALLVEHFATADGVREVELPAQLPATALVDM
RADPAKLAARLRRPLPYPPSPLARRGTAFHAWLQRWFGAVGLLEFDELPGAADSGTRDGD
LVRLQEAFLASPWADRNPIDVEVGFETGIGGTVIRGRMDAVFSEPGDRWLVVDWKTGAEP
TRAEEKSVAVQLAVYRVAWARMMAARTGEPEAQVLEKVGAAFHYVRSGRTVAPAELAGPD
ELAELIATAAPQLLPADLPPEPEPGSEPPPEPESGYEPHSAPEPGVGPPSQLGLEPPPES
EPGSGPPPELEPGFEPPPEPDFEPPPESEGV
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcacgccgggggagttggcgcagaccctcggcctgcccccacccaccgacgaa
caggccgccgtgatcgcggcgccccccggccccaccctcgtggtggccggtgcgggtgcc
gggaagaccgagaccatggccgcccgggtggtgtggatggtcgccaaccggctggtcgcc
ccgaacgcggtcctggggctgacgttcacccggaaagccgcccagcagttgaccactcgc
atccgcacccggctggcgcggctggccggatcgccgttgctgcgcgagatcgacggcagc
ggccggttgcgcgccaccctcgccggagccgaaccggagatcagcacctatcactcctat
gcgggccggttgctgtccgaacacggtctgctgctgccggtggaaccctcggccaccctg
ctcaccgagacgcagctgtggcagctggcgcatcgggtcgtcaccggctgggacggtgat
ctcgacaccgagcgcacaccggtatcggtcaccgaggcggtgctggcgctgtccgggcaa
ctcgccgagcacctggtcgagccgcggcaactcgccaccgcacacctggaactggaacgg
ctcgtggagacgctgcccgccgggccccggcaacgcggcgggccgaatcaggaactgcgc
tcgatcgtcaaggcgcagcaggaccgggtggcactgctgcccctggtgcagcgcctcggt
gaggagttacgccgcaggggcgcactggatttcggctcgcagatgtcgctggcggcgcgg
ttggcggccacccatccggaggtcggggccgcggagtgcgagcggttccggctggtgctg
ctcgacgaataccaggacaccgggcatgcccagcggattctgctcagcgcgctgttcggg
gaacgttccgtcgtcgacatcggtgaccggaccgcgccgccggggacggatttcgcgggc
cgcccggcggtgaccgcggtcggtgacccgatgcaatccatctacggctggcgtggcgcc
tcggccgccaatctgccccggttcaccaccgatttccctgccgcaccgggagctccggcg
ccggtgctgcccctgctcaccagctggcgcaatccgcccgaggcgctggatctggcgaat
ctggtcgccgcgccgctgcgcgagggcggggtcaccgtggacgcgctgcggccccggccg
caggcgagcgccggaaccgtcgccctggcgctcaccgaaaccattgccgacgaacgggat
tgggccgccggtcggatcgcggcggaatggtcgaatgcggccgccgccgatcgaccgccg
ccgacctcggcggttctggtgcggcgcaatgccgatgccgcaccgctggccgaggcgcta
cgcgcgcgcggactgccggtggagatcgtgggcctgggcggactgctggccacaccggag
gtggccgatatcgtcgccaccctgcggttgatcgccgacccgtccgccgggagtgcggcg
atgcggatcctcaccggcgcccgctggcggctgggcgttcgcgatctggcggcgctggcg
gagcgggcgcgggagctgtcgatcatcaccccacagggccggaccgaatccatcaccgat
accgcggccctgtcggaggcgctgcgcgcggtcgcgccggaacccgccgaacaggcggga
gtggccgacgcgatcgccgatcccggtccaccacaacgatattcggagccgggatacgcg
cgcatcgtcgcactggggcgggagctcgcggcgctgcgcgagcgcggtggacagtctctg
cccgaactcgtcgccgatgtggagcggaccatcgcggtgggggtggagtcccagactcgc
cgggccgccgccggtggtggtgcgggtcgtgaacatctggacgcgttcgccgaggtggtc
gccggatacgccggggaccaccgcgccacgctgcccggtctgctgagcttcctggccgcc
gccgaagaggtcgaaaacggtttggagccgggcgaagtcgaggtggcgcacgaccgggtg
caggtcctcaccgtgcacgccgccaaggggctggagtgggaagtggttgccgtgccgcat
gtttcgcgcggcctgttcccgtccggaaccgccgccggaacgtggctgggcgccctcgcc
gaactacccccctcgttgcgtggggaccggcagcgtgaacccgaatcgggcacaagcgat
tccgttcgcgacggcgtgccggtcctggacctcggcgacctgtacgaccgcagcgatctg
gaacaggcgatcaaacagcacaaggatgccctcgcccgccgccgcctcgacgaggaacgc
cgcctgttctatgtggcactcaccagaaccgaacgcgcactgttcgtctcggcccaccac
tgggccgagagcggaaccacgccgaagggcccatcggatttcctgctcgagctgaaacga
tggaccgaacacccggagtcaccgggccacggcacggtccacatcgaccgctgggacgac
cccccaccgcccgatgccgccaacccgttcaccgacaaccccgccgtcgcgccttggccc
cgggatccactcggcccccgccggggcgccgtcgaagccggagctgccctcgtccgagcg
gccctggccgacctcccgccggaaaccatcgatgcgcatgggcgacatggccccaccccg
gccccgccccgcaccgatcgcaccgtgacaagtcggccggagcccgccgaacaacccggc
accgaacgggccgctgccgagccatcgggtatcgcccgatcggagactgagcgacctggt
gccaagacgttgagcatcgagtcaccgggcgccgagcggccggagacaggggcaccgcgc
accgcgcgcgccggtgccgagtcgccggaattcgagccggctggggccgactggtccgct
gccgagccatcgggcgtggacccggatgctgtcgagtcgccgagtgccgcaggctccagt
gccgagtcgccgggtgccgggcgggtgggagccgagcgatctgccgctgagtcgacgagc
gccgaaacatcgagcgccgaacgggcagatgcggtgtcgcagagggccacgcgaccgagg
agcgagtcgtcgagcgtcgagtcgggtgccccgctcaccaggggcgaatcatcgaccacg
gaaggaccggtcggcgagcggtcagaggtcgtcgaaccagctcgtcagctggacttgttc
gccgacgcggacagtggatccggcactgccgcagcaggttcggcatcgaaccgtaccgcc
ggtggacccggttcgctgctgggcgaaagggatcagagcgagggaaaacggcgtgccccg
ggcacggcggatgccggtgagccgaggcccgcggatgctccagcggaagacgactcggaa
gacgcggacgccgcgttctccgattccgcactcgccgaagcggattcggtggccgacccc
gatccggagggttgggccgcggatgtggacgcactgctggtcgagcacttcgccaccgcc
gacggtgtccgcgaggtggagttgcccgcgcagctgcccgcgaccgcactggtcgacatg
cgtgccgatccggcgaaactggcggcgcggttgcggcgtccgctgccgtatccgccgagc
ccgctcgcccggcgtggcaccgcctttcacgcctggctgcagcggtggttcggggcggtc
gggctgctggagttcgacgaactgcccggtgccgccgacagcggaacccgcgacggtgat
ctggtccggttgcaggaggcgttcctggcctcgccatgggccgatcgcaatcccatcgat
gtcgaggtggggttcgagacgggtatcggcggcaccgtcattcgcggccggatggacgcg
gtgttcagcgaaccgggcgatcgctggctcgtggtggactggaagaccggcgccgaaccg
acccgggccgaggagaagtcggtcgccgtgcagctggcggtctaccgcgtcgcgtgggcg
cgcatgatggccgcgcgcaccggcgaacccgaggcgcaggtgctcgaaaaggtcggcgcc
gcattccattacgtccgcagcggccgcaccgtggcccccgcggaactggcgggcccggac
gaactggccgaactcatcgccaccgcggccccgcagctactccccgccgacctcccgccc
gagccggagcccggctcggagccgccccctgaaccggagtccggctacgaaccgcactcg
gcaccggagccgggtgtggggccgccgtcccagctggggctggaaccgccgcccgagtcg
gagccgggttcgggaccgccgcccgaactggagcccggcttcgaaccgcctccggagccg
gatttcgagccgccgcccgagtcggagggcgtctag
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