KEGG   Nonomuraea sp. ATCC 55076: BKM31_52070Help
Entry
BKM31_52070       CDS       T04759                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
noa  Nonomuraea sp. ATCC 55076
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:noa00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    BKM31_52070
Enzymes [BR:noa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BKM31_52070
DNA repair and recombination proteins [BR:noa03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BKM31_52070
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(11529304..11530176)
Genome map
AA seq 290 aa AA seqDB search
MKVPVKVDGRELTLSNLDKVLYPDYGFTKAEVIDYYSRIAPVLLPHLRGRPLTVKRYPNG
VTGQSFFEKNAPDHTPDWVRRVNLPAPGSTKNRETIDFAVVEDLPTLVYYANLAALELHV
PQWRVDEDGRALPPDTLVFDLDPGAPATIVECTRVALLLRDVLKQEGLKALPKTSGSKGM
QLYADWDCREEPSAYAKRLAQLLEKEHPDQIVSVMTKKLRPGKVFIDWSQNNPAKTTVAP
YSLRAKDQPTVSTPLTWKEVESCEHPDDLVFTAPDALARVEKRGDLFGRA
NT seq 873 nt NT seq  +upstreamnt  +downstreamnt
gtgaaggtgccggtcaaggtggacggccgcgagctgaccctgagcaacctcgacaaggtg
ctctacccggactacggcttcacgaaggccgaggtcatcgactactacagccgcatcgcc
cccgtcctgctgccccacctgcgcggccgccccctgaccgtcaagcgctacccgaacggc
gtcaccggacagtccttcttcgagaagaacgcccccgaccacacccccgactgggtccgg
cgcgtgaacctgcccgccccgggcagcaccaagaaccgcgagaccatcgacttcgccgtc
gtggaggacctgcccacgctcgtctactacgcgaacctggccgccctggagctccacgtg
ccgcagtggcgggtggacgaggacggccgggcgctgccacccgacacgctcgtgttcgac
ctcgaccccggggcacctgcgacgatcgtcgagtgcacgcgcgtggcgctcctgctgcgc
gacgtactgaagcaggaagggctgaaagccctgccgaagaccagcgggagcaagggcatg
cagctgtacgcggactgggactgccgcgaggagccgtccgcgtacgccaagaggctcgcc
caactcctggagaaggagcaccccgaccagatcgtcagcgtgatgacgaagaagctgcga
cctggcaaggtgttcatcgactggagccagaacaacccggccaagaccaccgtcgccccc
tactccctgcgggccaaggaccagcccacggtctcgaccccgctcacgtggaaggaggtc
gagagctgtgaacaccccgacgacctggtgttcaccgcgcctgacgccctggccagggtg
gagaagcgcggcgaccttttcggccgggcgtag

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