Nitrosococcus oceani: Noc_2988
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Entry
Noc_2988 CDS
T00281
Name
(GenBank) Lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
noc01011
]
Noc_2988
Enzymes [BR:
noc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Noc_2988
Peptidoglycan biosynthesis and degradation proteins [BR:
noc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Noc_2988
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ABA59430
UniProt:
Q3J6W6
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Position
3379970..3381481
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AA seq
503 aa
AA seq
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MPYPFAVIFVGTLLFLTNPVLAKSWDLFPRPAMLEQDIRFWTRVYTEIDNNHGFIHDNRY
LNVIYEVTPLPIHLSSQAAKKHLQERRQYYQGILLRLAEGKRDNLTEEERRVLALWRRNV
NDKTLQAAASRLRFQRGQANRFREGLVRAGVYKPFILKTLDSLGLPRELAVLPHVESSFD
PTAYSHAGAAGLWQFTRPTGRRFMRIDHVVDERLDPFKATVAAARLLQHNYEKTGTWPLA
ITAYNHGVAGMQRAKKQMETSDIVAIRQNYKSPTFGFASRNFYVAFLAALEVDTNAKLYF
GHFQADKPVKSESIELTDFVPAHALQRVLGLDQTTLKQSNPALLSPVWKGHKYLPRGYEL
RIPCTPTCSRSKVLAYLAPWERFEKQIPNRFHKVQQGQTLSHIARRYRINVHQLVKLNGL
TNRHHIRMGQTLQLPFPATANRNHIRSKTGHYTVQRGDTLSRIAQRFGMTQQALLKSNDI
TDKHRIYAGQNLLLAQLPSSSEN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgccttatccctttgccgtgatttttgtaggtaccttgctatttttgactaaccccgtc
ttagctaagtcatgggatttgtttccccggccagcgatgctagaacaagatatccgtttc
tggacccgagtttacactgaaattgataataatcacggctttatccatgataatcggtac
cttaacgtcatttatgaagtaactcccctgcctatccatctaagctcccaggccgctaag
aaacaccttcaggagcggcggcaatactatcaagggatcttgcttcgccttgccgaaggc
aagcgggataatcttacggaagaagagcggcgagtactcgcactttggcggcggaacgtg
aacgataaaacactccaggccgccgcctcaaggctccgtttccagcgggggcaggcaaat
cgttttcgtgaaggattagtccgcgctggcgtctataaaccttttatcctcaaaactttg
gattccctcggcctaccacgggaacttgccgtattaccccatgtagagtcctcatttgac
ccaaccgcctattcccatgctggcgctgcggggctatggcagttcacccgtcccactggg
cgccgttttatgcgcattgaccatgtggtagatgaacgcctggatcccttcaaggccacg
gtggccgccgcccgtttgcttcagcataactatgaaaagaccggtacctggcccttagct
attaccgcttacaatcacggcgtagcagggatgcagcgggccaaaaagcaaatggaaacc
tcggatattgtggctatccggcaaaattataaaagccctacttttggttttgcctcgcgt
aatttttatgtggcctttcttgcggccttggaggtagataccaacgcaaaactttatttt
ggccactttcaggcagataaaccagtaaaaagtgagagtatagaacttactgacttcgtc
cctgctcatgccctgcagcgggttttaggactcgatcaaaccacgctcaaacaaagcaat
cctgccctgctctcgcccgtttggaaaggccataaatacttgcctcggggctatgagcta
cgtataccttgtacccccacttgtagtagatctaaagtgctagcctatctagccccttgg
gaacgatttgagaaacaaataccgaatcgttttcataaagttcaacagggacaaacccta
tctcatattgctcggcgctatcgcattaatgtccatcagctagtaaaattgaatgggctt
accaaccgccatcacatccggatgggacaaaccctacagctacctttccctgccactgca
aacagaaaccatattcgctcaaagactgggcattacacggtgcaacgtggcgatacgctt
tctagaattgcccaacgttttggaatgacccagcaagcactcctaaaaagcaatgatatt
accgataaacatcgaatttatgctggccaaaatttactgctagcacaactcccttcctcc
tctgaaaactag
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