KEGG   Nostoc sp. PCC 7107: Nos7107_0829
Entry
Nos7107_0829      CDS       T02362                                 
Name
(GenBank) Ribocuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
nos  Nostoc sp. PCC 7107
Pathway
nos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Nos7107_0829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nos03019]
    Nos7107_0829
Messenger RNA biogenesis [BR:nos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Nos7107_0829
SSDB
Motif
Pfam: RMMBL RNase_J_C Lactamase_B Lactamase_B_2
Other DBs
NCBI-ProteinID: AFY41495
UniProt: K9Q744
LinkDB
Position
complement(981900..983669)
AA seq 589 aa
MAKNEANSALKIIPLGGLHEIGKNTCVFEYDDEIILLDAGLAFPTEAMHGVNIVLPDTSY
LRENRHKIKGMVVTHGHEDHIGGIAFHLKQFEIPVIYGPRLAMAMLEGKLEEAGVRDRTE
LRSVLPRDLVRIGEHFFVEYIRNTHSIADSFTVAIHTPLGVVIHTGDFKFDHTPVDGEKF
DVQRLAEHGEKGVLCLLSDSTNSEVPGFTPSERSVYPNLDRVFSQATGRLFVTTFASSVH
RINMILQLAQKHNRVVTVVGRSMLNLIAHARNLGYVKCEDNLLQPLHTVRNLPGENVLIL
TTGSQGETMAAMTRIANQEHPHIKIREGDTVVFSANPIPGNTIAVVNTIDKLMIQGAKVV
YGRDKGIHVSGHGCQEDQKLMIALTRPKFFLPVHGEHRMLVKHSETAQSMGIPAENMVII
QNGDIVELTENSIRAAGKVQAGIELVDTSSSGMVSAKVLQERQRMAEEGIVTIAAAIDWT
GKLMAKPEIHLRGVVTSVERSLIQKWVQQRIEEILGVRWSEFASLEGEQPEIDWGGLQGT
LERELARSIRRELQCQPTVTLLMQIPDEPPVKVADGRRRRTRTAAQVAS
NT seq 1770 nt   +upstreamnt  +downstreamnt
atggctaaaaacgaagctaactccgccctaaaaattattcctttgggcggtttacatgaa
attggcaaaaatacctgcgtttttgaatacgatgatgaaatcatcttattagatgcgggt
ttagccttccctacagaagcaatgcacggagtaaacattgttcttcccgatactagttat
cttagggaaaaccggcacaaaattaaaggaatggtcgttactcacggtcatgaagaccat
atcggtggtattgctttccacctcaagcaatttgaaattccggtaatttacgggccaagg
ctggcaatggccatgctggaaggaaaattagaagaagcaggagtacgcgatcgcaccgag
ttgcgttcagttctgccccgtgatttagtcaggattggcgaacatttctttgttgagtac
attcgtaatacccattccatcgctgatagttttaccgttgctattcatactcctctgggt
gtcgtgattcacacaggggattttaaatttgaccacaccccagttgatggggaaaaattt
gacgtgcagcgtttagcagaacatggtgaaaaaggtgtgctgtgcttgctgagtgattcc
accaactcagaagtccccggattcaccccttcggaacgttcggtatatccaaatttggat
cgggtatttagtcaagccactggacgattgtttgtcactaccttcgcctcttcggtgcat
cgcatcaacatgattttgcaactggcgcagaaacacaatcgtgtggtaacagttgttggg
cgttccatgctgaatttgattgcccatgcccgtaatttgggttatgtcaagtgtgaagat
aacttactgcaaccactgcatacagttcgcaatctgccgggcgaaaatgtgttgattctc
accacaggttctcaaggcgagacaatggcggcaatgacccggattgctaaccaagaacac
ccccatatcaaaatcagggaaggcgatactgttgtcttctctgccaaccctattcctggc
aatacgatcgcagttgtcaacaccattgataagttgatgattcagggtgcgaaagtggtc
tacggacgagataagggaattcacgtttctggtcacggctgtcaagaagaccaaaagttg
atgattgctttaactcgtcccaagttctttttgcccgttcacggtgaacatcggatgtta
gttaaacactccgaaactgcccaaagcatgggtatccccgccgaaaatatggtgattatc
cagaatggggatattgtcgaactgacagaaaattccatccgtgcggctggtaaagtgcag
gcggggatagaactggtggatacttctagttctgggatggtcagtgccaaggtgctgcaa
gaacggcaacgtatggcagaagaagggattgtaactattgctgcggcgattgattggact
ggtaaactgatggccaagccagaaattcacttgcgtggtgttgttaccagcgttgagcga
tcgctgatccaaaaatgggtacagcagcgcattgaagaaatcctgggcgtgcgttggtca
gaatttgcctctctagaaggtgaacaaccagaaatcgactggggtggattgcaaggaact
ctagaacgagaattagcccgttcaattcgtcgggaattacaatgtcaaccaactgttacc
ttgttgatgcaaattcctgatgaaccacctgtaaaagttgcggatggtagaaggcggcga
actcggacagcggcacaagttgcatcttaa

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