Nostoc sp. PCC 7107: Nos7107_0829
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Entry
Nos7107_0829 CDS
T02362
Name
(GenBank) Ribocuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
nos
Nostoc sp. PCC 7107
Pathway
nos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nos7107_0829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nos03019
]
Nos7107_0829
Messenger RNA biogenesis [BR:
nos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Nos7107_0829
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GFIT
Motif
Pfam:
RMMBL
RNase_J_C
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
AFY41495
UniProt:
K9Q744
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Position
complement(981900..983669)
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AA seq
589 aa
AA seq
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MAKNEANSALKIIPLGGLHEIGKNTCVFEYDDEIILLDAGLAFPTEAMHGVNIVLPDTSY
LRENRHKIKGMVVTHGHEDHIGGIAFHLKQFEIPVIYGPRLAMAMLEGKLEEAGVRDRTE
LRSVLPRDLVRIGEHFFVEYIRNTHSIADSFTVAIHTPLGVVIHTGDFKFDHTPVDGEKF
DVQRLAEHGEKGVLCLLSDSTNSEVPGFTPSERSVYPNLDRVFSQATGRLFVTTFASSVH
RINMILQLAQKHNRVVTVVGRSMLNLIAHARNLGYVKCEDNLLQPLHTVRNLPGENVLIL
TTGSQGETMAAMTRIANQEHPHIKIREGDTVVFSANPIPGNTIAVVNTIDKLMIQGAKVV
YGRDKGIHVSGHGCQEDQKLMIALTRPKFFLPVHGEHRMLVKHSETAQSMGIPAENMVII
QNGDIVELTENSIRAAGKVQAGIELVDTSSSGMVSAKVLQERQRMAEEGIVTIAAAIDWT
GKLMAKPEIHLRGVVTSVERSLIQKWVQQRIEEILGVRWSEFASLEGEQPEIDWGGLQGT
LERELARSIRRELQCQPTVTLLMQIPDEPPVKVADGRRRRTRTAAQVAS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaacgaagctaactccgccctaaaaattattcctttgggcggtttacatgaa
attggcaaaaatacctgcgtttttgaatacgatgatgaaatcatcttattagatgcgggt
ttagccttccctacagaagcaatgcacggagtaaacattgttcttcccgatactagttat
cttagggaaaaccggcacaaaattaaaggaatggtcgttactcacggtcatgaagaccat
atcggtggtattgctttccacctcaagcaatttgaaattccggtaatttacgggccaagg
ctggcaatggccatgctggaaggaaaattagaagaagcaggagtacgcgatcgcaccgag
ttgcgttcagttctgccccgtgatttagtcaggattggcgaacatttctttgttgagtac
attcgtaatacccattccatcgctgatagttttaccgttgctattcatactcctctgggt
gtcgtgattcacacaggggattttaaatttgaccacaccccagttgatggggaaaaattt
gacgtgcagcgtttagcagaacatggtgaaaaaggtgtgctgtgcttgctgagtgattcc
accaactcagaagtccccggattcaccccttcggaacgttcggtatatccaaatttggat
cgggtatttagtcaagccactggacgattgtttgtcactaccttcgcctcttcggtgcat
cgcatcaacatgattttgcaactggcgcagaaacacaatcgtgtggtaacagttgttggg
cgttccatgctgaatttgattgcccatgcccgtaatttgggttatgtcaagtgtgaagat
aacttactgcaaccactgcatacagttcgcaatctgccgggcgaaaatgtgttgattctc
accacaggttctcaaggcgagacaatggcggcaatgacccggattgctaaccaagaacac
ccccatatcaaaatcagggaaggcgatactgttgtcttctctgccaaccctattcctggc
aatacgatcgcagttgtcaacaccattgataagttgatgattcagggtgcgaaagtggtc
tacggacgagataagggaattcacgtttctggtcacggctgtcaagaagaccaaaagttg
atgattgctttaactcgtcccaagttctttttgcccgttcacggtgaacatcggatgtta
gttaaacactccgaaactgcccaaagcatgggtatccccgccgaaaatatggtgattatc
cagaatggggatattgtcgaactgacagaaaattccatccgtgcggctggtaaagtgcag
gcggggatagaactggtggatacttctagttctgggatggtcagtgccaaggtgctgcaa
gaacggcaacgtatggcagaagaagggattgtaactattgctgcggcgattgattggact
ggtaaactgatggccaagccagaaattcacttgcgtggtgttgttaccagcgttgagcga
tcgctgatccaaaaatgggtacagcagcgcattgaagaaatcctgggcgtgcgttggtca
gaatttgcctctctagaaggtgaacaaccagaaatcgactggggtggattgcaaggaact
ctagaacgagaattagcccgttcaattcgtcgggaattacaatgtcaaccaactgttacc
ttgttgatgcaaattcctgatgaaccacctgtaaaagttgcggatggtagaaggcggcga
actcggacagcggcacaagttgcatcttaa
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