KEGG   Neofusicoccum parvum: UCRNP2_4216
Entry
UCRNP2_4216       CDS       T03126                                 
Name
(GenBank) putative u2 snrnp component prp10 protein
  KO
K12828  splicing factor 3B subunit 1
Organism
npa  Neofusicoccum parvum
Pathway
npa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:npa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UCRNP2_4216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:npa03041]
    UCRNP2_4216
   03036 Chromosome and associated proteins [BR:npa03036]
    UCRNP2_4216
Spliceosome [BR:npa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    UCRNP2_4216
 Complex B
    UCRNP2_4216
 Complex C
   U2 SnRNP specific factors
    UCRNP2_4216
Chromosome and associated proteins [BR:npa03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    UCRNP2_4216
SSDB
Motif
Pfam: SF3b1 HEAT_EZ HEAT Htt_N-HEAT_1 Adaptin_N UTP20_C DUF3385 XMAP215_CLASP_TOG RRP12_HEAT DUF5742
Other DBs
NCBI-ProteinID: EOD49059
UniProt: R1GSQ6
LinkDB
Position
Unknown
AA seq 1204 aa
MSDADFEAITRLQQERNAAASGKKGSKTFDPANQRTDNSTKASLTESFDTDLYERNGGNK
YDGYLTSIPANDDEDMEDVEDGRRLVGQYTATRAQMDEFTTGDGMEEDILMDREKQAQIQ
SRETDYQRRRFERGGGDEEGLSYKDIMKKREREREERERQEKKARGEEVEEHQPTLKDGS
DKENVENGTNGATGGRKRKKRWDVSSEDASANGANGAVESEPKKRSRWDQTPSVPVPGAP
DATPRRKSRWDQAPALGATPVGGTAGLATPAHPSQGGAAVLSFGTDISGRNAPISDEELD
ELLPGEDKGYKILIPPPGYEPVRAPAKKVAATPTPAGLAGGFMMQEPADTRALGKQLPSE
IPGVGELQFFKAEDMQYFGKLMDGQDEEELSVDEMKERKIMRLLLKVKNGTPPMRKTALR
QLTDNARNFGAGPLFNQILPLLMERTLEDQERHLLVKVIDRVLYKLDDMVRPYVHKILVV
IEPLLIDQDYYARVEGREIISNLAKAAGLAHMISTMRPDIDHPDEYVRNTTARAFAVVAS
ALGIPALLPFLRAVCRSKKSWQARHTGVKIVQQIPILMGCAILPHLKGLVDCIGDNLNDE
QTKVRTVTALAIAALAEAANPYGIESFDDILNPLWTGARKQRGKGLAGFLKAVGYIIPLM
DEEYANYYTGQIMEILLREFSSPDEEMKKVVLKVISQCASTEGVTAGYLKENVLNEFFKS
FWVRRMALDKRNYRQVVETTVDLGQKVGVSEIVERIVVNLKDESEPYRKMTVETLEKVIA
SLGAADIGERLEERLIDGILHAFQEQSIEDVVMLNGFGTVVNALGTRCKPYLPQIVSTIL
WRLNNKSATVRQQAADLVSRIALVMKQCGEDSLMGKLGTVLYEYLGEEYPEVLGSILGAL
RSIVTVVGINQMQPPIKDLLPRLTPILRNRHEKVQENTIDLVGRIADRGPESVNAREWMR
ICFELLDMLKAHKKGIRRAANNTFGFIAKAIGPQDVLATLLNNLRVQERQSRVCTAVAIG
IVAETCAPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMAKDYVYAVTPLLEDAL
IDRDQVHRQTAASVVKHVALGVVGLGCEDAMVHLLNLLYPNIFETSPHVIDRIIEAIEAV
RVAVGTGVVMNYVWAGLFHPARKVRQPYWRLYNDAYVHSADSMVPYYPDMGDPNCVRHEL
NIIL
NT seq 3615 nt   +upstreamnt  +downstreamnt
atgtctgacgccgactttgaggccatcacgcgcctgcagcaggagcgcaatgctgcggct
tcagggaagaaaggttcaaagactttcgacccggctaaccagaggactgacaactcaacg
aaggcctccctgacggaatcctttgacaccgacctctatgaacgcaatgggggtaacaag
tacgacggctacctcacctccatcccggccaacgacgatgaggatatggaggatgtcgag
gatggccgcaggctcgtcggccagtacaccgccacgcgcgcgcagatggacgagttcacc
accggcgacggcatggaggaagacattctgatggatcgggagaagcaggctcagatccag
tctcgcgaaaccgactaccagaggcgccgcttcgaacgtggtggcggcgacgaggagggt
ctgagctacaaggacatcatgaagaagcgcgagcgtgagcgggaggagcgcgagaggcaa
gagaagaaagcgaggggcgaggaggtcgaggaacaccagcccaccctcaaggacggaagc
gataaggagaacgtggagaacggcaccaacggcgccaccggcggtcgcaagcgtaagaag
cgttgggatgtctcgtcggaggatgcctctgctaacggagccaacggtgccgtggagtct
gagcccaagaagcgctccaggtgggaccagactccttcggttcctgttcccggtgctccg
gacgccaccccgaggcgtaagtcgaggtgggatcaggcacctgcgttgggcgcgacgcct
gtgggcggaactgccggtcttgccacacctgcacacccatctcagggcggcgcagcggtc
ctttctttcggcacggatatctctggtcgcaacgctcccatttccgacgaagagctcgat
gagctgctccctggagaagacaagggttacaagatcctcatcccgccgcctggatatgag
cctgttcgcgctcctgctaagaaggtggcagccactcctacgccagccgggttggctggc
ggcttcatgatgcaagagcccgcggataccagagccctcggaaagcagctaccgagcgag
attccgggcgttggcgagttgcagttcttcaaagcggaggatatgcaatacttcggcaag
cttatggatggtcaggatgaggaagagctgagcgtggacgagatgaaggagcgtaagatc
atgcggctgctcctcaaggtcaagaacggaacgccaccgatgcgtaagactgcactccgt
cagctcaccgacaatgcccggaactttggagctggtcccctgttcaaccagattcttccc
ttgctcatggagaggaccctcgaggatcaggagcgccatcttctcgtcaaggtcattgac
cgtgttctttacaagcttgatgacatggtccggccatatgtccacaagatcttggtcgtc
attgagcccctcctcattgatcaagattactatgctcgtgtcgaaggtcgtgagattatc
tccaaccttgcgaaggcggccggtcttgctcacatgatcagtacgatgagacccgatatc
gatcatcccgatgagtatgtccgtaatacgactgctcgtgctttcgctgtcgtcgcttcc
gctcttggcatccctgcgcttctccccttcttgcgggccgtgtgccgtagcaagaagtca
tggcaggctcgtcacactggtgtcaagattgtgcagcagatcccaattctcatgggttgc
gccattctgcctcacctgaagggtctggttgactgcattggcgataacctgaacgatgag
cagaccaaggtgcgaactgtcacggctctagccattgctgccctggctgaagcagcaaac
ccctacggtatcgagagcttcgatgatatcctgaaccctctctggactggagcacggaag
cagcgtggcaagggattggccggcttcctcaaggctgttggttacatcatccctttgatg
gacgaggagtatgccaattactacactggtcagatcatggagattcttctccgtgagttc
tcctcaccagacgaggagatgaagaaggtggttctaaaggtcatctcacaatgtgctagt
acggaaggtgtcacggccggttacctgaaggagaatgttttgaacgaattcttcaagagc
ttctgggtccggcgcatggctctggataagcgcaactatcggcaggtcgtggagactacc
gttgatctcggccagaaggtcggtgtcagcgagattgtggagcggatcgtcgtcaacctc
aaggatgagagcgagccttaccgcaagatgaccgtcgagactctcgagaaggtaattgcc
agccttggtgccgccgacatcggtgaaaggttggaggaacgcctcatcgacggtatcctg
cacgcattccaggagcagagcatcgaggatgttgtcatgctcaacggattcggcaccgtt
gtcaacgctctcggcacccgttgcaagccctaccttcctcagattgtcagtaccattctc
tggagactcaacaacaagtctgcgaccgtcagacagcaagctgccgatctggtttcccgc
attgctttggtcatgaagcagtgtggagaggattccctcatgggcaagcttggcacggtt
ctgtacgaatacctcggtgaagagtatccggaggtgctgggttctattctgggcgctctg
aggtccatcgtcaccgtggtgggtatcaaccagatgcagccaccgatcaaggatcttctc
ccgcgtctcacgcctattcttcgtaaccgccacgagaaggtgcaggaaaacacgattgac
ctggtcgggcgtatcgctgatcgcggtcccgagagtgttaatgctcgcgagtggatgaga
atctgctttgagcttctagacatgctcaaggcccacaagaagggcatcagacgtgctgcc
aacaacacgttcggtttcatcgccaaggccatcggtccccaggatgtcctcgcaacgctc
ctcaacaacctgagggtccaggagcgtcaatctcgtgtttgtacggccgttgccatcggt
atcgttgccgagacttgcgcgcccttcaccgtccttcctgcgctgatgaacgagtaccgt
gttcctgagctcaacgtccagaacggtgtgctgaagtctctttccttccttttcgagtac
atcggagagatggcaaaggactatgtctatgccgtcacgccgcttctcgaggacgctctc
atagatcgcgaccaggttcatcgtcagacggcggcgtcggttgtcaagcacgttgccctc
ggtgttgttggtctcggttgtgaggacgccatggtgcacttactcaatctgctctacccc
aacatcttcgagaccagcccgcacgtcatcgaccgcatcatcgaggctatcgaggcagtt
cgtgtggccgtgggcacgggcgttgtcatgaactacgtctgggccggtctcttccacccg
gcacgcaaggtccgccagccatactggcgcctgtacaacgacgcgtacgtccactcggcc
gactcgatggtgccctactaccccgatatgggcgacccaaactgcgtcaggcacgagctg
aacataatcctctga

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