Nanorana parkeri (Xizang Plateau frog): 108800620
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Entry
108800620 CDS
T04897
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04110
Cell cycle
npr04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108800620 (SMC1B)
04114 Oocyte meiosis
108800620 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npr03036
]
108800620 (SMC1B)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108800620 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
108800620 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
Motif
Other DBs
NCBI-GeneID:
108800620
NCBI-ProteinID:
XP_018428105
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All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MPQHSAGSSSRFKVAISTPLTQAWSTVVTIRKCPTAISGVQVDRKWLQVIRKSNLMDALS
FVMGEKTSNLRVKSVRELISGANVGRPVSSTASVQLVYCDDNGEEKTFSRRIVGGSSEYR
LNDTPVGRSAYVLELEKIGIISKARNCLIFQGEVESIAVKKPKERTQLFEKISNSAELSE
EYERKKKVMLQAEEDAQFCYNKKKNVALERKHAKIKTLERSNADRYKRLRQELLKSKMQL
QLFQLFYNENKLENLLGDLNEKHVETNSRKDQLADTESELKAAKQGLGRLNREQQQIEKE
IKVLEASLNKLRPQFIKAKENSAHQMKKVEITKSSLKKSEKRCGILEQDIKGMEKEIDEV
QQAWRVFDRQLEEDHLRRQADVELEQSQLDQYRLLKDEARKKNAVLGQQLEKFHWEQGAT
EEKIAIEQRRQKEVEVNKKCVEEQIEDYNRRVGKLEDYINTCIKALDEHRGQEEQLVREI
DYSNQRMSEVNEELNITVSELQNARIDYHESNSQKRRAEILESMKRMYPDAVFGRLFELC
HPIHKKYQLAVTKVFGKYMNAIVVTSERVARDCIRFLKEERAEPETFLSLDYIHLKPINE
KLREVKGCKMLIDVVQCSSASLKKVVQFVCGNGLVCETVKEARHIAFDGPERQKTVSLDG
TMFLKSGVISGGSSDLRFRAKRWDEKEITTLKEKRDALTSELKELMKLKRKESDLKQLHA
QIQGTQTRLKYSQSELEVIKKKNLASCFAEKSRLESEFSNAECQFTMLTEELERHKVKTT
DLQEQMNKLEDEVFRRFCEEIGVENIRDYEEEHVKQHQETDKKRLEFGNQKTRLEIQVEY
IHEQLKKEAEKGMKLKEGLSKEEEQVTQLKKDERRYLRLVDEALSQQLEFKNHLTLKHSE
VSEAQKLVEETRKKLLNINREIGKKQKEAMTIESLIEQKRLEKHNLLLDCKVQDLPITLL
AGCLDDIMEVEVESESTLTATEIYEREGTFRIDYGDLPHNLKVLMTDNEFSAELMRMRQQ
CISHENILLKTCAPNLRALEKLQNISGKFQETTDAFETSRRKASLCRTQFEQVKKKRYEL
FSQCFEHVSVAIDQIYKKLCRNNSAQAFLILENSEEPYLDGIGYNCVAPGKRFMPMDNLS
GGEKSVAALALVFAIHSFRPAPFFILDEVDAALDNSNIGKVTSYIKEQTRQHFQMVVISL
KEEFFSKADALIGVCTEHDEMCSQVLTLDLTIYEDDEDSDSERRT
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacagtgcaggatcatcttcccgcttcaaagtggccatatcaacaccttta
acacaggcatggtccactgttgtcaccatcaggaaatgccccacagccatctctggagtg
caggtagacagaaaatggctgcaggtgatcagaaaatcaaatttgatggatgcgctaagt
tttgtgatgggtgagaagacatctaatttaagagtgaagagtgttcgagagcttattagt
ggagctaatgtagggcgaccggtctcctctactgccagtgtgcaattggtttattgtgat
gacaatggggaggaaaagaccttttccaggaggattgtaggaggctcctcagaatatcga
ctcaatgatacaccagtgggacggtcagcctatgtcctggagcttgaaaaaattggaata
atttcaaaggccagaaattgcctcatattccagggtgaggtggaatcaattgcagtgaag
aaacctaaagaaagaacccaactttttgaaaaaataagcaactcagcagaactatcagaa
gagtatgagcgaaagaaaaaagtcatgttacaagctgaggaagatgcacagttctgttat
aataagaagaagaatgtggcattagaaagaaagcatgccaagataaaaacactggaaaga
tccaatgctgatcgttataaaaggcttcgccaggaacttcttaaaagtaaaatgcaactc
cagctttttcaacttttttacaacgaaaataaattggagaatttattaggagacttaaat
gaaaaacatgtggaaaccaacagtcgcaaagaccaacttgctgacactgaatctgaactg
aaagctgcaaagcaagggcttggaaggctgaacagagagcagcagcagattgaaaaagaa
ataaaagttctcgaagcatcactaaataagttgaggccccaattcattaaagcaaaagaa
aattctgcacaccagatgaagaaggttgaaatcaccaagtcttctctgaagaaaagtgag
aaacgttgtggcatactggagcaagacattaaggggatggaaaaggagattgatgaagta
cagcaggcctggagagtatttgatcgtcagcttgaagaggatcatttaagaagacaggca
gatgttgagttggagcaaagtcagctggatcaatacaggctgttaaaagatgaggcgaga
aagaagaatgctgtactggggcagcagctggaaaagtttcactgggaacagggggctaca
gaagaaaagatagcgattgagcagaggagacaaaaagaagtagaggtaaacaaaaagtgt
gtagaggagcaaattgaagactacaacaggagagtggggaaattagaggactacatcaat
acttgcatcaaagcccttgatgagcacaggggccaggaggaacagctcgttcgtgaaata
gattacagtaatcagaggatgtcagaagtgaatgaggagctgaacattactgttagtgag
ctgcagaacgccaggatcgattaccatgaaagtaacagccagaagaggagagcagaaatt
ttggagagcatgaaaagaatgtacccagacgctgtatttggcagattgttcgagctgtgt
catccaattcacaaaaagtaccaactagctgttaccaaggtctttgggaagtacatgaat
gccattgttgtgacaagtgagagagtggcgagggactgcatccgatttctcaaagaagaa
agagctgagcctgagacattcctttccttggactatatacatttaaagccaatcaatgaa
aagctgagggaagttaaaggctgcaaaatgttgattgatgtagtgcaatgctcaagtgcc
tcgctaaaaaaagtggttcagtttgtatgtgggaatggcctggtgtgtgaaacggtcaag
gaggcaagacatattgcatttgatggtcctgagaggcaaaaaaccgtatctttggatgga
actatgttcttgaaatccggtgtgatatctggaggctcaagtgatttgaggttcagagcc
aagcgctgggatgagaaagagataaccacactaaaagaaaaaagagatgctttgacaagt
gaactaaaagagctaatgaagctaaagaggaaggagagtgatttaaagcagcttcatgct
cagatacaaggaacacaaacccgtctcaagtattctcaaagtgaactagaagttattaag
aagaaaaatcttgccagctgctttgcggaaaaatcaaggctggaaagtgagttctcaaat
gctgaatgtcagtttacaatgttaacagaagaacttgaaagacataaggtgaaaaccaca
gaccttcaagaacaaatgaataagctggaggacgaagtctttaggagattttgtgaggag
ataggagtggaaaacattcgcgattatgaggaagagcatgttaaacaacaccaagaaact
gacaagaaaaggctggagtttggaaatcagaagacacgtctggaaattcaagttgaatac
attcatgaacaactaaagaaagaagcagaaaaagggatgaagcttaaggagggattgagc
aaagaggaagagcaagttacgcagcttaagaaggatgaacggcgatatctcaggttagtt
gatgaagccttatctcagcaactggaattcaaaaatcatctgactcttaaacactctgag
gtctctgaagctcagaaactggttgaagaaacccgaaagaagctgctaaacattaacaga
gaaattggcaagaagcagaaggaagcaatgaccattgaaagtctgatagaacagaagagg
ttagaaaaacacaatttactcctggattgtaaagtacaagatttgccgataactctacta
gccggctgtttggatgatatcatggaagttgaggtagaaagtgaaagcactctaactgct
actgaaatctatgaacgagaagggacttttcgcatagactatggcgatcttcctcataat
ctaaaggtgttaatgacagacaatgaattctcagctgaacttatgcgaatgcgtcaacaa
tgtatttctcatgaaaacattctgctgaagacatgtgctccaaatctgagagctctggag
aaactccagaatatcagtggcaagtttcaagaaaccacagatgcttttgagaccagcaga
aggaaagccagtctgtgtaggacacaatttgagcaggtgaagaagaagagatatgagctt
tttagccagtgttttgagcatgtttctgtagctatcgatcagatctacaagaagctctgc
agaaataacagcgctcaggcctttcttattcttgagaattcagaggaaccgtatcttgat
ggaattggctacaactgtgtagctccagggaagagatttatgcctatggacaacttgtct
ggaggagaaaagtctgtagctgcgctggctctggtctttgctattcacagctttcgtcct
gcaccgttcttcattttagatgaggtagatgcagctttggacaacagtaacatcggtaaa
gtgactagttacatcaaagaacagacaagacagcacttccaaatggtggtcatttcccta
aaggaagagtttttttccaaagcggatgctttaattggagtgtgcacagagcatgatgaa
atgtgtagccaagtgctgactctggacctcactatctatgaagatgatgaagactctgat
agtgaaagaagaacatag
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