Nitratifractor salsuginis: Nitsa_0144
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Entry
Nitsa_0144 CDS
T01405
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nsa
Nitratifractor salsuginis
Brite
KEGG Orthology (KO) [BR:
nsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsa03032
]
Nitsa_0144
03400 DNA repair and recombination proteins [BR:
nsa03400
]
Nitsa_0144
Enzymes [BR:
nsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Nitsa_0144
DNA replication proteins [BR:
nsa03032
]
Prokaryotic type
DNA Topoisomerases
Nitsa_0144
DNA repair and recombination proteins [BR:
nsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Nitsa_0144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
Zn_ribbon_recom
DNA_ligase_ZBD
Zn-ribbon_8
Toprim_4
ADK_lid
Motif
Other DBs
NCBI-ProteinID:
ADV45417
UniProt:
E6WYP6
LinkDB
All DBs
Position
complement(132696..134897)
Genome browser
AA seq
733 aa
AA seq
DB search
MKNLIIVESPAKARTISNFLGKDYKVVASKGHIRDLPKSSFGITVEEGKFIPKYTVPREA
SPTVKELKKLAKEAETVYIATDEDREGEAIGYHIAKAIGKDPEELPRIVFHEITKSAIQH
ALENPRRIDMQSVDAQQTRRLLDRIVGYKLSPLLANKIQKGLSAGRVQSAALKIVVDRER
EIKAFKPEEYWSIKGIFDKTVDADIYSFEGKKIEKMTLKNGEEANKIVESAKEESFKVAS
IETARRKSKTPPPFMTSTLQQAASTQLGFSPKKTMMVAQKLYEGVKTHKGTMGVITYMRT
DSLNLAKEAVAEAREFIEKNFGEKYLPAKPKFYASKAKGAQEAHEAIRPTMTEFTPKLAA
KYLAPDELKLYRLIYNRFLACQMTEAEFETQTILFAGEKSVFKATGRKLIFDGFYRITGY
NEKDRLLPELKEEQPVELTEIKAEQHFTEPPARYNEASLIKKLESLGIGRPSTYAPTITI
LQNRKYIEIEKKRIHPTEIAFTVIEMLEKHFPEIVDSNFTARMEETLDKIAEGKEDWQKV
LWEFYQPFIEKIAEGKKNIPSQKMAEPIGEKCPECGAELLKRKGRYGEFIACSNFPKCRY
SRNIDGTEPEKPEETDEICDKCGAPMVIKNSRRGKFLACSAYPKCKNAKPLTPPKELAVP
CPECGGKLIERQGRRGTFYGCANYPKCKFIANFEPVDKKCPECGYLMGVKHLKSGDVYVC
FKCKHKVSAEAET
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctcattatcgtcgaatcaccggccaaggcacggaccatcagcaacttcctg
ggcaaggattacaaagtcgtcgcctccaaaggacacatccgggatctgcccaaaagcagc
ttcggcattaccgtcgaggaggggaaattcatccccaaatacaccgtccccagagaggct
tcccccacggtcaaagagctcaaaaagctggccaaagaggcagagaccgtctacatcgcg
accgatgaggaccgcgagggagaagcgatcggctaccacatcgccaaggccatcggcaag
gaccccgaagagctgccgaggattgtcttccacgagatcaccaagagcgccatccaacac
gccctggagaatcccagacggatcgatatgcagagcgtcgatgcccagcagacccggcgc
ctgctcgaccggatcgtaggctacaagctctcccccctgctggcgaacaagatccaaaag
ggcctctccgccggccgggtccagagcgcggcgctcaagatcgtcgtcgaccgggagcgg
gagatcaaagccttcaaacccgaagagtattggagtatcaagggaatcttcgacaagacg
gtcgatgccgatatctacagcttcgagggcaaaaagatcgagaaaatgaccctcaaaaac
ggcgaagaggcgaacaagatcgtcgaatcggccaaggaagaatccttcaaggtcgcctcc
atcgaaaccgcccggcgcaagagcaaaaccccgcccccctttatgacttcgaccctccag
caggccgcttcgacccagctgggtttctcccccaaaaagacgatgatggtcgcccagaaa
ctctacgaaggggtcaagacccacaaagggacgatgggggtcatcacctatatgcggacc
gacagcctcaaccttgccaaagaggcagtggctgaagcacgggaattcatcgagaagaac
ttcggagagaagtatctccccgccaaacccaaattctacgcctccaaagccaagggagcc
caggaagcccacgaggcgatccgccccacgatgaccgaattcacccccaagctggccgcc
aagtacctggctcccgacgagctcaaactctaccgcctcatctacaaccgcttcctggcg
tgccaaatgaccgaagcggagtttgaaacccagaccatcctctttgccggagagaaatcg
gtcttcaaagccaccggccgcaaactgatcttcgacggcttttaccgcatcaccggctac
aatgaaaaagatcggctcctgcctgagctcaaagaggagcagccggtcgaactcaccgag
atcaaagccgaacaacacttcaccgagccccccgcccgctacaacgaagcgagcctcatc
aaaaagctcgaatctctgggtatcgggcgccccagcacctatgcccccaccatcacgatc
ctgcagaaccgcaaatacatcgagatcgaaaagaagcggatccaccccaccgagatcgcc
ttcaccgtcatcgaaatgctagaaaagcacttccccgagatcgtcgacagcaacttcacc
gcccggatggaagagaccctcgacaagatcgccgaaggcaaagaggattggcaaaaggta
ctctgggaattttatcaacccttcatcgagaagattgccgaaggcaaaaagaacatcccc
tcccaaaaaatggccgaacccatcggcgaaaaatgccccgagtgcggtgcagaactgctc
aaacgcaaggggcgctacggggagttcatcgcctgctccaacttccccaaatgccgctac
agccgcaacatcgacggcaccgaacccgaaaagccggaggagaccgacgagatctgcgac
aaatgcggcgcaccgatggtgatcaaaaactcccgccggggcaaattcctcgcctgcagc
gcctaccccaagtgcaaaaacgccaaacccctcaccccgcccaaagagctcgccgtcccc
tgccccgagtgcggcggcaaactcatcgaacgccagggccgccgcggcaccttctacggc
tgcgccaactaccccaaatgcaaattcatcgccaatttcgaaccggtggacaaaaaatgc
cccgaatgcggctacctgatgggggtcaaacacctcaaaagcggcgatgtctatgtctgc
ttcaagtgcaaacacaaagtttcggcggaagccgaaacttaa
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