Niabella soli: NIASO_00540
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Entry
NIASO_00540 CDS
T03682
Name
(GenBank) glycan metabolism protein RagB
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
nso
Niabella soli
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nso02000
]
NIASO_00540
Transporters [BR:
nso02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NIASO_00540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
AHF14092
UniProt:
W0ETK3
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All DBs
Position
123285..125024
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AA seq
579 aa
AA seq
DB search
MNKIYRYILFSIVIFSAGSCKKFLEVTPQGAITEANVSTPDKVDGLVLAAYAWLPHEGTI
NARMSPWLADIKSDDSYKGGGGIGDQLPWYQWEVFSLNNAATGNNDGIWYAEYEGVSRCN
HALTALNSLKESDYPLKQQRIAEMRFLRGYFFLDLKRWYKWIPYFDETVSVDDIKKVPNR
PDGATNDLAIWQNIYNDFDAAAKGLPEKQDEVGRATKYAAQALMLECKMWMAYEQDVNNK
VVNINKETLTQALTIADGIINSGKYSLAPDYAINFLFDFDNKSPESIFEWQYSHSDGTPN
GNLNAGTPLNAPWWPPNFSCCDFHKASYNLVNAFKTDANGIPEFDDFNNQEITNKAAYFA
SSKWDPRIGHTVAIPGLPWKYQQNLLYDSSGSRDPANYGYFNSLKENVESNSPGLVNLFW
MWNSKNEIAIRYDRILLQKAEILIRLGREAEALPIINSIRQRAANSTGRLKFANGASTLS
YNISLYQNGVNCNWTNDFAWKALMFENRLEFAMEGTRWYDLVRWGIVAPTLNAYFAKELP
RGRSWLKDGKFTTGRDEFMPIPQPQMNYSFGVYKQNPGY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagatctatcgttatatcctattttcaatagtgattttttcagcaggcagttgt
aaaaaatttttagaggtaaccccgcaaggcgcgattaccgaggccaatgtaagcacaccg
gataaggtggacggactggtgttggcagcctacgcctggctgccgcatgagggcaccatc
aatgcccggatgagcccctggctggccgatattaaatcggatgactcttataaaggtggc
ggcggtattggcgatcagctaccctggtaccaatgggaggttttctcattaaacaatgcc
gccaccggcaataatgatggtatctggtacgctgaatacgaaggcgtttcacgctgtaat
catgccttaaccgcgctcaacagccttaaagaatcggactatcctttaaagcaacaaaga
attgccgagatgcgttttttacggggttattttttcctggatctgaagcgctggtataag
tggatcccttattttgatgaaaccgtttcggtagatgatattaagaaagtgcctaaccgg
ccggatggggctaccaatgaccttgccatctggcaaaatatttacaacgattttgatgcg
gcggccaaaggcctgcccgaaaaacaggatgaagtggggcgcgctaccaaatatgcagca
caggcattgatgctggaatgtaagatgtggatggcctatgaacaggatgtaaacaataag
gtcgtgaacatcaacaaagaaaccctgacgcaggcgctgaccattgccgatgggatcatc
aacagcggcaaatacagcctggcgccggattatgccatcaatttcctttttgattttgat
aataaatcgcccgaatctattttcgaatggcaatattcacatagtgacggtacgcccaat
ggtaatttaaatgccggcacaccgctgaacgcaccctggtggccgcctaatttcagttgc
tgcgattttcataaagcatcttataacctggtgaatgcctttaaaacagatgcgaatggc
atccccgagtttgatgactttaacaaccaggaaattactaataaagcggcctatttcgcc
agtagtaaatgggatccgcgtattggtcataccgtagcgatacccggcctgccctggaaa
tatcagcagaatttgttgtacgacagcagcggctcacgggatccggctaactatggttat
tttaactctcttaaagaaaatgtggaatccaactctcccggtcttgtaaacctgttctgg
atgtggaattccaagaatgaaatcgctataagatatgacaggatcctgcttcaaaaagcc
gaaatactgatccggctgggacgggaagcagaagcattgcccatcatcaattcgatccgg
caacgcgcagctaacagtaccgggagattgaaatttgccaacggggcgtccacactatct
tataatatcagtttatatcaaaatggtgtaaattgtaactggacgaatgattttgcgtgg
aaggcgctgatgtttgaaaaccggctggagtttgcaatggaaggaacaagatggtatgat
ctggttcggtggggtatagtggccccaacgctgaatgcctattttgccaaggaattaccc
cgcggcagatcctggttgaaggatggtaaatttacaaccggacgcgatgagtttatgccc
ataccgcaaccccagatgaattattcttttggcgtgtataagcaaaatcccggctattaa
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