KEGG   Niabella soli: NIASO_02455Help
Entry
NIASO_02455       CDS       T03682                                 

Definition
(GenBank) DNA ligase D
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
nso  Niabella soli
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:nso00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    NIASO_02455
Enzymes [BR:nso01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NIASO_02455
DNA repair and recombination proteins [BR:nso03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     NIASO_02455
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(548869..551406)
Genome map
AA seq 845 aa AA seqDB search
MPLKKYNTKRDFSQTAEPRGIKKTGGRKLHFVVQRHDATRLHYDFRLEMAGVLKSWAVPK
GPSLNPADKRLAVMVEDHPYAYRKFEGTIPKGNYGAGNVEIWDEGTYTALEQQPGKNDEA
VLLQELKNGSLKFVLHGKKLNGEFALVRMKNATEDNAWLLIKHKDAFAVNGAYDAERSPR
KQAARTVKASSNIPAPKKQPAPQGPLVKKKATPLPVSTEKKHRHYIKPMLATIADKPFTD
KDWVFEIKWDGYRAIAETGKKLRLYSRNGLNFANRYGVLAQALAQQQHEMILDGEIVAYN
KEGMPDFQTLQHFEEAPDMPLTYQVFDLLHLNGHSTEALPLLQRKELLKEALNENAVIKY
CDHVVKDGEKFFRAIQKKNLEGMIAKSATSVYAEGIRTTSWLKIKHHHTEEVVIAGYTAP
RGSRKKFGALILGRYDEGKLVYAGHTGTGFDERSLTELYEKMQPLVTERSPFAHTPQTNM
PAVWLRPSLVCNIKFSQLTKDHIFRQPVFQGLREDKAATEIVIPKNEVVMADKKTAQPGS
PAQNEYNIKEGRKTIKLTNQHKIYWPEDGFTKGDLIAYYNVTAPVILPYLKDRPESLNRY
PNGITGESFYQKDAGDAVPEWIKTIQIYSESTKKEIDYIICNDRAALLYLANLGCIELNP
WNSTAKKPDTPTYMIIDIDPSKDNTFDQVIDAALATKQILDDCGAPAFCKTSGATGLHIY
VPLGNKYTYEQVKDFAHLVALHVTELLPDSTTLERNLKKRGTQKIYIDHLQNRRGQTVAS
AYSVRPRPGATVSAPLHWKEVKPGLMPQQFTLQTMQHRLAKTGDLFAPVLGKGIDMLKCL
KKISG
NT seq 2538 nt NT seq  +upstreamnt  +downstreamnt
atgccgctaaaaaaatataataccaaaagggatttttcccaaaccgccgaacccagagga
ataaaaaaaaccgggggcaggaaactgcattttgtagtacagcgtcatgatgccacccgg
ctgcattacgatttccggctggaaatggctggtgtgcttaaaagctgggccgtacccaaa
ggaccttccctgaatccggccgacaaaaggttggcggtaatggttgaagaccacccgtat
gcctaccggaaatttgaaggcactattccaaagggtaattatggcgcaggaaacgttgaa
atatgggacgaaggaacttataccgcgctggagcagcaaccggggaaaaatgatgaggcg
gttttattgcaggagcttaaaaacgggtccctgaaattcgttctgcatgggaaaaaatta
aacggggaatttgcgttggtccgcatgaaaaacgcgacggaagacaacgcctggctattg
ataaagcataaggatgcctttgccgttaacggagcgtacgacgcggagcgttcgcccaga
aaacaggcggccagaacagtaaaagcaagcagcaatattccggccccaaaaaaacaacca
gcaccacaagggccgctcgtaaaaaaaaaagcaacgcccctacccgtctccactgagaaa
aaacaccgccattatataaaacctatgttggcgaccattgcagataaaccctttacagat
aaagattgggtatttgaaattaaatgggatggctaccgggcgatagccgaaacaggtaaa
aaactcaggctttactcgcgcaacggtctcaactttgccaaccggtacggagtactggca
caggccctggcgcaacagcaacatgaaatgatattagatggagaaattgttgcctacaac
aaagaaggaatgcccgattttcaaaccttgcagcattttgaagaagcaccggatatgccg
ctaacctaccaggtatttgatctgctacacctcaacgggcatagtacagaagcgctgccg
ctcctgcaacgcaaggagctgcttaaagaggcccttaacgaaaatgccgtcattaagtat
tgcgatcatgtggtaaaagacggtgaaaaattcttcagggccattcaaaagaaaaacctg
gaaggaatgatcgccaagagcgcaaccagcgtttacgcggagggaataagaactacttcc
tggctaaaaataaaacaccatcataccgaggaagttgttattgcgggttatacggccccc
aggggctcccggaaaaaattcggagccttaattctcggcagatatgacgaggggaaactg
gtgtatgccggtcacaccggaacaggttttgacgagcgatcgctaaccgaattatatgaa
aaaatgcagccgctggtaacggagcggtcgccgtttgcccacactccccaaaccaatatg
cccgctgtatggctgcgccccagcctggtctgcaacattaaattttcccaactgaccaaa
gatcatatcttcaggcaaccggtcttccaggggctcagagaagacaaagcggcaacagaa
attgtcatccctaaaaacgaagtagttatggcggataaaaaaacggcgcagcccgggtca
ccggcacaaaacgaatataacattaaagaaggccggaaaacgataaagctcactaaccag
cataaaatttactggcccgaagatggttttacaaaaggcgatcttatcgcttattacaat
gtaacagcgcccgttatactgccttatcttaaagacaggcccgaaagcctgaaccgttat
cccaacggcatcaccggcgaaagtttttatcagaaagatgcgggggatgctgttccggag
tggatcaaaaccattcagatctactctgaaagcacaaaaaaagagatcgattatattata
tgtaatgaccgggctgcgctcctgtaccttgccaacctcggctgtatagaattaaacccc
tggaacagcacggcaaaaaaaccggatactcccacttatatgatcattgatatcgaccct
tcaaaagataatacctttgaccaggttattgatgccgcacttgccactaaacaaatttta
gatgattgcggagcgccggccttttgcaaaacatccggagccaccggtctgcatatatat
gtaccgctgggcaataagtatacttatgaacaggtgaaagactttgcgcatctggttgct
ttgcatgtaaccgaactactaccggatagtacaacccttgaacggaatcttaagaaaaga
ggtacgcaaaaaatatatatcgaccatcttcaaaaccggagagggcaaaccgttgcaagc
gcttacagcgtgcggccccggccgggagcaacggtatcggcccctttacactggaaggag
gtaaagcccgggcttatgccgcagcaatttaccctacaaaccatgcagcaccggctcgct
aaaacgggcgatctgtttgccccggtactgggcaagggcatcgatatgctcaaatgcctt
aaaaagatcagcggataa

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