Nicotiana tabacum (common tobacco): 107805182
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Entry
107805182 CDS
T04643
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107805182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nta03036
]
107805182
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
107805182
SWR1 complex
107805182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
107805182
NCBI-ProteinID:
XP_016484662
UniProt:
A0A1S4B740
LinkDB
All DBs
Position
Un
AA seq
1693 aa
AA seq
DB search
MASKGYKSKPDHEIRVRRPKGLEAPKEPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVAIRASKGMLDQATRGEKRVKEEEQRLRKVALNISKDIKKFWLKIEKLVLYKHQLELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVSSPTTSKRINSLSAPEALRTQCKEGSEGDV
KNRVGENLQSHSTGSDIDDDFDVQSEDEMAITLWGRQSFQTFNFLKQLXHTIEEDEAVIT
KEEREEELAALQNEMDLPLEELLKHYAVGEASRDCSPEKSGTDITVSSGEDSDKCRDDDI
AIETNGGCLPAISGRRSVESNGVLSVPNNQYPDLGQNKLKNPPKKYQELDKVNLLGVFNE
EQDDDDYVLAVGEDKEYNMDDETTMSEEEELAKAEPNDSADEIALLQKESELPLDELLAR
YKEDYDTDENVGDDSESYASASTAQNESELSQVNDGPSDVLPTTVTETEEREVESMDKTG
EERQSEDFSGSPAKNESEPNQVNDGPSDLLPTTVTETEEREVGSMAKTGEERKSEDFSES
PAKNESEPSQVNDGPSDVLPTTVTEIEEKEVGSMDKTGEERQSDDIIADAAAAARSAQPT
GNTFSTTKVRTKFPFLLKFPLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALL
AHLACEKGIWGPHLIVVPTSVMLNWETEFLRWCPAFKILTYFGSAKERKIKRQGWLKPNS
FHMCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTP
LQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFI
LRRLKRDVEKQLPSKHEHVIYCKLSRRQRNLYEDFIASSETQATLASTNFFGMISVIMQL
RKVCNHPDLFEGRPIVSSFDMSGIDMHLSSSICSMLSHGVFSTVNLGALGLLFTHLDFSM
TSWESHDVQSIATPSSLIEGRVSQIYGEETSLVLRRNKKFHGTNIFEEIQKALAEERLRE
AKERAASIAWWNSIKCKRKPVYSTSLREIVTVKHPVHGIYCQKSNPLSYLYSSRLAELIL
SPVERFQKMVDQVETFMFAIPAARSPAPACWCSKPGTSVFFSPTFKERSSKVLSPLLTPF
RPAIVRRQVYFPDRRLIQFDCGKLQELAGLLRRLKSEGHRALIFTQMTKMLDVLEAFINL
YGYTYMRLDGSTLPEQRQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWN
PAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQGGSYNTEFF
KKLDPMELFSGHRALSLKNIEGQKNSNDTEVQLSNADVEAALQNVEDEADYMALKKVEQE
EAVDNQEFTEEAIGRLEDDELGNDDEMKADEPADHEVPVTTSSKELVVMSNASNLLKEQA
ITFAGKDDDIDMLADVKQMAAAAAAAGQAILSFESQLCPIDWYAVRFLELWDPIIDKTAI
ESQGHFEETEWELDRIEKLKEDMEAEIDDDEEPLVYERWDADFATEVYRQQVEALAQHQL
MEELEAEAKEKELAEYENLMGWSASNSECYEWVERSRTMMRRSTMSKKIVEWICFSLQEA
SKDQNRVVTRWKISEQDSEHFCTRKFNEHGRYMSILSLNGGGRSVLIIPEPVFNAGWNEV
AFKINNFIKYSKK
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaagggtataagtctaagccggaccatgaaatacgtgttcgacgtccaaag
ggtcttgaagcacctaaagaacctcgacgacctaaaacacactgggatcatgttctggaa
gagatggtctggttgtcaaaggactttgaatcagagagaaagtggaagttggctcaggca
aagaaggttgctatacgagctagcaagggaatgcttgatcaggcgacacggggagaaaag
cgagttaaggaagaagagcaacgtttgcgaaaagttgcactcaatatctcaaaggacatc
aaaaagttctggttaaaaatagagaagctggttctttacaagcatcaattggagctggat
gagaagaagaagaaagcacttgacaagcagctagagttccttcttggacaaacagaaagg
tactcaacaatgcttgcagagaaccttgtaagttcaccaactaccagcaaacgaatcaat
tctttgtctgcaccagaagccttgagaactcaatgtaaagaagggagtgaaggggatgta
aagaatcgtgttggagaaaatcttcaatctcattcgactggtagtgatattgatgacgat
tttgatgtgcagtctgaagacgaaatggcaataactttatgggggcgccagtcgtttcag
acctttaatttcttgaagcagttgnagcataccattgaagaagatgaggctgttataact
aaagaagaaagggaagaagagttagctgctttacaaaatgaaatggatctacctcttgag
gagcttcttaagcattatgcagttggggaagctagcagagattgtagcccagagaagagt
ggtacagatattacagtcagttctggcgaggacagtgataaatgtagagatgatgatatt
gctattgaaaccaacgggggctgcttgcctgcaatttctggtcgtcgttctgttgaaagt
aatggcgtcttatcagtaccaaataaccagtatcctgacctagggcaaaacaagctaaaa
aatcctccgaagaagtatcaagagttagataaagttaatttgttaggtgtctttaatgaa
gaacaggatgatgatgattatgtccttgctgttggtgaagataaagaatataatatggat
gatgaaacaactatgtcagaggaggaagaattggcaaaggcagagccaaatgattctgca
gatgagattgcactgttgcagaaggagagcgaacttcctttagatgagctccttgctagg
tataaagaggattatgatactgatgaaaatgtgggggacgattctgaatcatatgcgtct
gcttcaacagcacaaaatgaatctgaactgagtcaagtaaatgatggaccgagcgatgta
ctgcccactacagtcactgagacagaagaaagggaagttgaaagcatggataaaacaggg
gaagaaaggcagagtgaggatttttcgggatcgccagcaaaaaatgaatctgaacccaat
caagtaaatgatggaccgagcgatttactgcccactacagtcactgagacagaagaaagg
gaagttggaagcatggctaaaacaggggaagaaaggaagagtgaggatttttcagaatcg
ccagcaaaaaatgaatctgaacccagtcaagtaaatgatggaccaagcgatgtactgccc
actacagtcactgagatagaagaaaaggaagttggaagcatggataaaacaggggaagaa
aggcagagtgatgatataattgctgatgcagcagctgctgccagatcagcacaaccaacg
ggtaacaccttctcaacaaccaaagtgcggactaagtttcccttccttctaaaatttccc
cttcgtgagtatcaacatattggtttggactggcttgtaaccatgtatgagaagaaactt
aatgggatcctagcagatgaaatgggtttggggaagactatcatgacaattgctcttctt
gctcacctagcatgtgaaaaaggaatatggggtcctcatcttattgttgtcccaactagt
gtcatgctaaactgggagactgagtttcttagatggtgtcctgctttcaaaattttgaca
tattttggcagtgcaaaagagcgaaagattaaaaggcaaggttggttgaagccaaactcg
tttcatatgtgtatcacaacttacagacttgttatacaggactccaaagttttcaagcgt
aagaagtggaagtacttgattttagatgaagctcatctaataaagaattggaaatcgcaa
agatggcaaacacttctcaattttaactcaaaacggcgtattcttttgactggtacacca
ttgcagaatgatctcatggagctgtggtctctaatgcatttcttgatgccacatattttt
caatctcaccaggaattcaaagattggttctgtaatcctatatctggaatggttgaggga
caagaaaaggttaataaggaagttgttgatcgcttgcataatgtccttcgtccctttatt
ctccgccggttgaagagggatgtggagaagcagcttccttcaaaacatgagcacgtcatt
tattgtaagctatcaaggaggcagcgtaacttgtatgaagactttattgccagttcggag
acacaagctactcttgctagtacaaatttttttggcatgataagtgttataatgcaactt
cgcaaagtgtgcaatcaccctgatttatttgaagggcgtccaatagtgagctcctttgat
atgagtggtattgatatgcacttgagctcttccatttgctcgatgctgtctcatggtgtc
ttttcaactgtcaaccttggggctttggggttgttgtttacacatcttgatttttcaatg
acctcttgggagagtcatgatgttcaatccattgcgaccccttcaagcttgattgagggt
cgtgtgtctcaaatttatggtgaagaaacttcactagtacttagacggaataagaagttt
catgggacaaacatatttgaagagatccaaaaggcacttgctgaggagaggctaagagaa
gcaaaggagagagcggcatctattgcatggtggaattccatcaagtgtaagcggaaacct
gtatattcaacaagtcttcgggagattgtcactgtgaaacatcctgttcacggtatttac
tgtcagaaaagtaatcccttgtcatacctgtactcctctaggcttgcagaattgatactg
tcgccagttgagagattccaaaaaatggttgatcaggttgaaactttcatgtttgcaatc
cctgctgcacgttccccagcacctgcttgctggtgcagtaaaccaggtacttccgtattt
ttcagtccaacctttaaggagagatcttctaaggttctctctccgcttctcactcctttt
cgcccagccattgttagaaggcaagtctactttccagataggcggctcatacaatttgac
tgtggaaagctgcaggagcttgcaggtttgttgagacgactaaaatcagaaggtcaccgt
gcactaattttcacccaaatgacaaagatgcttgatgttttagaagctttcattaatttg
tatggttacacttacatgcgtctggatggttctactctgcccgaacagagacaaactttg
atgcaacggttcaacacaaatccaaagattttcctttttattttatcaacccgtagtggt
ggagttggcatcaacttggtgggggcagacacagtcatcttttatgatagcgactggaat
ccagctatggatcaacaagctcaagatcgctgtcatagaataggccagacccgtgaagta
catatttatcgattgataagtgagagtaccattgaagagaatattttgaaaaaagcaaac
cagaagcgagctctggatgatttggttatacagggtggaagttacaacactgaattcttc
aagaaactggatccaatggaattgttctcgggccacagagcactttccttaaagaacatt
gaaggacagaagaatagcaatgatactgaggttcagctctctaatgctgatgtggaggct
gctctgcaaaatgtagaagatgaagcggattacatggctctgaagaaagttgaacaggaa
gaggcagtagacaatcaggagttcactgaagaagcaattggtaggttggaagatgatgaa
cttggtaatgatgatgagatgaaggctgatgagcctgctgatcatgaagtcccggttaca
acatcaagcaaagaacttgtggttatgtcaaatgctagtaatttattaaaagaacaagca
attacttttgctggtaaagacgatgacattgacatgttggccgatgtcaaacagatggca
gcagctgctgctgctgcaggacaagctatcttgtcttttgagagtcagttatgtccaatt
gattggtatgctgtacgttttctggagttatgggaccctatcatagacaagacagctatt
gagtcacaaggtcattttgaagaaactgaatgggaattggatagaattgagaaattgaag
gaagatatggaagcagagattgatgatgatgaagaacctttagtttacgaaagatgggat
gctgattttgcaactgaggtatacagacagcaggttgaggctttggctcaacatcagttg
atggaggaactggaagctgaagctaaagagaaggagcttgcagaatatgagaacttgatg
gggtggtctgctagcaactcagagtgttacgaatgggttgagagaagtcgcacgatgatg
aggagatcgaccatgagcaaaaagatcgtggaatggatttgcttctcacttcaagaggcc
tcaaaggaccaaaatagagtggtcacgagatggaaaatttcagagcaggactcggagcac
ttttgcaccaggaaatttaacgagcatgggagatacatgagtattctgtcattaaatggt
ggagggagatcagtacttattattcctgaaccagtctttaatgcaggttggaatgaggta
gcatttaagatcaacaacttcattaaatactcaaaaaagtag
DBGET
integrated database retrieval system
