Nicotiana tomentosiformis: 104114092
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Entry
104114092 CDS
T05025
Name
(RefSeq) splicing factor, suppressor of white-apricot homolog isoform X1
Organism
nto
Nicotiana tomentosiformis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
DRY_EERY
Motif
Other DBs
NCBI-GeneID:
104114092
NCBI-ProteinID:
XP_009622750
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MDLEVVGRHALLFDDDAMAAFVNSGDALVEWNSLQIDRYDVRHLLSAPPPSRRRSHSSTS
SNLVDASIQFELDHERYLDLPSPSDEPEMEEDEKSVDAGAYRAVGFSYGPTDDSADRKSS
EVGQESSEFRPSFPVPESLLQCLPPTEKVHQIIARTALFVSKHGGQSEIVLRVKQGDNPT
FGFLMPDHDLHAYFRFLVDHPELLQSGSDVKAQNEGGKDSNEQKEHDGRGGALSLLGSVY
ESGEDEELANGDDPGSKVTSATLDTLSATNVSSPLERADGSKEFEKDEKEKNERVSTNSF
RSIKDKEKAAALKKNNLINASKSGIRTSMQKEDDGGSSAASRKTNAEVSGLGAVSKTGPL
VEPPSDLKKLINKIVEFILKNGKQFESTLMEQDSKHGRFPFLLPTNQYHPYYLKILQKAQ
ESKVHGSEKRALKESDSPSRSAGYDLPYVSDKKEKFKMVIGKSKKEMQDSLTKTSEQEVG
VNVDAAAAAAILHAATRGIKNPNLNIISGSSKNGDSQGHSSEGGQASSFLNVPPFSQRSD
QRMKNSVSIPKAKEIAKSAAAEAASEADSSEAHLSKEQKLKAERLRRAKMFVALIKGGAA
PVKRDSSHGGSVEPQESALSGSGTEVNAATGEREGSAAPSELTALGREGSAALSELTALE
REGSAAPLINNASNENEKSEIKHNAEENERRSRRKYRSRSDRPEEEDEEEEGEEEQRSRK
KHRSSREDEEEESGDVRDDRRSKKKKHSRRHRHKDGGNAYEDEDDEDKRSRKKHRRRHSS
PEYDSDEDDKRSRKKHRRRHSSPEYDSDEDDKRSRKKHRRRHSSPEYDSDEDDKRSRKKH
RRRHSSPEYDSDEDDKRSRKKHRRRHSSPEYDSDEDDKRSRKKHRRRHSSPEYDSDEDDK
RSRKKHRRRHSSPEYDSDEDDKRSRKKHRRRHSSPEYDDDDDDERRDAERHHKHGRKKHS
SHRPSRENKKDDYEEDYNHSKKKDRSHRTSHRSRDRRKHMIKHSSDDESEHEHKRPNSSD
NEKQHYGRADKIVKGTKEREELAKEREELEEGEIGTKVSDQSRGSLRGSVSREASVDVSS
SHQRAASQHSESTEISDDLRAKIRAMLMATRK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggatctagaggtggtgggccgccatgccctcctcttcgacgacgacgccatggcggcg
ttcgtcaactccggcgacgctcttgtcgaatggaactctctccaaattgatcgttatgat
gtccgccaccttctctccgcacctccaccttcccgccggcggtctcactcttctacgtct
tcgaatctcgtcgatgcttcgattcagttcgagctcgatcatgaacgttacctcgatctt
ccttcgccttcagatgaaccagaaatggaagaagacgaaaagtcggtggatgctggtgct
tatcgtgctgttggtttctcatatggacctactgatgattctgctgacagaaaaagttct
gaggtgggccaggaaagctctgagtttcgtccctcctttccagtgccggaaagcctactt
caatgcttgccaccaacggaaaaggtacatcagataattgcaaggactgcactgtttgtg
agcaaacatggtgggcagtcagaaattgttctgagggtaaagcagggagacaatccaaca
tttgggttcttaatgcctgaccacgatcttcatgcatactttaggtttcttgttgatcac
cctgaacttttacaatctggtagtgatgtgaaagctcaaaatgaaggaggaaaggattcc
aatgagcagaaggaacatgatggtcgtggtggtgctttatctttgcttggttctgtatat
gagtccggagaggacgaggagcttgcgaatggggatgatcctggatccaaagttaccagt
gcaacacttgataccttgagtgccacaaatgtttccagtcctcttgaaagggctgatggt
tccaaggaatttgaaaaagatgagaaagaaaaaaacgagagagtttctacaaattcattt
cgttctattaaagataaagaaaaggctgctgcactgaaaaagaataatttgattaatgct
tccaaaagcggaattagaactagcatgcagaaggaagatgacggtggttcttctgctgca
tctagaaagacaaatgcagaggtgtctggtctaggagcggtgtcgaagactggacctttg
gtggagcctccatctgatctgaagaaattgattaataagattgtggagttcattctgaag
aatgggaagcagtttgagtcaactcttatggaacaggacagcaaacatggcagattccca
tttctccttccaaccaaccaatatcatccttactatctaaaaatactccagaaagctcaa
gagtcaaaagtccatggatcagaaaaaagagctttgaaggaaagtgattctccctccagg
tctgcagggtatgatctgccatatgtatctgataagaaagagaagtttaaaatggtgatt
ggtaaatccaagaaggaaatgcaggactccctgaccaaaacttcagagcaagaggttgga
gtcaatgtggacgctgctgctgctgccgctatccttcacgcagccactagaggtatcaag
aatcccaatttgaatatcatctcaggctcatctaagaatggtgatagtcagggtcacagc
agtgagggtggccaagcctcaagtttcctcaatgtccctccatttagtcagaggtctgac
cagaggatgaaaaatagtgtttcgattccaaaggcgaaggaaatcgcgaagtctgctgct
gcagaagctgcgagtgaggcagactcctctgaagcacacttgagcaaagagcagaagctg
aaagcagagaggctgagaagggcaaagatgtttgtggccctgataaaaggtggagcagct
cctgtgaaaagagattcttcacatggagggtcagtggaaccacaggaatctgccttgtca
ggttccggcacagaggttaatgctgctactggagaaagagaaggcagtgcagcaccgtca
gaattgactgctctagggagagaaggcagtgcagctctgtcagaactgactgctctagag
agagaaggcagtgcagctccattaattaataatgcgtcgaatgaaaatgagaaatctgaa
ataaaacataatgctgaagagaatgagcggcgatcaagaaggaaataccggtcaagatct
gatagacccgaagaggaggatgaagaggaagagggagaggaggagcagcggtccagaaag
aagcaccgctcttcaagagaagatgaagaggaagaaagtggagatgtaagggatgatcga
cgatccaaaaaaaagaagcattcacgacgtcatagacacaaagatggtggcaatgcatat
gaggatgaagatgatgaagataaacgatcaagaaagaagcaccgcagacggcattcctct
cctgaatatgatagtgatgaagatgataaacgatcaagaaagaagcaccgcagacggcat
tcctctcctgaatatgatagtgatgaagatgataaacgatcaagaaagaagcaccgcaga
cggcattcctctcctgaatatgatagtgatgaagatgataaacgatcaagaaagaagcac
cgcagacggcattcctctcctgaatatgatagtgatgaagatgataaacgatcaagaaag
aagcaccgcagacggcattcctctcctgaatatgatagtgatgaagatgataaacgatca
agaaagaagcaccgcagacggcattcctctcctgaatatgatagtgatgaagatgataaa
cgatcaagaaagaagcaccgcagacggcattcctctcctgaatatgatagtgatgaagat
gataaacgatcaagaaagaagcaccgcagacggcattcctcccctgaatatgatgatgat
gatgatgatgagcgaagagatgctgagagacatcataagcatggaaggaaaaagcattca
agtcatcggccttcacgtgaaaataagaaagatgattatgaagaggattataatcattcc
aagaagaaagatagatctcatagaacctcccaccggagtagagatagacgcaaacacatg
ataaagcattccagtgatgatgagtctgaacatgagcataagcgcccaaactcttcagat
aatgaaaagcagcactatggcagggccgataagattgtaaaggggaccaaagaaagagaa
gaactggccaaagaaagagaagaactggaagagggtgagatcggtaccaaagtgtcagat
caatcaagaggaagtctgcgaggttccgtcagcagagaagcttcagtggatgtatctagt
tcccatcaaagagccgcatctcagcattctgaatctactgagatatcagatgatcttagg
gccaaaatccgtgcaatgttaatggcaactaggaagtag
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