Ornithorhynchus anatinus (platypus): 100074997
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Entry
100074997 CDS
T01045
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain isoform X1
KO
K24357
collagen type XX alpha
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100074997 (COL20A1)
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Interfer-bind
VWA_3
NDNF
DUF2529
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
100074997
NCBI-ProteinID:
XP_028927045
Ensembl:
ENSOANG00000003728
LinkDB
All DBs
Position
8:18627026..18706175
Genome browser
AA seq
1473 aa
AA seq
DB search
MMKVGSGFLYVCITVLNLVLEQVHGQGTHRLKLTVLSEDRLQMKWKETEGNTNGYKVQVK
PMAGDSEQEVMLTTKTPKATVGGLSPTKEYTLQIYVLNGSQDTLFARRKFVIEDLKSSSL
ARSNRRIAGASAEPKSSPGGSPESAQSPEPEATSPSPGRDSLIPGLSNSERDRPERKRQR
PLGGKSTSKSSSTLNATEGTSAPPRQSTDKLELEMPDRDHQAQDTLKRGSHFQCNSSAPV
DIIFLVDGSWSIGRSNFRLVREFLASLISPFNIARDKISIGLSQYSGDPRTEWDLNKFAS
KDKVLEAVRNLRYKGGNTFTGLALTHVLEQNLKLEAGPRPEADKIVILLTDGKSQDEANA
AAQALKDLGISIFAIGVKNADEAELRQVASHPLDITVHNVLDFPLLSSLADPLSRILCKK
IKERSKSGQSGGSANVDSASGALSPGPTNLIISEVTSKTFRLSWTPPLQPVEKYRIVYYP
SVEGVLSEVTVDGSASSVMLVNLTSHTEYLVSVFPVYESSVGDGLRGVTATLPLSPPRSL
RVTEVTHHSIKVSWQPTDETTEYLVLCTLTSNSEEEEDGKEVKVEQTEVLLEGLRPGTEY
TVAVYALDGEEASEPQSILETTLGLIPTRYLTFSEVSHNSVRVHWEQPSRAVRVFQVSYI
SREGSNAGEVEVPGSNLSAWLVPLSSSTEYIISVTAIYSDGDSSVLTDHVTTRKVPAPYP
LRVIELPGDDVRLEWGHAAIADVVVYQIKWTPLGEGKAHEISVPGNLDAAVLPGLEKHME
YQISILAYYRDGARSDTVSLRFSPLSRSPPSNLVIESETPNSLQVVWKPPDGHVLYYKVA
YAPASGTSMEKTVNVSATSNHIKLPLLLPATKYKVMISAIYATGESDAVATTGRTALSLA
KLPPARGFAPIRMEAACPALHADGALQGFDMMEAFGLVEKEYSSIKGVSMEPSIFSGTRI
YTLFRDIQLTRRTREIHPAELPPEHTITFLLRLLPEMPKERFAVWQITDEDFQPLIGVVL
DASRKSLTYFNHDYKAELQEVTFDQQEMKKIFFGSFHKVHVAVNRVRVKLFVDCKKIAEK
QISEAGSVSTAGFIMLGKLTKTRGPRSGSAAFQLQSLQIVCTSVWAEEDRCCDVPALRDK
ETCPAPIPECTCSSDSPGPPGSPGPPGSPGRRGAQGEQGTPGLKGEPGPPGQTGPEGPGG
QQGSPGSQGRTVQGPVGPPGNKGEKGEEGHQGMQGYPGHPGLPGRDGLQGPKGMRGLEGT
AGLPGPPGPRGFQGMAGAPGTNGQKGPPGDVGPTGLPGPKGERGEKGEPQSIATIYQLVS
QACEQMIQTHVLKFDSFLHENTRPPVPIWKKKLIPGEPGPPGLPGNPGRMGESGEVGVPG
EAGRDGYPGERGEPGVKGEKGSPGPLGHGPPGPHGKAGPAGEEALGKQGPQGSPGQIGSP
GIPGTRGRSGEPGLPGICDPSGCFIGSTEDFIP
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagtcggcagtggtttcttgtatgtctgcatcactgtgctgaatcttgtcctg
gaacaagtgcatggccaagggacccaccggctgaagctcacggtgctctcggaggatagg
ctccaaatgaagtggaaagaaactgaagggaacacaaatggctacaaagtacaagtgaaa
cccatggcaggtgattcagagcaggaagtgatgttgacgaccaaaacacccaaggctact
gtggggggactgagccccacaaaggaatacaccctccagatctatgtgctcaatggctct
caggacacactgtttgctagaaggaagtttgtgattgaggatttaaaaagcagctccttg
gctaggagtaatcggaggatagcaggggcatctgcagaaccaaaaagctctccgggggga
agcccagagtctgcccagagtcctgagcctgaagccacttctccatccccagggagggac
tccctgattccaggcctaagtaactcagagagagaccgaccagagaggaaacggcaaaga
cccctgggaggaaagtccaccagtaaatccagttcaacattaaatgccaccgaggggacc
tcagcaccaccgaggcagagcactgacaaactggagctggagatgccagacagagaccac
caggcccaggacactctgaagagaggttcccattttcagtgcaactcatctgcacccgtg
gatattatcttcctggtagatgggtcctggagcatcggccgcagtaacttcaggctggtc
agagaatttctagccagcctcatttctcctttcaacattgcccgggacaagatcagcata
ggcttgtcccagtacagtggagatccccgtactgaatgggatctgaacaaattcgccagc
aaggacaaggttcttgaggccgtgaggaatctccgctataaaggcggcaacacattcact
ggtctggcattaacacatgttctggaacaaaatctgaagctggaagccggtccccgacct
gaagctgataaaatagtgatccttctgacggacgggaaatcccaggatgaggccaatgct
gccgcccaggcgttgaaagacttgggcatcagtatctttgccattggtgtcaagaatgct
gatgaggctgagctgaggcaggtggcctctcaccctttggacatcactgtgcataatgtc
ctggattttcccctcctcagctccctggctgatccactcagcaggatcttatgcaaaaag
atcaaggaaagaagcaagagtggacaatcaggtggttcagctaacgtggactcagccagc
ggggcactgagccctggtcccaccaacctgattatatcagaagtgacatccaaaacgttc
aggctctcctggacccctcctctgcagccagttgaaaagtacaggattgtgtattatccc
tccgttgaaggggtcctctcagaggtaactgtggatgggtctgcttcctccgtcatgctg
gtcaacttaacctcgcacacagagtatctggtttcggtgttccccgtttatgagagttct
gttggagatggactgcgaggagttactgccacattgcccttgtctccccccaggtcccta
agagtgactgaggtgactcaccacagcatcaaagtgagttggcagcccacagatgaaact
actgagtatctggttctctgcaccttgacctctaattcggaggaggaggaagatgggaaa
gaggtgaaagtggagcagacggaggtcttgttggaaggcctgagacctggaacagagtac
acagttgctgtatatgcactggatggggaagaggccagtgagccccagagcattctagaa
acaaccttgggtttgattcctacccggtacctgacattctctgaggtcagccacaactct
gtcagagtccactgggagcagccctcaagagcggtcagagttttccaggtgtcctacatc
tcaagagaaggaagcaatgccggagaggtagaagtgcctggtagcaacttgtcagcgtgg
ttagtccctctctcctcctccactgagtacatcatcagtgtcacagccatctatagcgac
ggcgactcttcagtgctcactgaccatgtgacaacacgaaaggtcccagctccttaccca
ctgagggtgattgagctccctggggacgatgtcagactggagtggggacacgcagccatc
gctgacgtggttgtctatcagattaaatggactcctctgggagagggaaaagctcacgag
atttctgttcctggaaacttggatgctgctgttctgccagggttggaaaaacacatggag
tatcagatctccattttggcatattaccgagatggagctcgaagtgacacggtgtctctc
cgtttcagccccctttccaggagtcccccctccaatctggttatagagtcggagaccccc
aacagcctacaagtagtctggaaaccccccgatggccatgttctatactacaaagttgct
tatgccccagcttctggcaccagcatggagaagacggtgaatgtttctgctactagcaac
cacatcaagcttcctctgctcctccctgctaccaaatacaaggtgatgatttctgccatc
tacgcgacaggggagagcgatgcggtggccacgacgggacggactgctttatccctggct
aagctcccccctgctcgaggctttgctcccattaggatggaggcagcctgccccgctctt
catgctgacggcgctctacaaggatttgatatgatggaggcttttgggcttgtggagaag
gagtactcctccattaaaggggtatccatggagccttccatcttcagtggaactcggatc
tacactctcttcagagacatacagctcacccgccgaaccagggaaatccacccagcggaa
cttcctcctgaacacaccattaccttccttctccgtctccttcctgaaatgcccaaggag
cgttttgctgtgtggcagatcacggatgaagattttcaacccctcattggagttgtactt
gacgccagtaggaagtctctgacttatttcaatcatgactacaaggctgagttgcaggaa
gttacctttgaccaacaggaaatgaagaagatattctttgggagctttcataaggtacat
gtggctgtgaaccgggtcagagtcaagctctttgtagattgcaagaaaatcgctgagaag
cagatcagtgaggcaggaagtgtctccacagctggctttatcatgctggggaagctgacc
aagaccagaggcccaaggagtggatctgcagcgtttcagctccagtctttacagattgtg
tgcacttctgtctgggcagaagaagaccgatgttgtgatgttcctgcactgagagataaa
gaaacctgtcccgctcccattcctgaatgcacctgctcttctgattccccagggcctcca
ggatccccaggcccccctggcagtccagggaggagaggagctcaaggtgagcagggaaca
ccaggactcaaaggagagccaggcccacctggacagaccgggccagagggccctggaggg
cagcaggggtcaccgggatcccaaggcaggactgtacagggacctgtgggaccaccaggg
aacaagggtgaaaaaggtgaagaaggccaccaagggatgcagggttatcccggtcatcca
gggcttccagggagagatggccttcaaggtcccaagggcatgaggggattggaaggcaca
gctgggctccctggcccacccggccccaggggttttcaggggatggccggtgctccaggt
actaatggacagaagggaccccctggagacgttggcccaactggactgcctgggcccaag
ggagaaagaggagagaagggtgaacctcagtccatcgccactatttaccagctagtcagc
caagcctgtgaacagatgattcaaactcatgtactgaaatttgactcatttctccatgaa
aacaccaggccaccagtgcctatttggaagaagaaactgatacctggagaacccggaccc
cctggtctcccagggaaccctggcaggatgggggaaagtggagaagtcggtgtccctgga
gaggcagggcgggatgggtacccgggagaaagaggagaacctggagttaagggggagaaa
ggcagccctgggccactgggacatggaccacctggaccccatggaaaagctggtccggca
ggggaagaggcattgggaaagcagggaccacagggctctcctggtcagattggatcccca
gggatcccgggaactaggggacgatctggagaacctggtcttccaggaatctgtgatccc
tctggctgtttcatcgggagcacagaagattttatcccatga
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integrated database retrieval system
