Octadecabacter antarcticus: OAN307_c06790
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Entry
OAN307_c06790 CDS
T02538
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
oat
Octadecabacter antarcticus
Brite
KEGG Orthology (KO) [BR:
oat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oat03021
]
OAN307_c06790
Transcription machinery [BR:
oat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OAN307_c06790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
HTH_24
DUF134
Xre-like-HTH
I-TevI_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
AGI66406
UniProt:
M9R7X3
LinkDB
All DBs
Position
complement(649503..650039)
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AA seq
178 aa
AA seq
DB search
MTVSDEDMALAAQNGDGQAFASLIARQYDRLFRLCFRLTGSKHEAEDLTQDICAALPAKL
SSYKRQSKVTTWLYRVAVNAAHDRRRKQATYGRAANGWGDWELNRQAVIDETQTRTDWLT
TAMASLSPDLRDTLALVLDDMTHADAGNILGISEGTVSWRLSEARKHLKSLKEKEGVL
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcagtgatgaagatatggccttggcggcccaaaacggtgacgggcaggcattc
gccagcctgatcgcccgtcaatacgaccgcctgttccgtctctgtttccgcctgaccgga
tccaagcacgaggctgaagacctgacccaagacatctgcgccgccctgcccgcgaaatta
tcaagctacaaacggcaatcaaaagtcaccacatggctctaccgtgtcgctgtcaacgcc
gcccacgatcgccgccgcaaacaggcaacctatggacgcgcggcgaacggctggggcgac
tgggaactcaaccgccaagcagtgattgacgaaacccagacccgtactgattggttgacg
accgctatggcgtcgctctcccctgacctgcgtgacacgctggccctcgtgctcgatgac
atgacccacgccgacgcaggcaacatcttgggcatttcagaaggcaccgtgtcatggcgc
ctatccgaggcccgcaaacatctgaaatcacttaaggaaaaggagggcgtgttatga
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