KEGG   Octadecabacter antarcticus: OAN307_c43920
Entry
OAN307_c43920     CDS       T02538                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
oat  Octadecabacter antarcticus
Pathway
oat03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:oat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OAN307_c43920 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oat03021]
    OAN307_c43920 (rpoA)
   03400 DNA repair and recombination proteins [BR:oat03400]
    OAN307_c43920 (rpoA)
Enzymes [BR:oat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     OAN307_c43920 (rpoA)
Transcription machinery [BR:oat03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     OAN307_c43920 (rpoA)
DNA repair and recombination proteins [BR:oat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      OAN307_c43920 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 DUF211 Glyco_hydro_65C
Other DBs
NCBI-ProteinID: AGI69760
UniProt: M9RIV4
LinkDB
Position
complement(4328297..4329313)
AA seq 338 aa
MIHKNWAELIKPTQLDVQPGNDPSRQATVIAEPLERGFGLTLGNALRRILMSSLQGAAIT
AVQIDNVLHEFSSISGVREDVTDVVLNLKGVAIRMEVEGPKRLQVQAKGPGVVTAGDISE
SAGIEILNKDHVLCHLDEGAELYMELTVNTGNGYVAADKNKPEDAPIGMMAIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSITPDDAVAFAARILQDQLSIFVNFDEPESAQ
TASDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDSF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgatccacaaaaactgggctgaactgatcaagccgacacaattggacgtgcagccgggt
aatgacccgtcacgtcaggcgactgttatcgctgaaccgctagagcgtggcttcggcctc
acactcggcaacgctttgcgccgcatcttgatgagctcgcttcagggcgctgccatcacg
gctgttcagatcgacaacgttttgcacgaattctccagtatttctggtgttcgcgaagac
gtcaccgacgtggtcttgaacctcaaaggtgtcgcgatccgcatggaagtcgaaggcccg
aagcgtttgcaagtgcaagccaagggcccgggcgttgtcacggcaggcgacatttcggaa
tctgctggcatcgaaatcctcaacaaggaccacgtgttgtgccaccttgatgaaggcgct
gaattgtacatggaactgacggttaacactggcaacggctatgtggctgcagacaagaac
aagcccgaagatgcgcccatcggtatgatggccatcgacgcgatttattcgccggtcaaa
aaagtcagctatgacgtacagccgacccgtgaaggtcaggtgctcgactatgataagctg
acgatgaaagtcgaaacagacggatctatcacgccggacgacgccgtggcatttgctgcg
cgtatcctgcaggatcagttgtcgatcttcgtgaacttcgatgagcctgagtccgcacaa
accgcatctgatgatgacgggctggaattcaatccgcttttgttgaagaaggttgatgag
cttgagctttcggtgcgttccgcaaactgcctgaagaacgacaatattgtgtacatcggc
gatctcattcagaaaactgaagcagaaatgctgcgcacaccgaacttcggtcgcaagtcg
cttaacgagatcaaagaagtgctgtcaggcatgggcttgcacctgggcatggacgtcgag
gactggccaccggacaacattgaagatcttgcgaagaaattcgaagactctttctaa

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