KEGG   Oryza brachyantha (malo sina): 102708334Help
Entry
102708334         CDS       T02995                                 

Definition
(RefSeq) putative DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
obr  Oryza brachyantha (malo sina)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:obr00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    102708334
Enzymes [BR:obr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     102708334
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     102708334
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
4
AA seq 1310 aa AA seqDB search
MAATVRFGLLVAMLQAMSRDRTAAKKRGRLRALLDRAYGPSGRDDYFSALRLVLPGLDRE
RGSDGLKEAAPARGSYGLKEAALASVLVDALGIAKDSPDAVRLTNWRRGGSFRNAGNFAL
VAAEVLQRRQGMTSGGLTIKEVNDALDRLAATENRSEKASIISSLIKKTNALEMKWLLMI
ILKDLKLGISEKSVFHEFHPDAEDLFNVTCDLRLVCEKLNDRSQRHKRQDIEVGKAVRPQ
LAMRVSNASSAWKKLHGKQVVAECKFDGDRIQIHKNGEEIHFFSRSFLDHSEYAPGMSKV
IKEHVLVDRCILDGEMLVWDTVLNRFAEFGSNQEIAKAAREGLEMDRQLCYVAFDILYAG
DTSVIHQSLTERHEILRKVISPLKGHLEILVPTGGLNMHRPPDEPCWSIFVRNLDDVEKF
FKDTVDNREEGIVLKDLESKWEPSDRSGKWLKLKPDYIHAGADLDVIIIGGYYGSGRRGG
EVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEELDALITKLKPHFRKNEYPKKPPRF
YEVTNHSKERPDVWIESPDKSVIISITSDIRTIKSEVFAAPYNLRFPRIQRVRYDKPWNE
CLDIQAFVDIVHSSNETTHRAADDDSGLKNVKLKQPRTNKKGEKKNVSIIPSRLMKTDIS
GLKGETLIFANTMFYFVNIPPSYNLDYFHKLVVENGGSFSMNLNDSVTHCIAAEKKGIKY
QAATRQGRIIHYSWILDCCKEKCLLHLQPKYILFLVDFARHKFPEEIDSYADYFYWDIDI
SDLKQIFSNMDRAVVDSNMVHHYKKKYYTDERFFFFQGCCVYFYHAPLVNADYNVISDLA
LKRVKQDLTMHGGEVCSILAPATHLIIVSVLEAYNFDMLYKSFLPSERRYLHDKRLHVVS
NKWLEDSVEKQRKLPETTYSLKPDTLEEIEVERSEETVQPSNHKHEENEEIDRSHVNHVP
KKRGRPSSSTSRAAKLAPRPVRRTRPRKGNQHAKIDDVEPEESGHGETGQDDQIPDTDNI
SKMEQDGFDKDQVSPRPVQRSRARRGKRHAKIDYGGSEENDPGATGQDDQKFDADYISKI
EEDSNDRDQGSHPAAPRVLRRSMPQRGKRHAKIDYGESEESSPGETAQDDKLDADSIYRM
EEHNRDKYQEPPPGAQFITLDEQEAKGIKISTMETPSDRQHEINDAVVRTGTSEATSSAT
CAKMEQMVDPLHAMLLDMIPSLRQTKTEDSNRVPEAKAEKNPPWAGSSTPNYEFPVPEAT
SSGPNSSVPAPHAGSSTQSNGVPAPDPTAGAPKKKKVSYKDVAGELLKDW
NT seq 3933 nt NT seq  +upstreamnt  +downstreamnt
atggcggcgacggtgcggttcgggctgctggtggcgatgctccaggccatgtcgcgggac
cgcacggcggcgaagaagcggggccggctccgcgcgctcctcgaccgcgcctacgggccc
agcggcagggacgactacttcagcgcgctccgcctcgtgctcccggggctcgaccgggag
cgcggctcggacgggctcaaggaggccgctcctgcgcgcggctcgtacgggctcaaggag
gccgctctggcgtcagtcctcgtcgacgccctcgggatagcgaaggactcgcccgacgcc
gtccgcctcaccaactggcggcgcgggggcagcttccgcaacgccggcaacttcgcactc
gtcgccgccgaggtgctgcagcggagacaaggaatgacttctggaggattgacgataaaa
gaggtgaatgacgcacttgatcgccttgctgcaactgagaataggtctgagaaggcttcg
attatttctagtctgatcaagaaaaccaatgcccttgaaatgaagtggctcttgatgatt
attctgaaagatttgaaattggggatcagtgagaagagtgtgttccatgagtttcatcct
gatgctgaagacttgttcaatgtcacttgtgatctgaggttggtctgtgaaaagcttaac
gatcgaagtcagaggcataaacgtcaggatatagaagtggggaaggctgtcaggcctcag
ctagctatgagagtcagtaatgcctcatctgcttggaagaagcttcacggaaaacaagtg
gttgctgagtgcaaatttgatggtgaccgtattcaaattcacaagaatggggaggagatt
catttcttctcaaggagctttcttgatcactcggaatatgcacctggaatgtccaaagtt
atcaaggaacatgtcttggttgataggtgtattttggatggagaaatgcttgtttgggat
actgtgcttaaccggtttgcagaatttggttcaaatcaggagatagcaaaggctgcaagg
gaggggctggagatggatagacagttgtgctatgttgcttttgacattctttatgctgga
gacaccagtgttatccaccaaagtttgacagagcggcatgaaattctgcgtaaagtcatc
agtcctttgaagggccatctcgaaatattagttccaacaggtggtctgaacatgcatcgt
ccaccagatgaaccatgctggtccatctttgtgcgcaatcttgatgatgtggagaaattc
ttcaaggacactgttgataacagagaagagggaattgtattaaaggaccttgagtccaag
tgggaacccagtgaccggagtggaaagtggcttaaattaaagcctgattatatacatgct
ggtgctgatctggatgttattattataggtggatattatggctcaggacgtcgcggagga
gaggttgcccagtttttagtcggtcttgcagtgccttcagatgacaatagctatcccaaa
aggtttctttccttttgtcgagttggtactggtctttctgatgaagagcttgatgctctt
atcaccaaattgaagcctcatttcaggaaaaatgagtaccccaaaaaaccacccagattt
tacgaagtgacaaaccattcaaaggaaaggccagatgtttggatagaaagccctgataag
tcagtcataatatccataacaagtgatattcgaacaatcaaatctgaggtatttgctgcc
ccatacaacttaaggttcccgcgcattcaaagggtgagatatgataagccatggaatgag
tgccttgatattcaggcatttgtggacatagtacattcaagtaatgagacaactcacagg
gcagcagatgatgatagtggtctgaaaaatgttaagttaaaacagccgagaacaaacaaa
aagggggagaaaaagaatgtgtcaattatcccttcacgtcttatgaagactgacatttca
ggcctaaagggagaaacactaatatttgcaaacacaatgttctattttgtcaacattcct
ccatcatataatcttgactattttcataaactggttgtggagaatggcggatctttctcg
atgaatcttaatgactcagttactcattgcatagcagcagagaagaaaggtatcaaatat
caggcagccacacggcagggaaggatcattcattattcctggatcttagactgttgcaaa
gaaaaatgtcttcttcatttgcagcctaagtatattctctttctcgtggattttgcgagg
cacaaatttcctgaagagatcgactcatatgctgactatttctactgggacattgacatt
tctgacctcaagcagattttcagcaacatggacagagccgttgttgattcaaacatggta
catcactacaaaaagaagtactacacagatgagagattcttcttcttccagggttgctgt
gtctacttctaccatgcacccttggtgaatgcggactacaatgtaatatctgatcttgca
ctgaagagggtgaagcaggatcttaccatgcatggtggtgaagtttgtagcattcttgct
cctgctactcatttaattatagtttcagttctagaagcctacaattttgacatgttgtac
aagagcttccttccttctgagaggcgttatctacatgacaaaaggttgcatgttgtcagt
aacaagtggttggaagattcagtggaaaaacaaagaaagctgcctgaaaccacttacagc
cttaaaccagatacattagaggaaatagaagttgaaagaagtgaggaaactgttcagcct
tctaatcacaagcatgaggaaaatgaggagattgatagatcccatgttaatcatgtaccg
aagaaaaggggaaggccatctagtagtacctccagagccgcaaagcttgctcctagacca
gtccgaagaacacgacctagaaaaggaaatcaacatgcaaaaatagatgatgttgaacct
gaagaaagcgggcatggtgaaacaggccaagatgatcaaataccggacactgataacatc
tctaaaatggaacaagatggctttgacaaagaccaagtttctcctagaccagtccaaaga
tcaagggctaggagaggaaagcggcatgccaaaatcgattatggtggatctgaagaaaat
gatcctggtgcaacaggacaggatgatcaaaagttcgatgcagattacatctctaagata
gaagaagatagcaatgacagagaccagggatcccatccggctgctcctagggtgctccga
agatcaatgcctcaaagaggaaagcggcatgcaaaaatagattatggtgaatctgaagaa
agcagtcctggtgaaacagctcaagatgataagttggacgcagattccatctatagaatg
gaagaacataaccgtgacaaatatcaagaaccacctccaggtgcccagtttatcacattg
gatgagcaagaggccaaaggaatcaaaataagtaccatggagacaccaagcgaccggcag
catgaaatcaacgacgcagttgttagaacagggacttctgaggcaaccagtagcgcaaca
tgtgcgaagatggaacaaatggttgatccactgcacgcaatgcttctggacatgattcca
tcgcttaggcagacgaagacagaagatagtaacagggttcccgaagccaaagctgagaag
aatccaccttgggcaggaagttctacacctaactatgagtttccagtaccagaggcaacg
agttctgggcctaattctagcgttccagcaccacatgcaggaagttccacacagagtaac
ggggttccggccccagaccctactgctggtgctccaaagaagaaaaaggtcagctacaaa
gatgtcgccggtgaacttctgaaggattggtga

DBGET integrated database retrieval system