Oryza brachyantha (malo sina): 102719422
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Entry
102719422 CDS
T02995
Name
(RefSeq) death-inducer obliterator 1-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03015
mRNA surveillance pathway
obr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102719422
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102719422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102719422
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
102719422
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
102719422
NCBI-ProteinID:
XP_006661346
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Position
9:complement(11634822..11639546)
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AA seq
604 aa
AA seq
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MDPDGDGSFHRNEAISAVQDVDQYYGDDDDYDDLYNDVNVGDGFLQSSHPPPQSQPPPPP
VVQQAPPPVQQQQPPPLQAPPPQQPQQQQLQAPPSLPPPPPQRQPEKVHIPGVAAVPAPV
PDRPNPAHLPPQPQPPVAVAPPPPPHNQIQPGGGDGFHRQGGGNYGGGPIVVGNGGGGDG
PGGTTLFVGELHWWTTDADLEAELSKYGQVKEVRFFDEKASGKSKGYCQVDFYDPGAAAS
CKEGMNGHLFNGRPCVVAFASPHTVRRMGEAQVKNQQSMAQQNSGVQKGGRGGGAAGGPG
GAQVGGNYGGGRGGGGGGPGGGGGGGGGGNWGRGGGGMGGRGQPGNMRNRMGPVGGRGLM
GNGGMVAPPPPMLHPGGMLGQGFDPTGYGAAMGRMGGGFGGFPGGPGAAPFPGLMQPFPP
VVAPHVNPAFFGRGGGMGAGGVGMWPDPSMGGGWGGEEQSSYGDDAASDQQYGEGGSHGK
ERPPEREWSGASERRREREKDLPPPPDWPERRHRDERDVGRERERERERDRDRERERDRD
RERERDRDRERERYRDDRDRHGDYHRHGKRESDRNEDWDRGRSSGRRSRSREVDHSKRRR
MSPE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgacggcgacggctcgttccaccgcaacgaggccatctccgccgtccaggac
gtggaccagtactacggcgacgacgacgactacgacgacctctacaacgacgtcaacgtc
ggggacggcttcctccagtcgtcccacccgccgccgcagtcccagccgccccctccgccg
gttgtgcagcaggcgccgccgccggttcagcagcaacagccgcccccgttgcaggcgccg
ccgccgcagcagccgcagcagcaacagctgcaggcccccccttcgctcccgcctcctccg
ccgcagcggcagccggagaaggtgcacatccccggagttgcggctgtccccgcccccgtc
cccgaccggcccaacccagcgcatctcccgccgcagcctcagcctccggtggccgtggcg
cctccgccgcctccacataaccagatccagcctggaggaggcgacggtttccaccgccag
ggagggggaaactacggcggggggccgattgtggttgggaacggtgggggcggcgatggc
ccggggggcacgacgctcttcgtaggggagctccactggtggacgacggacgccgatcta
gaggcggagctgagcaagtatggacaggtcaaggaggtgaggttcttcgacgagaaggcg
agtgggaagtctaagggatactgccaggttgatttctatgaccctggagctgctgcctct
tgcaaagagggcatgaacggccacttgttcaatggacgcccctgtgttgtggcctttgca
tcgcctcacaccgtgcgccgcatgggggaagctcaggtgaagaaccagcaatcgatggct
cagcaaaactcaggtgtgcagaagggtggtagaggaggtggtgcagctggaggtccgggt
ggggctcaggttggtgggaattatggtggtggtcgtggaggcggaggaggtggaccgggt
ggtggtggaggtggaggtggtggtgggaactggggaaggggcggcggggggatggggggt
agaggtcaacctgggaatatgaggaatcggatgggtccggttggtggacgtggtctaatg
gggaacggagggatggtagctccaccaccacctatgcttcatcctgggggcatgttaggg
cagggctttgacccaactggatatggtgcagccatggggaggatgggtggcgggtttggc
gggttccctggtggacctggggctgctccattccctggcttaatgcagccattcccacct
gtagttgcacctcatgtaaacccagcattctttgggagaggaggtggtatgggtgccggt
ggtgttgggatgtggccagacccaagcatgggtggtggttggggtggggaggaacaatca
agctatggtgatgatgcagcatcagaccagcaatatggtgaaggtgggagccatggtaag
gagaggccgccagagagggaatggtcgggggcatcggagaggaggcgggagagggagaaa
gatttgcccccaccaccagactggccagagaggaggcaccgtgatgaacgggacgtgggt
cgggaacgggagcgggagagggagagagaccgagatagggaaagggaaagagaccgagac
agggaaagggaaagagaccgtgacagggagagggaacggtaccgggatgatagagatcgc
catggtgattatcacaggcatggtaagcgtgagtcagatcgcaatgaagactgggacagg
ggaagatcatctggacggcgtagcagatcaagggaggttgaccactcaaagcggcggcgg
atgtcgcctgagtaa
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