KEGG   Oryza brachyantha (malo sina): 102719422
Entry
102719422         CDS       T02995                                 
Name
(RefSeq) death-inducer obliterator 1-like
  KO
K14398  cleavage and polyadenylation specificity factor subunit 6/7
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03015  mRNA surveillance pathway
obr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102719422
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102719422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obr03019]
    102719422
Messenger RNA biogenesis [BR:obr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor Im (CFIm)
     102719422
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 102719422
NCBI-ProteinID: XP_006661346
LinkDB
Position
9:complement(11634822..11639546)
AA seq 604 aa
MDPDGDGSFHRNEAISAVQDVDQYYGDDDDYDDLYNDVNVGDGFLQSSHPPPQSQPPPPP
VVQQAPPPVQQQQPPPLQAPPPQQPQQQQLQAPPSLPPPPPQRQPEKVHIPGVAAVPAPV
PDRPNPAHLPPQPQPPVAVAPPPPPHNQIQPGGGDGFHRQGGGNYGGGPIVVGNGGGGDG
PGGTTLFVGELHWWTTDADLEAELSKYGQVKEVRFFDEKASGKSKGYCQVDFYDPGAAAS
CKEGMNGHLFNGRPCVVAFASPHTVRRMGEAQVKNQQSMAQQNSGVQKGGRGGGAAGGPG
GAQVGGNYGGGRGGGGGGPGGGGGGGGGGNWGRGGGGMGGRGQPGNMRNRMGPVGGRGLM
GNGGMVAPPPPMLHPGGMLGQGFDPTGYGAAMGRMGGGFGGFPGGPGAAPFPGLMQPFPP
VVAPHVNPAFFGRGGGMGAGGVGMWPDPSMGGGWGGEEQSSYGDDAASDQQYGEGGSHGK
ERPPEREWSGASERRREREKDLPPPPDWPERRHRDERDVGRERERERERDRDRERERDRD
RERERDRDRERERYRDDRDRHGDYHRHGKRESDRNEDWDRGRSSGRRSRSREVDHSKRRR
MSPE
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggatcccgacggcgacggctcgttccaccgcaacgaggccatctccgccgtccaggac
gtggaccagtactacggcgacgacgacgactacgacgacctctacaacgacgtcaacgtc
ggggacggcttcctccagtcgtcccacccgccgccgcagtcccagccgccccctccgccg
gttgtgcagcaggcgccgccgccggttcagcagcaacagccgcccccgttgcaggcgccg
ccgccgcagcagccgcagcagcaacagctgcaggcccccccttcgctcccgcctcctccg
ccgcagcggcagccggagaaggtgcacatccccggagttgcggctgtccccgcccccgtc
cccgaccggcccaacccagcgcatctcccgccgcagcctcagcctccggtggccgtggcg
cctccgccgcctccacataaccagatccagcctggaggaggcgacggtttccaccgccag
ggagggggaaactacggcggggggccgattgtggttgggaacggtgggggcggcgatggc
ccggggggcacgacgctcttcgtaggggagctccactggtggacgacggacgccgatcta
gaggcggagctgagcaagtatggacaggtcaaggaggtgaggttcttcgacgagaaggcg
agtgggaagtctaagggatactgccaggttgatttctatgaccctggagctgctgcctct
tgcaaagagggcatgaacggccacttgttcaatggacgcccctgtgttgtggcctttgca
tcgcctcacaccgtgcgccgcatgggggaagctcaggtgaagaaccagcaatcgatggct
cagcaaaactcaggtgtgcagaagggtggtagaggaggtggtgcagctggaggtccgggt
ggggctcaggttggtgggaattatggtggtggtcgtggaggcggaggaggtggaccgggt
ggtggtggaggtggaggtggtggtgggaactggggaaggggcggcggggggatggggggt
agaggtcaacctgggaatatgaggaatcggatgggtccggttggtggacgtggtctaatg
gggaacggagggatggtagctccaccaccacctatgcttcatcctgggggcatgttaggg
cagggctttgacccaactggatatggtgcagccatggggaggatgggtggcgggtttggc
gggttccctggtggacctggggctgctccattccctggcttaatgcagccattcccacct
gtagttgcacctcatgtaaacccagcattctttgggagaggaggtggtatgggtgccggt
ggtgttgggatgtggccagacccaagcatgggtggtggttggggtggggaggaacaatca
agctatggtgatgatgcagcatcagaccagcaatatggtgaaggtgggagccatggtaag
gagaggccgccagagagggaatggtcgggggcatcggagaggaggcgggagagggagaaa
gatttgcccccaccaccagactggccagagaggaggcaccgtgatgaacgggacgtgggt
cgggaacgggagcgggagagggagagagaccgagatagggaaagggaaagagaccgagac
agggaaagggaaagagaccgtgacagggagagggaacggtaccgggatgatagagatcgc
catggtgattatcacaggcatggtaagcgtgagtcagatcgcaatgaagactgggacagg
ggaagatcatctggacggcgtagcagatcaagggaggttgaccactcaaagcggcggcgg
atgtcgcctgagtaa

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