Oceanimonas sp. GK1: GU3_01985
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Entry
GU3_01985 CDS
T01667
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oce03016
]
GU3_01985 (trmE)
Transfer RNA biogenesis [BR:
oce03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
GU3_01985 (trmE)
Prokaryotic type
Methyltransferases
GU3_01985 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
Ras
ABC_tran
SRPRB
Roc
AAA_28
Arf
AAA_29
Zeta_toxin
AAA_18
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-ProteinID:
AEY00154
UniProt:
H2FYY9
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All DBs
Position
409418..410779
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AA seq
453 aa
AA seq
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MPNDTIVAQATAPGRGGVGIIRVSGPQAEAVAQAVLGRVPQVRYADYLPFKDEQGTVLDQ
GIALLFKGPHSFTGEDVLELQGHGGPVVLDMLVRRILALPGLRPARAGEFSERAFLNDKL
DLAQAEAIADLIEASSEQAARSALQSLQGEFSTRVHGLVEALTHLRIYVEAAIDFPDEEV
DFLSDGKIAGELYGIMDRLTEVQREARQGAIMREGMKVVIAGRPNAGKSSLLNALAGKES
AIVTDIAGTTRDVLREYIHLDGMPLHIIDTAGLREASDAVERIGIERAWAEIEQADRILF
MVDGTTTQARHPKDIWPDFVDRLPTHIGLTVVRNKADLTGEPLIVSSDGEHPVYPISART
GEGVEALKEHLKACMGFQGGGEGGFSARQRHLDALHHADQHLIMAREQLEVYMAGELVAE
ELRLAQEQLSQITGEFTSDDLLGRIFSSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacgacaccatcgtcgctcaggccaccgcccccggacgcggcggcgtcggcatt
attcgcgtctcgggcccccaggccgaggccgtggctcaagccgtgctcggccgcgtgccc
caagtacgttatgccgactacctgccgttcaaagatgagcagggcaccgtgctggaccag
ggcatcgccctgctgttcaagggcccccacagcttcaccggcgaagacgtgctcgagctc
cagggccacggcggcccggtggtgctggacatgctggtgcgccgcattctggccctgccc
ggcctgcgcccggcccgggccggcgagttcagcgagcgcgcctttctcaacgacaagctg
gatctggcccaggccgaggccattgccgacttgattgaagcctccagcgagcaggccgcc
cgttcggcgctgcagtcgctgcagggcgagttctccacccgggtacacggcctggtggaa
gcgctcactcacctgcgcatttacgtggaagcggccatcgactttcccgacgaggaagtg
gactttctgtccgacggcaaaattgccggcgagctctacggcatcatggaccggctcacc
gaggtacagcgggaagcccgccagggcgccatcatgcgcgagggcatgaaggtggtgatc
gccggccggcccaacgccggcaaatccagcctgcttaacgccctggccggcaaggaatcg
gccatcgtcaccgacatcgccggcaccacccgggacgtgctgcgggaatacattcacctg
gacggcatgcccctgcacatcatcgacaccgccggcctgcgcgaggccagcgacgcggtg
gaacgcatcggcatcgagcgggcctgggccgaaatagaacaggccgaccgcattctgttt
atggtggacggcaccaccacccaggcgcggcaccccaaggacatctggcccgacttcgtt
gaccggctgccgacccatattggcctcaccgtggtgcgcaacaaggcggatctcactggc
gagccgctcatcgtcagcagcgatggcgaacaccccgtgtaccctatctccgcccgcacc
ggcgaaggggtagaagcgctcaaggagcacctcaaggcctgcatgggctttcagggcggc
ggcgaaggcggcttcagcgcccgccagcgccatctggatgccctgcaccacgccgaccag
cacctgatcatggccagggaacaactggaggtgtacatggccggcgagctggtggcggag
gagctgcgcctggcccaggagcagctcagccagatcaccggcgagttcacctccgacgat
ctgctgggccggattttctcgtcgttctgcattgggaaatag
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