Afipia carboxidovorans OM5 (Goettingen): OCA5_c05900
Help
Entry
OCA5_c05900 CDS
T01617
Name
(GenBank) transcriptional regulator, LysR family
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AEI05314
UniProt:
B6JJQ7
LinkDB
All DBs
Position
complement(617196..618080)
Genome browser
AA seq
294 aa
AA seq
DB search
MTLEQLRIFVAVAEHEHMTRAAGTLNLTQSATSAAVAALEERYAIKLFDRVGRNIRLTDA
GRRFLVEARAMLARAAAAEAVLADLAGLTRGTLTLAASQTVGNYWLPPLIHRYRQRYPGI
DITLKIGNTEQVAAWVQEGVANLGFIEGEIENPGLSTAPIADDELALIVSASHPLAKCRT
PTAAQLKATKWVVREQGSGTRHVLEATLKGLGVAPDEIDIALELPSNESVRAAVLAGAGA
TIMSRIVVEGLVHSRALIELTVPMPARRFSLLHHKEHHITRAEQELQKLITEKK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcgaacagcttcgcattttcgttgccgttgcggagcacgagcacatgacccgt
gcggcgggcacgctgaatctgactcaatcagcgaccagcgcggccgtcgccgcacttgaa
gagcgctacgcgatcaagctgttcgaccgggtcggacgcaacatccggctgaccgacgcc
ggccgccgctttctggtcgaggcgcgcgcgatgctcgcccgcgcagcagccgcagaagcc
gttctcgccgatcttgccggactgactcgcggcacgctgacgcttgcagccagccagacc
gtcggaaattactggctgccgccgctgatccaccgctatcgccagcgctatcccggcatc
gacatcacgctgaagatcggcaacaccgagcaggttgcagcgtgggtgcaggaaggcgtt
gccaatctcggcttcatcgaaggcgagatcgagaaccccggcctgtccaccgcacccatt
gcggacgatgagcttgcgctgatcgtctccgcctcgcatccgctcgcaaagtgccggacg
ccgacagccgctcaactcaaggccaccaaatgggtggtgcgcgaacagggctccggcacg
cgccatgttctcgaggcgacgctcaaggggttaggtgtcgctcccgacgagatcgatatc
gcgctcgagttgccgtccaacgagtcggtgcgcgcggcggtgcttgcgggcgcgggcgcc
accatcatgtcgcgcatcgtggtcgagggcctcgtgcactcacgcgccctgatcgagctg
acggtgccgatgcccgcgcggcggttctcgctgctgcatcacaaggagcaccacatcacc
cgcgccgagcaggagttgcagaagctgatcacggagaagaagtaa
DBGET
integrated database retrieval system
